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1
# Database import/export
2

    
3
import copy
4
import csv
5
import operator
6
import warnings
7
import sys
8

    
9
import csvs
10
import exc
11
import dicts
12
import sql
13
import sql_gen
14
import streams
15
import strings
16
import util
17

    
18
##### Exceptions
19

    
20
# Can't use built-in SyntaxError because it stringifies to only the first line
21
class SyntaxError(Exception): pass
22

    
23
##### Data cleanup
24

    
25
def table_nulls_mapped__set(db, table):
26
    assert isinstance(table, sql_gen.Table)
27
    sql.run_query(db, 'SELECT util.table_nulls_mapped__set('
28
        +sql_gen.table2regclass_text(db, table)+')')
29

    
30
def table_nulls_mapped__get(db, table):
31
    assert isinstance(table, sql_gen.Table)
32
    return sql.value(sql.run_query(db, 'SELECT util.table_nulls_mapped__get('
33
        +sql_gen.table2regclass_text(db, table)+')'))
34

    
35
null_strs = ['', '-', r'\N', 'NULL', 'UNKNOWN', 'nulo']
36

    
37
def cleanup_table(db, table):
38
    '''idempotent'''
39
    table = sql_gen.as_Table(table)
40
    assert sql.table_exists(db, table)
41
    
42
    if table_nulls_mapped__get(db, table): return # already cleaned up
43
    
44
    cols = filter(lambda c: sql_gen.is_text_col(db, c),
45
        sql.table_cols(db, table))
46
    try: pkey_col = sql.table_pkey_col(db, table)
47
    except sql.DoesNotExistException: pass
48
    else:
49
        try: cols.remove(pkey_col)
50
        except ValueError: pass
51
    if not cols: return
52
    
53
    db.log_debug('Cleaning up table', level=1.5)
54
    
55
    expr = 'trim(both from %s)'
56
    for null in null_strs: expr = 'nullif('+expr+', '+db.esc_value(null)+')'
57
    changes = [(v, sql_gen.CustomCode(expr % v.to_str(db))) for v in cols]
58
    
59
    while True:
60
        try:
61
            sql.update(db, table, changes, in_place=True, recover=True)
62
            break # successful
63
        except sql.NullValueException, e:
64
            db.log_debug('Caught exception: '+exc.str_(e))
65
            col, = e.cols
66
            sql.drop_not_null(db, col)
67
    
68
    db.log_debug('Vacuuming and reanalyzing table', level=1.5)
69
    sql.vacuum(db, table)
70
    
71
    table_nulls_mapped__set(db, table)
72

    
73
##### Error tracking
74

    
75
def track_data_error(db, errors_table, cols, value, error_code, error):
76
    '''
77
    @param errors_table If None, does nothing.
78
    '''
79
    if errors_table == None: return
80
    
81
    col_names = [c.name for c in cols]
82
    if not col_names: col_names = [None] # need at least one entry
83
    for col_name in col_names:
84
        try:
85
            sql.insert(db, errors_table, dict(column=col_name, value=value,
86
                error_code=error_code, error=error), recover=True,
87
                cacheable=True, log_level=4)
88
        except sql.DuplicateKeyException: pass
89

    
90
class ExcToErrorsTable(sql_gen.ExcToWarning):
91
    '''Handles an exception by saving it or converting it to a warning.'''
92
    def __init__(self, return_, srcs, errors_table, value=None):
93
        '''
94
        @param return_ See sql_gen.ExcToWarning
95
        @param srcs The column names for the errors table
96
        @param errors_table None|sql_gen.Table
97
        @param value The value (or an expression for it) that caused the error
98
        @pre The invalid value must be in a local variable "value" of type text.
99
        '''
100
        sql_gen.ExcToWarning.__init__(self, return_)
101
        
102
        value = sql_gen.as_Code(value)
103
        
104
        self.srcs = srcs
105
        self.errors_table = errors_table
106
        self.value = value
107
    
108
    def to_str(self, db):
109
        if not self.srcs or self.errors_table == None:
110
            return sql_gen.ExcToWarning.to_str(self, db)
111
        
112
        errors_table_cols = map(sql_gen.Col,
113
            ['column', 'value', 'error_code', 'error'])
114
        col_names_query = sql.mk_select(db, sql_gen.NamedValues('c', None,
115
            [[c.name] for c in self.srcs]), order_by=None)
116
        insert_query = sql.mk_insert_select(db, self.errors_table,
117
            errors_table_cols,
118
            sql_gen.Values(errors_table_cols).to_str(db))+';\n'
119
        return '''\
120
-- Save error in errors table.
121
DECLARE
122
    error_code text := SQLSTATE;
123
    error text := SQLERRM;
124
    value text := '''+self.value.to_str(db)+''';
125
    "column" text;
126
BEGIN
127
    -- Insert the value and error for *each* source column.
128
'''+strings.indent(sql_gen.RowExcIgnore(None, col_names_query, insert_query,
129
    row_var=errors_table_cols[0]).to_str(db))+'''
130
END;
131

    
132
'''+self.return_.to_str(db)
133

    
134
def data_exception_handler(*args, **kw_args):
135
    '''Handles a data_exception by saving it or converting it to a warning.
136
    For params, see ExcToErrorsTable().
137
    '''
138
    return sql_gen.data_exception_handler(ExcToErrorsTable(*args, **kw_args))
139

    
140
def cast(db, type_, col, errors_table=None):
141
    '''Casts an (unrenamed) column or value.
142
    If errors_table set and col has srcs, saves errors in errors_table (using
143
    col's srcs attr as source columns). Otherwise, converts errors to warnings.
144
    @param col str|sql_gen.Col|sql_gen.Literal
145
    @param errors_table None|sql_gen.Table|str
146
    '''
147
    col = sql_gen.as_Col(col)
148
    
149
    # Don't convert exceptions to warnings for user-supplied constants
150
    if isinstance(col, sql_gen.Literal): return sql_gen.Cast(type_, col)
151
    
152
    assert not isinstance(col, sql_gen.NamedCol)
153
    
154
    function_name = strings.first_word(type_)
155
    srcs = col.srcs
156
    save_errors = errors_table != None and srcs
157
    if save_errors: # function will be unique for the given srcs
158
        function_name = strings.ustr(sql_gen.FunctionCall(function_name,
159
            *map(sql_gen.to_name_only_col, srcs)))
160
    function = db.TempFunction(function_name)
161
    
162
    # Create function definition
163
    modifiers = 'STRICT'
164
    if not save_errors: modifiers = 'IMMUTABLE '+modifiers
165
    value_param = sql_gen.FunctionParam('value', 'anyelement')
166
    handler = data_exception_handler('RETURN NULL;\n', srcs, errors_table,
167
        value_param.name)
168
    body = sql_gen.CustomCode(handler.to_str(db, '''\
169
/* The explicit cast to the return type is needed to make the cast happen
170
inside the try block. (Implicit casts to the return type happen at the end
171
of the function, outside any block.) */
172
RETURN '''+sql_gen.Cast(type_, sql_gen.CustomCode('value')).to_str(db)+''';
173
'''))
174
    body.lang='plpgsql'
175
    sql.define_func(db, sql_gen.FunctionDef(function, type_, body,
176
        [value_param], modifiers))
177
    
178
    return sql_gen.FunctionCall(function, col)
179

    
180
def func_wrapper_exception_handler(db, return_, args, errors_table):
181
    '''Handles a function call's data_exceptions.
182
    Supports PL/Python functions.
183
    @param return_ See data_exception_handler()
184
    @param args [arg...] Function call's args
185
    @param errors_table See data_exception_handler()
186
    '''
187
    args = filter(sql_gen.has_srcs, args)
188
    
189
    srcs = sql_gen.cross_join_srcs(args)
190
    value = sql_gen.merge_not_null(db, ',', args)
191
    return sql_gen.NestedExcHandler(
192
        data_exception_handler(return_, srcs, errors_table, value)
193
        , sql_gen.plpythonu_error_handler
194
        )
195

    
196
def cast_temp_col(db, type_, col, errors_table=None):
197
    '''Like cast(), but creates a new column with the cast values if the input
198
    is a column.
199
    @return The new column or cast value
200
    '''
201
    def cast_(col): return cast(db, type_, col, errors_table)
202
    
203
    try: col = sql_gen.underlying_col(col)
204
    except sql_gen.NoUnderlyingTableException: return sql_gen.wrap(cast_, col)
205
    
206
    table = col.table
207
    new_col = sql_gen.suffixed_col(col, '::'+strings.first_word(type_))
208
    expr = cast_(col)
209
    
210
    # Add column
211
    new_typed_col = sql_gen.TypedCol(new_col.name, type_)
212
    sql.add_col(db, table, new_typed_col, comment=strings.urepr(col)+'::'+type_)
213
    new_col.name = new_typed_col.name # propagate any renaming
214
    
215
    sql.update(db, table, [(new_col, expr)], in_place=True, recover=True)
216
    
217
    return new_col
218

    
219
def errors_table(db, table, if_exists=True):
220
    '''
221
    @param if_exists If set, returns None if the errors table doesn't exist
222
    @return None|sql_gen.Table
223
    '''
224
    table = sql_gen.as_Table(table)
225
    if table.srcs != (): table = table.srcs[0]
226
    
227
    errors_table = sql_gen.suffixed_table(table, '.errors')
228
    if if_exists and not sql.table_exists(db, errors_table): return None
229
    return errors_table
230

    
231
def mk_errors_table(db, table):
232
    errors_table_ = errors_table(db, table, if_exists=False)
233
    if sql.table_exists(db, errors_table_, cacheable=False): return
234
    
235
    typed_cols = [
236
        sql_gen.TypedCol('column', 'text'),
237
        sql_gen.TypedCol('value', 'text'),
238
        sql_gen.TypedCol('error_code', 'character varying(5)', nullable=False),
239
        sql_gen.TypedCol('error', 'text', nullable=False),
240
        ]
241
    sql.create_table(db, errors_table_, typed_cols, has_pkey=False)
242
    index_cols = ['column', sql_gen.CustomCode('md5(value)'), 'error_code',
243
        sql_gen.CustomCode('md5(error)')]
244
    sql.add_index(db, index_cols, errors_table_, unique=True)
245

    
246
##### Import
247

    
248
row_num_col_def = copy.copy(sql.row_num_col_def)
249
row_num_col_def.name = 'row_num'
250
row_num_col_def.type = 'integer'
251

    
252
def append_csv(db, table, reader, header):
253
    def esc_name_(name): return sql.esc_name(db, name)
254
    
255
    def log(msg, level=1): db.log_debug(msg, level)
256
    
257
    # Wrap in standardizing stream
258
    cols_ct = len(header)
259
    stream = csvs.InputRewriter(streams.ProgressInputStream(csvs.StreamFilter(
260
        csvs.ColCtFilter(reader, cols_ct)), sys.stderr, msg='Read %d row(s)',
261
        n=1000))
262
    dialect = stream.dialect # use default dialect
263
    
264
    # Create COPY FROM statement
265
    if header == sql.table_col_names(db, table): cols_str = ''
266
    else: cols_str =' ('+(', '.join(map(esc_name_, header)))+')'
267
    copy_from = ('COPY '+table.to_str(db)+cols_str+' FROM STDIN DELIMITER '
268
        +db.esc_value(dialect.delimiter)+' NULL '+db.esc_value(''))
269
    assert not csvs.is_tsv(dialect)
270
    copy_from += ' CSV'
271
    if dialect.quoting != csv.QUOTE_NONE:
272
        quote_str = db.esc_value(dialect.quotechar)
273
        copy_from += ' QUOTE '+quote_str
274
        if dialect.doublequote: copy_from += ' ESCAPE '+quote_str
275
    copy_from += ';\n'
276
    
277
    log(copy_from, level=2)
278
    try: db.db.cursor().copy_expert(copy_from, stream)
279
    except Exception, e: sql.parse_exception(db, e, recover=True)
280

    
281
def import_csv(db, table, reader, header):
282
    def log(msg, level=1): db.log_debug(msg, level)
283
    
284
    # Get format info
285
    col_names = map(strings.to_unicode, header)
286
    for i, col in enumerate(col_names): # replace empty column names
287
        if col == '': col_names[i] = 'column_'+str(i)
288
    
289
    # Select schema and escape names
290
    def esc_name(name): return db.esc_name(name)
291
    
292
    typed_cols = [sql_gen.TypedCol(v, 'text') for v in col_names]
293
    typed_cols.insert(0, row_num_col_def)
294
    header.insert(0, row_num_col_def.name)
295
    reader = csvs.RowNumFilter(reader)
296
    
297
    log('Creating table')
298
    # Note that this is not rolled back if the import fails. Instead, it is
299
    # cached, and will not be re-run if the import is retried.
300
    sql.create_table(db, table, typed_cols, has_pkey=False, col_indexes=False)
301
    
302
    # Free memory used by deleted (rolled back) rows from any failed import.
303
    # This MUST be run so that the rows will be stored in inserted order, and
304
    # the row_num added after import will match up with the CSV's row order.
305
    sql.truncate(db, table)
306
    
307
    # Load the data
308
    def load(): append_csv(db, table, reader, header)
309
    sql.with_savepoint(db, load)
310
    
311
    cleanup_table(db, table)
312

    
313
def put(db, table, row, pkey_=None, row_ct_ref=None, on_error=exc.reraise):
314
    '''Recovers from errors.
315
    Only works under PostgreSQL (uses INSERT RETURNING).
316
    '''
317
    return put_table(db, table, [], row, row_ct_ref, on_error=on_error)
318

    
319
def get(db, table, row, pkey, row_ct_ref=None, create=False):
320
    '''Recovers from errors'''
321
    try:
322
        return sql.value(sql.select(db, table, [pkey], row, limit=1,
323
            recover=True))
324
    except StopIteration:
325
        if not create: raise
326
        return put(db, table, row, pkey, row_ct_ref) # insert new row
327

    
328
def is_func_result(col):
329
    return col.table.name.find('(') >= 0 and col.name == 'result'
330

    
331
def into_table_name(out_table, in_tables0, mapping, is_func):
332
    def in_col_str(in_col):
333
        in_col = sql_gen.remove_col_rename(in_col)
334
        if isinstance(in_col, sql_gen.Col):
335
            table = in_col.table
336
            if table == in_tables0:
337
                in_col = sql_gen.to_name_only_col(in_col)
338
            elif is_func_result(in_col): in_col = table # omit col name
339
        return strings.ustr(in_col)
340
    
341
    str_ = strings.ustr(out_table)
342
    if is_func:
343
        str_ += '('
344
        
345
        try: value_in_col = mapping['value']
346
        except KeyError:
347
            str_ += ', '.join((strings.ustr(k)+'='+in_col_str(v)
348
                for k, v in mapping.iteritems()))
349
        else: str_ += in_col_str(value_in_col)
350
        
351
        str_ += ')'
352
    else:
353
        out_col = 'rank'
354
        try: in_col = mapping[out_col]
355
        except KeyError: str_ += '_pkeys'
356
        else: # has a rank column, so hierarchical
357
            str_ += '['+strings.ustr(out_col)+'='+in_col_str(in_col)+']'
358
    return str_
359

    
360
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, default=None,
361
    col_defaults={}, on_error=exc.reraise):
362
    '''Recovers from errors.
363
    Only works under PostgreSQL (uses INSERT RETURNING).
364
    
365
    Warning: This function's normalizing algorithm does not support database
366
    triggers that populate fields covered by the unique constraint used to do
367
    the DISTINCT ON. Such fields must be populated by the mappings instead.
368
    (Other unique constraints and other non-unique fields are not affected by
369
    this restriction on triggers. Note that the primary key will normally not be
370
    the DISTINCT ON constraint, so trigger-populated natural keys are supported
371
    *unless* the input table contains duplicate rows for some generated keys.)
372
    
373
    Note that much of the complexity of the normalizing algorithm is due to
374
    PostgreSQL (and other DB systems) not having a native command for
375
    INSERT ON DUPLICATE SELECT (wiki.vegpath.org/INSERT_ON_DUPLICATE_SELECT).
376
    For PostgreSQL 9.1+, this can now be emulated using INSTEAD OF triggers.
377
    For earlier versions, you instead have to use this function.
378
    
379
    @param in_tables The main input table to select from, followed by a list of
380
        tables to join with it using the main input table's pkey
381
    @param mapping dict(out_table_col=in_table_col, ...)
382
        * out_table_col: str (*not* sql_gen.Col)
383
        * in_table_col: sql_gen.Col|literal-value
384
    @param default The *output* column to use as the pkey for missing rows.
385
        If this output column does not exist in the mapping, uses None.
386
    @param col_defaults Default values for required columns.
387
    @return sql_gen.Col Where the output pkeys are made available
388
    '''
389
    import psycopg2.extensions
390
    
391
    # Special handling for functions with hstore params
392
    if out_table == '_map':
393
        import psycopg2.extras
394
        psycopg2.extras.register_hstore(db.db)
395
        
396
        # Parse args
397
        try: value = mapping.pop('value')
398
        except KeyError: return None # value required
399
        
400
        mapping = dict([(k, sql_gen.get_value(v))
401
            for k, v in mapping.iteritems()]) # unwrap literal value
402
        mapping = dict(map=mapping, value=value) # non-value params -> hstore
403
    
404
    out_table = sql_gen.as_Table(out_table)
405
    
406
    def log_debug(msg): db.log_debug(msg, level=1.5)
407
    def col_ustr(str_):
408
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
409
    
410
    log_debug('********** New iteration **********')
411
    log_debug('Inserting these input columns into '+strings.as_tt(
412
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
413
    
414
    is_function = sql.function_exists(db, out_table)
415
    
416
    if is_function: row_ct_ref = None # only track inserted rows
417
    
418
    # Warn if inserting empty table rows
419
    if not mapping and not is_function: # functions with no args OK
420
        warnings.warn(UserWarning('Inserting empty table row(s)'))
421
    
422
    if is_function: out_pkey = 'result'
423
    else: out_pkey = sql.pkey_name(db, out_table, recover=True)
424
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
425
    
426
    in_tables_ = copy.copy(in_tables) # don't modify input!
427
    try: in_tables0 = in_tables_.pop(0) # first table is separate
428
    except IndexError: in_tables0 = None
429
    else:
430
        in_pkey = sql.pkey_name(db, in_tables0, recover=True)
431
        in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
432
    
433
    # Determine if can use optimization for only literal values
434
    is_literals = not reduce(operator.or_, map(sql_gen.is_table_col,
435
        mapping.values()), False)
436
    is_literals_or_function = is_literals or is_function
437
    
438
    if in_tables0 == None: errors_table_ = None
439
    else: errors_table_ = errors_table(db, in_tables0)
440
    
441
    # Create input joins from list of input tables
442
    input_joins = [in_tables0]+[sql_gen.Join(v,
443
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
444
    
445
    orig_mapping = mapping.copy()
446
    if mapping == {} and not is_function: # need >= one column for INSERT SELECT
447
        mapping = {out_pkey: None} # ColDict will replace with default value
448
    
449
    if not is_literals:
450
        into = sql_gen.as_Table(into_table_name(out_table, in_tables0, mapping,
451
            is_function))
452
        # Ensure into's out_pkey is different from in_pkey by prepending "out."
453
        if is_function: into_out_pkey = out_pkey
454
        else: into_out_pkey = 'out.'+out_pkey
455
        
456
        # Set column sources
457
        in_cols = filter(sql_gen.is_table_col, mapping.values())
458
        for col in in_cols:
459
            if col.table == in_tables0: col.set_srcs(sql_gen.src_self)
460
        
461
        log_debug('Joining together input tables into temp table')
462
        # Place in new table so don't modify input and for speed
463
        in_table = sql_gen.Table('in')
464
        mapping = dicts.join(mapping, sql.flatten(db, in_table, input_joins,
465
            in_cols, preserve=[in_pkey_col]))
466
        input_joins = [in_table]
467
        db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
468
    
469
    # Wrap mapping in a sql_gen.ColDict.
470
    # sql_gen.ColDict sanitizes both keys and values passed into it.
471
    # Do after applying dicts.join() because that returns a plain dict.
472
    mapping = sql_gen.ColDict(db, out_table, mapping)
473
    
474
    # Save all rows since in_table may have rows deleted
475
    if is_literals: pass
476
    elif is_function: full_in_table = in_table
477
    else:
478
        full_in_table = sql_gen.suffixed_table(in_table, '_full')
479
        sql.copy_table(db, in_table, full_in_table)
480
    
481
    pkeys_table_exists_ref = [False]
482
    def insert_into_pkeys(query, **kw_args):
483
        if pkeys_table_exists_ref[0]:
484
            sql.insert_select(db, into, [in_pkey, into_out_pkey], query,
485
                **kw_args)
486
        else:
487
            kw_args.setdefault('add_pkey_', True)
488
            
489
            sql.run_query_into(db, query, into=into, **kw_args)
490
            pkeys_table_exists_ref[0] = True
491
    
492
    def mk_main_select(joins, cols): return sql.mk_select(db, joins, cols)
493
    
494
    if is_literals: insert_in_table = None
495
    else:
496
        insert_in_table = in_table
497
        insert_in_tables = [insert_in_table]
498
    join_cols = sql_gen.ColDict(db, out_table)
499
    join_custom_cond = None
500
    
501
    exc_strs = set()
502
    def log_exc(e):
503
        e_str = exc.str_(e, first_line_only=True)
504
        log_debug('Caught exception: '+e_str)
505
        if e_str in exc_strs: # avoid infinite loops
506
            log_debug('Exception already seen, handler broken')
507
            on_error(e)
508
            remove_all_rows()
509
            return False
510
        else: exc_strs.add(e_str)
511
        return True
512
    
513
    ignore_all_ref = [False]
514
    def remove_all_rows():
515
        log_debug('Ignoring all rows')
516
        ignore_all_ref[0] = True # just return the default value column
517
    
518
    def handle_unknown_exc(e):
519
        log_debug('No handler for exception')
520
        on_error(e)
521
        remove_all_rows()
522
    
523
    def ensure_cond(cond, e, passed=False, failed=False):
524
        '''
525
        @param passed at least one row passed the constraint
526
        @param failed at least one row failed the constraint
527
        '''
528
        if is_literals: # we know the constraint was applied exactly once
529
            if passed: pass
530
            elif failed: remove_all_rows()
531
            else: raise NotImplementedError()
532
        else:
533
            if not is_function:
534
                out_table_cols = sql_gen.ColDict(db, out_table)
535
                out_table_cols.update(util.dict_subset_right_join({},
536
                    sql.table_col_names(db, out_table)))
537
            
538
            in_cols = []
539
            cond = strings.ustr(cond)
540
            orig_cond = cond
541
            cond = sql_gen.map_expr(db, cond, mapping, in_cols)
542
            if not is_function:
543
                cond = sql_gen.map_expr(db, cond, out_table_cols)
544
            
545
            log_debug('Ignoring rows that do not satisfy '+strings.as_tt(cond))
546
            cur = None
547
            if cond == sql_gen.false_expr:
548
                assert failed
549
                remove_all_rows()
550
            elif cond == sql_gen.true_expr: assert passed
551
            else:
552
                while True:
553
                    not_cond = sql_gen.NotCond(sql_gen.CustomCode(cond))
554
                    try:
555
                        cur = sql.delete(db, insert_in_table, not_cond)
556
                        break
557
                    except sql.DoesNotExistException, e:
558
                        if e.type != 'column': raise
559
                        
560
                        last_cond = cond
561
                        cond = sql_gen.map_expr(db, cond, {e.name: None})
562
                        if cond == last_cond: raise # not fixable
563
            
564
            # If any rows failed cond
565
            if failed or cur != None and cur.rowcount > 0:
566
                track_data_error(db, errors_table_,
567
                    sql_gen.cross_join_srcs(in_cols), None, e.cause.pgcode,
568
                    strings.ensure_newl(strings.ustr(e.cause.pgerror))
569
                    +'condition: '+orig_cond+'\ntranslated condition: '+cond)
570
    
571
    not_null_cols = set()
572
    def ignore(in_col, value, e):
573
        if sql_gen.is_table_col(in_col):
574
            in_col = sql_gen.with_table(in_col, insert_in_table)
575
            
576
            track_data_error(db, errors_table_, in_col.srcs, value,
577
                e.cause.pgcode, e.cause.pgerror)
578
            
579
            sql.add_index(db, in_col, insert_in_table) # enable fast filtering
580
            if value != None and in_col not in not_null_cols:
581
                log_debug('Replacing invalid value '
582
                    +strings.as_tt(strings.urepr(value))+' with NULL in column '
583
                    +strings.as_tt(in_col.to_str(db)))
584
                sql.update(db, insert_in_table, [(in_col, None)],
585
                    sql_gen.ColValueCond(in_col, value))
586
            else:
587
                log_debug('Ignoring rows with '+strings.as_tt(in_col.to_str(db))
588
                    +' = '+strings.as_tt(strings.urepr(value)))
589
                sql.delete(db, insert_in_table,
590
                    sql_gen.ColValueCond(in_col, value))
591
                if value == None: not_null_cols.add(in_col)
592
        else:
593
            assert isinstance(in_col, sql_gen.NamedCol)
594
            in_value = sql_gen.remove_col_rename(in_col)
595
            assert sql_gen.is_literal(in_value)
596
            if value == in_value.value:
597
                if value != None:
598
                    log_debug('Replacing invalid literal '
599
                        +strings.as_tt(in_col.to_str(db))+' with NULL')
600
                    mapping[in_col.name] = None
601
                else:
602
                    remove_all_rows()
603
            # otherwise, all columns were being ignore()d because the specific
604
            # column couldn't be identified, and this was not the invalid column
605
    
606
    if not is_literals:
607
        def insert_pkeys_table(which):
608
            return sql_gen.Table(sql_gen.concat(in_table.name,
609
                '_insert_'+which+'_pkeys'))
610
        insert_out_pkeys = insert_pkeys_table('out')
611
        insert_in_pkeys = insert_pkeys_table('in')
612
    
613
    def mk_func_call():
614
        args = dict(((k.name, v) for k, v in mapping.iteritems()))
615
        return sql_gen.FunctionCall(out_table, **args), args
616
    
617
    missing_msg = None
618
    
619
    # Do inserts and selects
620
    while True:
621
        has_joins = join_cols != {}
622
        
623
        if ignore_all_ref[0]: break # unrecoverable error, so don't do main case
624
        
625
        # Prepare to insert new rows
626
        if is_function:
627
            if is_literals:
628
                log_debug('Calling function')
629
                func_call, args = mk_func_call()
630
        else:
631
            log_debug('Trying to insert new rows')
632
            insert_args = dict(recover=True, cacheable=False)
633
            if has_joins:
634
                insert_args.update(dict(ignore=True))
635
            else:
636
                insert_args.update(dict(returning=out_pkey))
637
                if not is_literals:
638
                    insert_args.update(dict(into=insert_out_pkeys))
639
            main_select = mk_main_select([insert_in_table], [sql_gen.with_table(
640
                c, insert_in_table) for c in mapping.values()])
641
        
642
        try:
643
            cur = None
644
            if is_function:
645
                if is_literals:
646
                    cur = sql.select(db, fields=[func_call], recover=True,
647
                        cacheable=True)
648
                else:
649
                    log_debug('Defining wrapper function')
650
                    
651
                    func_call, args = mk_func_call()
652
                    func_call = sql_gen.NamedCol(into_out_pkey, func_call)
653
                    
654
                    # Create empty pkeys table so its row type can be used
655
                    insert_into_pkeys(sql.mk_select(db, input_joins,
656
                        [in_pkey_col, func_call], limit=0), add_pkey_=False,
657
                        recover=True)
658
                    result_type = db.col_info(sql_gen.Col(into_out_pkey,
659
                        into)).type
660
                    
661
                    ## Create error handling wrapper function
662
                    
663
                    wrapper = db.TempFunction(sql_gen.concat(into.name,
664
                        '_wrap'))
665
                    
666
                    select_cols = [in_pkey_col]+args.values()
667
                    row_var = copy.copy(sql_gen.row_var)
668
                    row_var.set_srcs([in_table])
669
                    in_pkey_var = sql_gen.Col(in_pkey, row_var)
670
                    
671
                    args = dict(((k, sql_gen.with_table(v, row_var))
672
                        for k, v in args.iteritems()))
673
                    func_call = sql_gen.FunctionCall(out_table, **args)
674
                    
675
                    def mk_return(result):
676
                        return sql_gen.ReturnQuery(sql.mk_select(db,
677
                            fields=[in_pkey_var, result], explain=False))
678
                    exc_handler = func_wrapper_exception_handler(db,
679
                        mk_return(sql_gen.Cast(result_type, None)),
680
                        args.values(), errors_table_)
681
                    
682
                    sql.define_func(db, sql_gen.FunctionDef(wrapper,
683
                        sql_gen.SetOf(into),
684
                        sql_gen.RowExcIgnore(sql_gen.RowType(in_table),
685
                            sql.mk_select(db, input_joins),
686
                            mk_return(func_call), exc_handler=exc_handler)
687
                        ))
688
                    wrapper_table = sql_gen.FunctionCall(wrapper)
689
                    
690
                    log_debug('Calling function')
691
                    insert_into_pkeys(sql.mk_select(db, wrapper_table,
692
                        order_by=None), recover=True, cacheable=False)
693
                    sql.add_pkey_or_index(db, into)
694
            else:
695
                cur = sql.insert_select(db, out_table, mapping.keys(),
696
                    main_select, **insert_args)
697
            break # insert successful
698
        except sql.MissingCastException, e:
699
            if not log_exc(e): break
700
            
701
            type_ = e.type
702
            if e.col == None: out_cols = mapping.keys()
703
            else: out_cols = [e.col]
704
            
705
            for out_col in out_cols:
706
                log_debug('Casting '+strings.as_tt(strings.repr_no_u(out_col))
707
                    +' input to '+strings.as_tt(type_))
708
                in_col = mapping[out_col]
709
                while True:
710
                    try:
711
                        mapping[out_col] = cast_temp_col(db, type_, in_col,
712
                            errors_table_)
713
                        break # cast successful
714
                    except sql.InvalidValueException, e:
715
                        if not log_exc(e): break
716
                        
717
                        ignore(in_col, e.value, e)
718
        except sql.DuplicateKeyException, e:
719
            if not log_exc(e): break
720
            
721
            # Different rows violating different unique constraints not
722
            # supported
723
            assert not join_cols
724
            
725
            join_custom_cond = e.cond
726
            if e.cond != None: ensure_cond(e.cond, e, passed=True)
727
            
728
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
729
            log_debug('Ignoring existing rows, comparing on these columns:\n'
730
                +strings.as_inline_table(join_cols, ustr=col_ustr))
731
            
732
            if is_literals:
733
                return sql.value(sql.select(db, out_table, [out_pkey_col],
734
                    join_cols, order_by=None))
735
            
736
            # Uniquify and filter input table to avoid (most) duplicate keys
737
            # (Additional duplicates may be added concurrently and will be
738
            # filtered out separately upon insert.)
739
            insert_in_table = sql.distinct_table(db, insert_in_table,
740
                join_cols.values(), [insert_in_table,
741
                sql_gen.Join(out_table, join_cols, sql_gen.filter_out, e.cond)])
742
            insert_in_tables.append(insert_in_table)
743
        except sql.NullValueException, e:
744
            if not log_exc(e): break
745
            
746
            out_col, = e.cols
747
            try: in_col = mapping[out_col]
748
            except KeyError, e:
749
                try: in_col = mapping[out_col] = col_defaults[out_col]
750
                except KeyError:
751
                    missing_msg = 'Missing mapping for NOT NULL column '+out_col
752
                    log_debug(missing_msg)
753
                    remove_all_rows()
754
            else: ignore(in_col, None, e)
755
        except sql.CheckException, e:
756
            if not log_exc(e): break
757
            
758
            ensure_cond(e.cond, e, failed=True)
759
        except sql.InvalidValueException, e:
760
            if not log_exc(e): break
761
            
762
            for in_col in mapping.values(): ignore(in_col, e.value, e)
763
        except psycopg2.extensions.TransactionRollbackError, e:
764
            if not log_exc(e): break
765
            # retry
766
        except sql.DatabaseErrors, e:
767
            if not log_exc(e): break
768
            
769
            handle_unknown_exc(e)
770
        # after exception handled, rerun loop with additional constraints
771
    
772
    # Resolve default value column
773
    if default != None:
774
        if ignore_all_ref[0]: mapping.update(orig_mapping) # use input cols
775
        try: default = mapping[default]
776
        except KeyError:
777
            db.log_debug('Default value column '
778
                +strings.as_tt(strings.repr_no_u(default))
779
                +' does not exist in mapping, falling back to None', level=2.1)
780
            default = None
781
        else: default = sql_gen.remove_col_rename(default)
782
    
783
    if missing_msg != None and default == None:
784
        warnings.warn(UserWarning(missing_msg))
785
        # not an error because sometimes the mappings include
786
        # extra tables which aren't used by the dataset
787
    
788
    # Handle unrecoverable errors
789
    if ignore_all_ref[0]:
790
        log_debug('Returning default: '+strings.as_tt(strings.urepr(default)))
791
        return default
792
    
793
    if cur != None and row_ct_ref != None and cur.rowcount >= 0:
794
        row_ct_ref[0] += cur.rowcount
795
    
796
    if is_literals: return sql.value(cur)
797
    
798
    if is_function: pass # pkeys table already created
799
    elif has_joins:
800
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols,
801
            custom_cond=join_custom_cond)]
802
        log_debug('Getting output table pkeys of existing/inserted rows')
803
        insert_into_pkeys(sql.mk_select(db, select_joins, [in_pkey_col,
804
            sql_gen.NamedCol(into_out_pkey, out_pkey_col)], order_by=None))
805
    else:
806
        sql.add_row_num(db, insert_out_pkeys) # for joining with input pkeys
807
        
808
        log_debug('Getting input table pkeys of inserted rows')
809
        # Note that mk_main_select() does not use ORDER BY. Instead, assume that
810
        # since the SELECT query is identical to the one used in INSERT SELECT,
811
        # its rows will be retrieved in the same order.
812
        sql.run_query_into(db, mk_main_select(input_joins, [in_pkey]),
813
            into=insert_in_pkeys)
814
        sql.add_row_num(db, insert_in_pkeys) # for joining with output pkeys
815
        
816
        assert sql.table_row_count(db, insert_out_pkeys) == sql.table_row_count(
817
            db, insert_in_pkeys)
818
        
819
        log_debug('Combining output and input pkeys in inserted order')
820
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
821
            {sql.row_num_col: sql_gen.join_same_not_null})]
822
        in_col = sql_gen.Col(in_pkey, insert_in_pkeys)
823
        out_col = sql_gen.NamedCol(into_out_pkey,
824
            sql_gen.Col(out_pkey, insert_out_pkeys))
825
        insert_into_pkeys(sql.mk_select(db, pkey_joins, [in_col, out_col],
826
            order_by=None))
827
        
828
        sql.empty_temp(db, [insert_out_pkeys, insert_in_pkeys])
829
    
830
    if not is_function: # is_function doesn't leave holes
831
        log_debug('Setting pkeys of missing rows to '
832
            +strings.as_tt(strings.urepr(default)))
833
        
834
        full_in_pkey_col = sql_gen.Col(in_pkey, full_in_table)
835
        if sql_gen.is_table_col(default):
836
            default = sql_gen.with_table(default, full_in_table)
837
        missing_rows_joins = [full_in_table, sql_gen.Join(into,
838
            {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
839
            # must use join_same_not_null or query will take forever
840
        
841
        insert_args = dict(order_by=None)
842
        if not sql.table_has_pkey(db, full_in_table): # in_table has duplicates
843
            insert_args.update(dict(distinct_on=[full_in_pkey_col]))
844
        
845
        insert_into_pkeys(sql.mk_select(db, missing_rows_joins,
846
            [full_in_pkey_col, sql_gen.NamedCol(into_out_pkey, default)],
847
            **insert_args))
848
    # otherwise, there is already an entry for every row
849
    
850
    sql.empty_temp(db, insert_in_tables+[full_in_table])
851
    
852
    srcs = []
853
    if is_function: srcs = sql_gen.cols_srcs(in_cols)
854
    return sql_gen.Col(into_out_pkey, into, srcs)
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