| 1 |
6406
|
aaronmk
|
U,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
|
| 2 |
6409
|
aaronmk
|
Barcode,"/_if[@name=""if specimen""]/cond/_exists",
|
| 3 |
7504
|
aaronmk
|
ID,"/_if[@name=""if specimen""]/cond/_exists",
|
| 4 |
7842
|
aaronmk
|
:U,"/_if[@name=""if specimen""]/else/source/shortname/_first/1",
|
| 5 |
6756
|
aaronmk
|
ID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/1",
|
| 6 |
|
|
Barcode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
|
| 7 |
|
|
Barcode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
|
| 8 |
|
|
ID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
|
| 9 |
7842
|
aaronmk
|
:U,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/then/_first/2",
|
| 10 |
6756
|
aaronmk
|
Barcode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
|
| 11 |
6432
|
aaronmk
|
Number,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 12 |
10571
|
aaronmk
|
Locnotes,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/2,
|
| 13 |
6432
|
aaronmk
|
Ecology,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/3,
|
| 14 |
7310
|
aaronmk
|
Detyy,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
| 15 |
|
|
cf,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/taxonfit",
|
| 16 |
4566
|
aaronmk
|
Colldd,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
| 17 |
|
|
Collmm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
| 18 |
|
|
Collyy,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
| 19 |
7716
|
aaronmk
|
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1,
|
| 20 |
7195
|
aaronmk
|
Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_first/2,
|
| 21 |
7610
|
aaronmk
|
Phenology,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/reproductivecondition,
|
| 22 |
4057
|
aaronmk
|
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
|
| 23 |
7198
|
aaronmk
|
Number,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/else",
|
| 24 |
6791
|
aaronmk
|
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
|
| 25 |
|
|
ID,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
|
| 26 |
7842
|
aaronmk
|
:U,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/name/_first/2",
|
| 27 |
|
|
:U,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/sourcename/name/_first/2/_split:[separator=""[,;] *""]/value",
|
| 28 |
3970
|
aaronmk
|
ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
|
| 29 |
7195
|
aaronmk
|
Number,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3",
|
| 30 |
10592
|
aaronmk
|
recordedBy,/location/locationevent/taxonoccurrence/collector_id/party/fullname,
|
| 31 |
6313
|
aaronmk
|
ID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 32 |
6314
|
aaronmk
|
Number,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 33 |
4834
|
aaronmk
|
ID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
|
| 34 |
5600
|
aaronmk
|
Detby,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname,
|
| 35 |
5657
|
aaronmk
|
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
| 36 |
|
|
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
| 37 |
7142
|
aaronmk
|
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family,
|
| 38 |
9882
|
aaronmk
|
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2/_filter_genus/value,
|
| 39 |
5657
|
aaronmk
|
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
|
| 40 |
|
|
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
|
| 41 |
5645
|
aaronmk
|
Detyy,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
| 42 |
4205
|
aaronmk
|
cf,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
|
| 43 |
4079
|
aaronmk
|
Barcode,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
|
| 44 |
7198
|
aaronmk
|
Number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/then",
|
| 45 |
10571
|
aaronmk
|
Locnotes,/location/locationnarrative/_merge/2,
|
| 46 |
3969
|
aaronmk
|
Ecology,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
|
| 47 |
5861
|
aaronmk
|
Lat,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
|
| 48 |
|
|
Long,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
|
| 49 |
5855
|
aaronmk
|
Country,/location/locationplace/*_id/place/country,
|
| 50 |
10574
|
aaronmk
|
county,/location/locationplace/*_id/place/county,
|
| 51 |
6179
|
aaronmk
|
Lat,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/latitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
|
| 52 |
|
|
Long,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/longitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
|
| 53 |
|
|
Country,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/country/_first/2,
|
| 54 |
10574
|
aaronmk
|
county,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,
|
| 55 |
10573
|
aaronmk
|
Majorarea,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,closest equivalent for Guyana/Suriname
|
| 56 |
|
|
Majorarea,/location/locationplace/*_id/place/stateprovince,closest equivalent for Guyana/Suriname
|
| 57 |
10592
|
aaronmk
|
Addcoll,,** No join mapping for recordedBy_additional ** additional collectors
|
| 58 |
4979
|
aaronmk
|
Alt,,** No join mapping for *Alt ** What is this?
|
| 59 |
|
|
Alt2,,** No join mapping for *Alt2 ** What is this?
|
| 60 |
10592
|
aaronmk
|
Collector,,** No join mapping for recordedBy_primary ** the primary collector
|
| 61 |
4979
|
aaronmk
|
Coorsyst,,** No join mapping for *Coorsyst **
|
| 62 |
10257
|
aaronmk
|
DateInfo,,** No non-empty join mapping for UNUSED#DateInfo **
|
| 63 |
4979
|
aaronmk
|
EW,,** No join mapping for *EW **
|
| 64 |
10574
|
aaronmk
|
Gazetteer,,** No join mapping for county.main ** closest equivalent for Guyana/Suriname
|
| 65 |
4979
|
aaronmk
|
NS,,** No join mapping for *NS **
|
| 66 |
10574
|
aaronmk
|
Newgazett,,"** No join mapping for county.alt ** only used in 1 row. only one of Gazetteer, Newgazett is ever populated."
|
| 67 |
10257
|
aaronmk
|
Prefix,,** No non-empty join mapping for UNUSED#Prefix **
|
| 68 |
|
|
Suffix,,** No non-empty join mapping for UNUSED#Suffix **
|
| 69 |
10209
|
aaronmk
|
row_num,,** No join mapping for *row_num **
|
