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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10609 over 11 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated for last backup
  bin 10599 over 11 years Aaron Marcuse-Kubitza bugfix: bin/import_times: filtering out the Sou...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 over 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10697 over 11 years Aaron Marcuse-Kubitza inputs/VegBank/observation_/test.xml.ref: updat...
  lib 10649 over 11 years Aaron Marcuse-Kubitza lib/sh/db.sh: mysqldump(): added create_db=1 fl...
  mappings 10616 over 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: regenerated from wiki. ad...
  planning 10667 over 11 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: rebalanced...
  schemas 10694 over 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: analytical_stem: synced wi...
  web 10670 over 11 years Aaron Marcuse-Kubitza bugfix: web/.htaccess: auto-detect dotpath in q...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.6 KB 10539 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: postgres-Linux: phppgadmin.c...
README.TXT 23.7 KB 10603 over 11 years Aaron Marcuse-Kubitza /README.TXT: Full database import: min disk spa...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 over 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10697 08/20/2013 08:49 PM Aaron Marcuse-Kubitza

inputs/VegBank/observation_/test.xml.ref: updated inserted row count
10696 08/20/2013 02:40 PM Aaron Marcuse-Kubitza

bugfix: inputs/VegBank/stemlocation_/map.csv: also join together taxonimportance_id, stemcount_id for aggregateOrganismObservationID so that the aggregateoccurrence pkeys match up with those imported from stemcount
10695 08/20/2013 01:40 PM Aaron Marcuse-Kubitza

bugfix: inputs/VegBank/stemcount_/map.csv: aggregateOrganismObservationID: prepend taxonimportance_id so that rows with only a taxonimportance entry (no stemcounts) will also have the required sourceaccessioncode
10694 08/20/2013 12:59 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_stem: synced with analytical_stem_view using sync_analytical_stem_to_view()
10693 08/20/2013 12:58 PM Aaron Marcuse-Kubitza

bugfix: schemas/vegbien.sql: sync_analytical_stem_to_view(): added re-creation of range_modeling_input view
10692 08/20/2013 11:40 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_stem_view: added aggregateOrganismObservationID (aggregateoccurrence.sourceaccessioncode) so aggregateoccurrences can be matched back up to their input rows (e.g. VegBank.stemcount)
10691 08/20/2013 10:31 AM Aaron Marcuse-Kubitza

inputs/VegBank/taxonobservation_/map.csv: plantname: remapped to DUPLICATE#of:plantconcept_plantname because this is an exact duplicate
10690 08/20/2013 10:24 AM Aaron Marcuse-Kubitza

bugfix: inputs/VegBank/taxonobservation_/map.csv: updated input column names for renamings in inputs/VegBank/vegbank.~.clean_up.sql
10689 08/20/2013 10:21 AM Aaron Marcuse-Kubitza

inputs/VegBank/taxonobservation_/map.csv: Species and lower ranks: remapped to EQUIV#to:plantname because these contain the taxonomic name at specific ranks, but plantname contains the taxonomic name of the plant itself, which is longer and populated more often
10688 08/19/2013 05:48 AM Aaron Marcuse-Kubitza

inputs/VegBank/taxonobservation_/create.sql: also join to plantname, since plantconcept.plantname may not always be populated when plantname.plantname is

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