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Revision 11239

Added by Aaron Marcuse-Kubitza about 11 years ago

inputs/VegBank/verify/input_cols.unmapped.txt.run: remove unmapped join columns, since these would be included in the extract

View differences:

inputs/VegBank/verify/input_cols.unmapped.txt
1 
*stratumtype_id
2 
*stratum_id
3 1 
*taxonobservation_--plantname_id
4 2 
*taxonobservation_--plantconcept_id
5 3 
*taxonobservation_--stemlocation_id
......
32 30 
*plantconcept_--d_obscount
33 31 
*plantconcept_--d_currentaccepted
34 32 
*plantconcept_--plantconcept_accessioncode
35 
*Subkingdom
36 
*Superdivision
37 
*Division
38 
*Subdivision
39 
*Subclass
40 33 
EQUIV#to:plantname#Species
41 34 
EQUIV#to:plantname#Subspecies
42 35 
EQUIV#to:plantname#Variety
inputs/VegBank/verify/input_cols.unmapped.txt.run
7 7 
filter()
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{
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	echo_func
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	<"${top_file/.unmapped./.}" grep -F -e '*' -e '#'\
10 
	<"${top_file/.unmapped./.}" echo_run grep -F -e '--' -e '#'\
11 11 
	|sed 's/^OMIT#.*$/& # included as part of another table/' >"$top_file"
12 12 
}
13 13 

  		












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