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Revision 1140

Added by Aaron Marcuse-Kubitza over 12 years ago

mappings/Makefile: Generate DwC.self.specimens.csv from DwC-VegBIEN.specimens.csv for use in creating full via maps for inputs

View differences:

inputs/NYBG/test/DwC.specimens.xml.ref
2 2 
<DwC xmlns:dcterms="http://purl.org/dc/terms/">
3 3 
    <list id="0">
4 4 
        <institutionCode>NYBG</institutionCode>
5 
        <basisOfRecord>S</basisOfRecord>
6 
        <catalogNumber>00682023</catalogNumber>
7 
        <collectionCode>Herbarium</collectionCode>
8 
        <continent>South America</continent>
9 
        <country>Peru</country>
10 
        <county>Man&#250;</county>
11 
        <day>233</day>
5 12 
        <dcterms:modified>2005-2-22T14:47:32.000EST</dcterms:modified>
6 
        <collectionCode>Herbarium</collectionCode>
7 
        <catalogNumber>00682023</catalogNumber>
8 
        <scientificName>Cariniana estrellensis (Raddi) Kuntze</scientificName>
9 
        <basisOfRecord>S</basisOfRecord>
13 
        <eventDate>1984-08-20</eventDate>
14 
        <family>Lecythidaceae</family>
15 
        <fieldNotes>plant fungus: with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</fieldNotes>
16 
        <fieldNumber>9877</fieldNumber>
17 
        <genus>Cariniana</genus>
18 
        <habitat>Floodplain forest</habitat>
10 19 
        <kingdom>Plantae</kingdom>
20 
        <maximumElevationInMeters>350</maximumElevationInMeters>
21 
        <minimumElevationInMeters>350</minimumElevationInMeters>
22 
        <occurrenceID>816590</occurrenceID>
11 23 
        <phylum>Magnoliophyta (flowering plants)</phylum>
12 
        <family>Lecythidaceae</family>
13 
        <genus>Cariniana</genus>
24 
        <recordedBy>R. B. Foster</recordedBy>
25 
        <scientificName>Cariniana estrellensis (Raddi) Kuntze</scientificName>
26 
        <scientificNameAuthorship>(Raddi) Kuntze</scientificNameAuthorship>
14 27 
        <specificEpithet>estrellensis</specificEpithet>
15 
        <scientificNameAuthorship>(Raddi) Kuntze</scientificNameAuthorship>
16 
        <fieldNumber>9877</fieldNumber>
17 
        <recordedBy>R. B. Foster</recordedBy>
18 
        <eventDate>1984-08-20</eventDate>
19 
        <day>233</day>
20 
        <continent>South America</continent>
21 
        <country>Peru</country>
22 28 
        <stateProvince>Madre de Dios</stateProvince>
23 
        <county>Man&#250;</county>
29 
        <verbatimLatitude>-11.80000000</verbatimLatitude>
24 30 
        <verbatimLocality>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</verbatimLocality>
25 31 
        <verbatimLongitude>-71.40000000</verbatimLongitude>
26 
        <verbatimLatitude>-11.80000000</verbatimLatitude>
27 
        <minimumElevationInMeters>350</minimumElevationInMeters>
28 
        <maximumElevationInMeters>350</maximumElevationInMeters>
29 
        <habitat>Floodplain forest</habitat>
30 
        <fieldNotes>plant fungus: with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</fieldNotes>
31 
        <occurrenceID>816590</occurrenceID>
32 32 
    </list>
33 33 
    <list id="1">
34 34 
        <institutionCode>NYBG</institutionCode>
35 
        <basisOfRecord>S</basisOfRecord>
36 
        <catalogNumber>200996</catalogNumber>
37 
        <collectionCode>Herbarium</collectionCode>
38 
        <continent>Central America</continent>
39 
        <country>Belize</country>
40 
        <day>17</day>
35 41 
        <dcterms:modified>2004-1-13T00:00EST</dcterms:modified>
36 
        <collectionCode>Herbarium</collectionCode>
37 
        <catalogNumber>200996</catalogNumber>
38 
        <scientificName>Scrophulariaceae</scientificName>
39 
        <basisOfRecord>S</basisOfRecord>
42 
        <eventDate>1994-01-17</eventDate>
43 
        <family>Scrophulariaceae</family>
44 
        <fieldNumber>545</fieldNumber>
40 45 
        <kingdom>Plantae</kingdom>
46 
        <maximumElevationInMeters>15</maximumElevationInMeters>
47 
        <minimumElevationInMeters>15</minimumElevationInMeters>
48 
        <occurrenceID>220541</occurrenceID>
41 49 
        <phylum>Magnoliophyta (flowering plants)</phylum>
42 
        <family>Scrophulariaceae</family>
43 
        <fieldNumber>545</fieldNumber>
44 50 
        <recordedBy>J. B. Walker</recordedBy>
45 
        <eventDate>1994-01-17</eventDate>
46 
        <day>17</day>
47 
        <continent>Central America</continent>
48 
        <country>Belize</country>
51 
        <scientificName>Scrophulariaceae</scientificName>
49 52 
        <stateProvince>Belize District</stateProvince>
53 
        <verbatimLatitude>17.40000000</verbatimLatitude>
50 54 
        <verbatimLocality>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</verbatimLocality>
51 55 
        <verbatimLongitude>-88.50000000</verbatimLongitude>
52 
        <verbatimLatitude>17.40000000</verbatimLatitude>
53 
        <minimumElevationInMeters>15</minimumElevationInMeters>
54 
        <maximumElevationInMeters>15</maximumElevationInMeters>
55 
        <occurrenceID>220541</occurrenceID>
56 56 
    </list>
57 57 
</DwC>
inputs/NYBG/maps/DwC.specimens.full.csv
1 
"NYBG-DwC:nybg_raw","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionCode=$/_ignore/inLabel]/","Comments"
2 
"key",,
3 
"DateLastModified","dcterms:modified",
4 
"InstitutionCode",,
5 
"CollectionCode","collectionCode",
6 
"CatalogNumber","catalogNumber",
7 
"ScientificName","scientificName",
8 
"BasisOfRecord","basisOfRecord",
9 
"Kingdom","kingdom",
10 
"Phylum","phylum",
11 
"Class","class",
12 
"Order","order",
13 
"Family","family",
14 
"Genus","genus",
15 
"Species","specificEpithet",
16 
"Subspecies","infraspecificEpithet",
17 
"ScientificNameAuthor","scientificNameAuthorship",
18 
"IdentifiedBy","identifiedBy",
19 
"YearIdentified","dateIdentified/_alt/2/_date/year",
20 
"MonthIdentified","dateIdentified/_alt/2/_date/month",
21 
"DayIdentified","dateIdentified/_alt/2/_date/day",
22 
"IdentifiedDate",,
23 
"TypeStatus","typeStatus",
24 
"CollectorNumber","recordNumber",
25 
"FieldNumber","fieldNumber",
26 
"Collector","recordedBy",
27 
"YearCollected","eventDate/_alt/2/_date/year",
28 
"MonthCollected","eventDate/_alt/2/_date/month",
29 
"DayCollected","eventDate/_alt/2/_date/day",
30 
"CollectedDate",,
31 
"JulianDay","day",
32 
"TimeOfDay","eventTime",
33 
"ContinentOcean","continent",
34 
"Country","country",
35 
"StateProvince","stateProvince",
36 
"County","county",
37 
"Locality","verbatimLocality",
38 
"Longitude","verbatimLongitude",
39 
"Latitude","verbatimLatitude",
40 
"CoordinatePrecision","coordinatePrecision/_noCV/value",
41 
"BoundingBox","footprintWKT",
42 
"MinimumElevation","minimumElevationInMeters",
43 
"MaximumElevation","maximumElevationInMeters",
44 
"MinimumDepth","minimumDepthInMeters",
45 
"MaximumDepth","maximumDepthInMeters",
46 
"Sex","sex",
47 
"PreparationType","preparations",
48 
"IndividualCount","individualCount",
49 
"PreviousCatalogNumber","previousIdentifications","?"
50 
"RelationshipType","relationshipOfResource",
51 
"RelatedCatalogItem","relatedResourceID",
52 
"Notes","fieldNotes/_merge/1",
53 
"Habitat","habitat/_merge/1",
54 
"PlantFungusDescription","fieldNotes/_merge/2/_label[label=""plant fungus""]/value",
55 
"Substrate","bien.substrate",
56 
"Vegetation","habitat/_merge/2",
57 
"UniqueNYInternalRecordNumber","occurrenceID",
1 
NYBG-DwC:nybg_raw,"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionCode=$/_ignore/inLabel]/",Comments
2 
acceptedNameUsage,acceptedNameUsage
3 
acceptedNameUsageID,acceptedNameUsageID
4 
associatedMedia,associatedMedia
5 
associatedOccurrences,associatedOccurrences
6 
associatedReferences,associatedReferences
7 
associatedSequences,associatedSequences
8 
associatedTaxa,associatedTaxa
9 
BasisOfRecord,basisOfRecord,
10 
basisOfRecord,basisOfRecord
11 
bed,bed
12 
behavior,behavior
13 
Substrate,bien.substrate,
14 
bien.substrate,bien.substrate
15 
CatalogNumber,catalogNumber,
16 
catalogNumber,catalogNumber
17 
Class,class,
18 
class,class
19 
CollectionCode,collectionCode,
20 
collectionCode,collectionCode
21 
collectionID,collectionID
22 
ContinentOcean,continent,
23 
continent,continent
24 
coordinatePrecision,coordinatePrecision
25 
CoordinatePrecision,coordinatePrecision/_noCV/value,
26 
coordinatePrecision/_noCV/value,coordinatePrecision/_noCV/value
27 
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters
28 
Country,country,
29 
country,country
30 
countryCode,countryCode
31 
County,county,
32 
county,county
33 
dataGeneralizations,dataGeneralizations
34 
datasetID,datasetID
35 
datasetName,datasetName
36 
dateIdentified,dateIdentified
37 
DayIdentified,dateIdentified/_alt/2/_date/day,
38 
dateIdentified/_alt/2/_date/day,dateIdentified/_alt/2/_date/day
39 
MonthIdentified,dateIdentified/_alt/2/_date/month,
40 
dateIdentified/_alt/2/_date/month,dateIdentified/_alt/2/_date/month
41 
YearIdentified,dateIdentified/_alt/2/_date/year,
42 
dateIdentified/_alt/2/_date/year,dateIdentified/_alt/2/_date/year
43 
JulianDay,day,
44 
day,day
45 
dcterms:accessRights,dcterms:accessRights
46 
dcterms:bibliographicCitation,dcterms:bibliographicCitation
47 
dcterms:language,dcterms:language
48 
DateLastModified,dcterms:modified,
49 
dcterms:modified,dcterms:modified
50 
dcterms:references,dcterms:references
51 
dcterms:rights,dcterms:rights
52 
dcterms:rightsHolder,dcterms:rightsHolder
53 
dcterms:type,dcterms:type
54 
decimalLatitude,decimalLatitude
55 
decimalLongitude,decimalLongitude
56 
disposition,disposition
57 
dynamicProperties,dynamicProperties
58 
earliestAgeOrLowestStage,earliestAgeOrLowestStage
59 
earliestEonOrLowestEonothem,earliestEonOrLowestEonothem
60 
earliestEpochOrLowestSeries,earliestEpochOrLowestSeries
61 
earliestEraOrLowestErathem,earliestEraOrLowestErathem
62 
earliestPeriodOrLowestSystem,earliestPeriodOrLowestSystem
63 
endDayOfYear,endDayOfYear
64 
establishmentMeans,establishmentMeans
65 
eventDate,eventDate
66 
DayCollected,eventDate/_alt/2/_date/day,
67 
eventDate/_alt/2/_date/day,eventDate/_alt/2/_date/day
68 
MonthCollected,eventDate/_alt/2/_date/month,
69 
eventDate/_alt/2/_date/month,eventDate/_alt/2/_date/month
70 
YearCollected,eventDate/_alt/2/_date/year,
71 
eventDate/_alt/2/_date/year,eventDate/_alt/2/_date/year
72 
eventID,eventID
73 
eventRemarks,eventRemarks
74 
TimeOfDay,eventTime,
75 
eventTime,eventTime
76 
Family,family,
77 
family,family
78 
fieldNotes,fieldNotes
79 
Notes,fieldNotes/_merge/1,
80 
fieldNotes/_merge/1,fieldNotes/_merge/1
81 
PlantFungusDescription,"fieldNotes/_merge/2/_label[label=""plant fungus""]/value",
82 
"fieldNotes/_merge/2/_label[label=""plant fungus""]/value","fieldNotes/_merge/2/_label[label=""plant fungus""]/value"
83 
FieldNumber,fieldNumber,
84 
fieldNumber,fieldNumber
85 
footprintSRS,footprintSRS
86 
footprintSpatialFit,footprintSpatialFit
87 
BoundingBox,footprintWKT,
88 
footprintWKT,footprintWKT
89 
formation,formation
90 
Genus,genus,
91 
genus,genus
92 
geodeticDatum,geodeticDatum
93 
geologicalContextID,geologicalContextID
94 
georeferenceProtocol,georeferenceProtocol
95 
georeferenceRemarks,georeferenceRemarks
96 
georeferenceSources,georeferenceSources
97 
georeferenceVerificationStatus,georeferenceVerificationStatus
98 
georeferencedBy,georeferencedBy
99 
georeferencedDate,georeferencedDate
100 
group,group
101 
habitat,habitat
102 
Habitat,habitat/_merge/1,
103 
habitat/_merge/1,habitat/_merge/1
104 
Vegetation,habitat/_merge/2,
105 
habitat/_merge/2,habitat/_merge/2
106 
higherClassification,higherClassification
107 
higherGeography,higherGeography
108 
higherGeographyID,higherGeographyID
109 
highestBiostratigraphicZone,highestBiostratigraphicZone
110 
identificationID,identificationID
111 
identificationQualifier,identificationQualifier
112 
identificationReferences,identificationReferences
113 
identificationRemarks,identificationRemarks
114 
identificationVerificationStatus,identificationVerificationStatus
115 
IdentifiedBy,identifiedBy,
116 
identifiedBy,identifiedBy
117 
IndividualCount,individualCount,
118 
individualCount,individualCount
119 
individualID,individualID
120 
informationWithheld,informationWithheld
121 
Subspecies,infraspecificEpithet,
122 
infraspecificEpithet,infraspecificEpithet
123 
institutionCode,institutionCode
124 
institutionID,institutionID
125 
island,island
126 
islandGroup,islandGroup
127 
Kingdom,kingdom,
128 
kingdom,kingdom
129 
latestAgeOrHighestStage,latestAgeOrHighestStage
130 
latestEonOrHighestEonothem,latestEonOrHighestEonothem
131 
latestEpochOrHighestSeries,latestEpochOrHighestSeries
132 
latestEraOrHighestErathem,latestEraOrHighestErathem
133 
latestPeriodOrHighestSystem,latestPeriodOrHighestSystem
134 
lifeStage,lifeStage
135 
lithostratigraphicTerms,lithostratigraphicTerms
136 
locality,locality
137 
locationAccordingTo,locationAccordingTo
138 
locationID,locationID
139 
locationRemarks,locationRemarks
140 
lowestBiostratigraphicZone,lowestBiostratigraphicZone
141 
MaximumDepth,maximumDepthInMeters,
142 
maximumDepthInMeters,maximumDepthInMeters
143 
maximumDistanceAboveSurfaceInMeters,maximumDistanceAboveSurfaceInMeters
144 
MaximumElevation,maximumElevationInMeters,
145 
maximumElevationInMeters,maximumElevationInMeters
146 
measurementAccuracy,measurementAccuracy
147 
measurementDeterminedBy,measurementDeterminedBy
148 
measurementDeterminedDate,measurementDeterminedDate
149 
measurementID,measurementID
150 
measurementMethod,measurementMethod
151 
measurementRemarks,measurementRemarks
152 
measurementType,measurementType
153 
measurementUnit,measurementUnit
154 
measurementValue,measurementValue
155 
member,member
156 
MinimumDepth,minimumDepthInMeters,
157 
minimumDepthInMeters,minimumDepthInMeters
158 
minimumDistanceAboveSurfaceInMeters,minimumDistanceAboveSurfaceInMeters
159 
MinimumElevation,minimumElevationInMeters,
160 
minimumElevationInMeters,minimumElevationInMeters
161 
month,month
162 
municipality,municipality
163 
nameAccordingTo,nameAccordingTo
164 
nameAccordingToID,nameAccordingToID
165 
namePublishedIn,namePublishedIn
166 
namePublishedInID,namePublishedInID
167 
namePublishedInYear,namePublishedInYear
168 
nomenclaturalCode,nomenclaturalCode
169 
nomenclaturalStatus,nomenclaturalStatus
170 
UniqueNYInternalRecordNumber,occurrenceID,
171 
occurrenceID,occurrenceID
172 
occurrenceRemarks,occurrenceRemarks
173 
occurrenceStatus,occurrenceStatus
174 
Order,order,
175 
order,order
176 
originalNameUsage,originalNameUsage
177 
originalNameUsageID,originalNameUsageID
178 
otherCatalogNumbers,otherCatalogNumbers
179 
ownerInstitutionCode,ownerInstitutionCode
180 
parentNameUsage,parentNameUsage
181 
parentNameUsageID,parentNameUsageID
182 
Phylum,phylum,
183 
phylum,phylum
184 
pointRadiusSpatialFit,pointRadiusSpatialFit
185 
PreparationType,preparations,
186 
preparations,preparations
187 
PreviousCatalogNumber,previousIdentifications,?
188 
previousIdentifications,previousIdentifications
189 
CollectorNumber,recordNumber,
190 
recordNumber,recordNumber
191 
Collector,recordedBy,
192 
recordedBy,recordedBy
193 
RelatedCatalogItem,relatedResourceID,
194 
relatedResourceID,relatedResourceID
195 
relationshipAccordingTo,relationshipAccordingTo
196 
relationshipEstablishedDate,relationshipEstablishedDate
197 
RelationshipType,relationshipOfResource,
198 
relationshipOfResource,relationshipOfResource
199 
relationshipRemarks,relationshipRemarks
200 
reproductiveCondition,reproductiveCondition
201 
resourceID,resourceID
202 
resourceRelationshipID,resourceRelationshipID
203 
samplingEffort,samplingEffort
204 
samplingProtocol,samplingProtocol
205 
ScientificName,scientificName,
206 
scientificName,scientificName
207 
ScientificNameAuthor,scientificNameAuthorship,
208 
scientificNameAuthorship,scientificNameAuthorship
209 
scientificNameID,scientificNameID
210 
Sex,sex,
211 
sex,sex
212 
Species,specificEpithet,
213 
specificEpithet,specificEpithet
214 
startDayOfYear,startDayOfYear
215 
StateProvince,stateProvince,
216 
stateProvince,stateProvince
217 
subgenus,subgenus
218 
taxonConceptID,taxonConceptID
219 
taxonID,taxonID
220 
taxonRank,taxonRank
221 
taxonRemarks,taxonRemarks
222 
taxonomicStatus,taxonomicStatus
223 
TypeStatus,typeStatus,
224 
typeStatus,typeStatus
225 
verbatimCoordinateSystem,verbatimCoordinateSystem
226 
verbatimCoordinates,verbatimCoordinates
227 
verbatimDepth,verbatimDepth
228 
verbatimElevation,verbatimElevation
229 
verbatimEventDate,verbatimEventDate
230 
Latitude,verbatimLatitude,
231 
verbatimLatitude,verbatimLatitude
232 
Locality,verbatimLocality,
233 
verbatimLocality,verbatimLocality
234 
Longitude,verbatimLongitude,
235 
verbatimLongitude,verbatimLongitude
236 
verbatimSRS,verbatimSRS
237 
verbatimTaxonRank,verbatimTaxonRank
238 
vernacularName,vernacularName
239 
waterBody,waterBody
240 
year,year
241 
CollectedDate,,
242 
IdentifiedDate,,
243 
InstitutionCode,,
244 
key,,
inputs/NYBG-CSV/test/DwC.specimens.xml.ref
2 2 
<DwC xmlns:dcterms="http://purl.org/dc/terms/">
3 3 
    <list id="0">
4 4 
        <institutionCode>NYBG</institutionCode>
5 
        <basisOfRecord>S</basisOfRecord>
6 
        <catalogNumber>00682023</catalogNumber>
7 
        <collectionCode>Herbarium</collectionCode>
8 
        <continent>South America</continent>
9 
        <country>Peru</country>
10 
        <county>Man&#250;</county>
11 
        <day>233</day>
5 12 
        <dcterms:modified>2005-2-22T14:47:32.000EST</dcterms:modified>
6 
        <collectionCode>Herbarium</collectionCode>
7 
        <catalogNumber>00682023</catalogNumber>
8 
        <scientificName>Cariniana estrellensis (Raddi) Kuntze</scientificName>
9 
        <basisOfRecord>S</basisOfRecord>
13 
        <eventDate>1984-08-20</eventDate>
14 
        <family>Lecythidaceae</family>
15 
        <fieldNotes>plant fungus: with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</fieldNotes>
16 
        <fieldNumber>9877</fieldNumber>
17 
        <genus>Cariniana</genus>
18 
        <habitat>Floodplain forest</habitat>
10 19 
        <kingdom>Plantae</kingdom>
20 
        <maximumElevationInMeters>350</maximumElevationInMeters>
21 
        <minimumElevationInMeters>350</minimumElevationInMeters>
22 
        <occurrenceID>816590</occurrenceID>
11 23 
        <phylum>Magnoliophyta (flowering plants)</phylum>
12 
        <family>Lecythidaceae</family>
13 
        <genus>Cariniana</genus>
24 
        <recordedBy>R. B. Foster</recordedBy>
25 
        <scientificName>Cariniana estrellensis (Raddi) Kuntze</scientificName>
26 
        <scientificNameAuthorship>(Raddi) Kuntze</scientificNameAuthorship>
14 27 
        <specificEpithet>estrellensis</specificEpithet>
15 
        <scientificNameAuthorship>(Raddi) Kuntze</scientificNameAuthorship>
16 
        <fieldNumber>9877</fieldNumber>
17 
        <recordedBy>R. B. Foster</recordedBy>
18 
        <eventDate>1984-08-20</eventDate>
19 
        <day>233</day>
20 
        <continent>South America</continent>
21 
        <country>Peru</country>
22 28 
        <stateProvince>Madre de Dios</stateProvince>
23 
        <county>Man&#250;</county>
29 
        <verbatimLatitude>-11.80</verbatimLatitude>
24 30 
        <verbatimLocality>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</verbatimLocality>
25 31 
        <verbatimLongitude>-71.40</verbatimLongitude>
26 
        <verbatimLatitude>-11.80</verbatimLatitude>
27 
        <minimumElevationInMeters>350</minimumElevationInMeters>
28 
        <maximumElevationInMeters>350</maximumElevationInMeters>
29 
        <habitat>Floodplain forest</habitat>
30 
        <fieldNotes>plant fungus: with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</fieldNotes>
31 
        <occurrenceID>816590</occurrenceID>
32 32 
    </list>
33 33 
    <list id="1">
34 34 
        <institutionCode>NYBG</institutionCode>
35 
        <basisOfRecord>S</basisOfRecord>
36 
        <catalogNumber>200996</catalogNumber>
37 
        <collectionCode>Herbarium</collectionCode>
38 
        <continent>Central America</continent>
39 
        <country>Belize</country>
40 
        <day>17</day>
35 41 
        <dcterms:modified>2004-1-13T00:00EST</dcterms:modified>
36 
        <collectionCode>Herbarium</collectionCode>
37 
        <catalogNumber>200996</catalogNumber>
38 
        <scientificName>Scrophulariaceae</scientificName>
39 
        <basisOfRecord>S</basisOfRecord>
42 
        <eventDate>1994-01-17</eventDate>
43 
        <family>Scrophulariaceae</family>
44 
        <fieldNumber>545</fieldNumber>
40 45 
        <kingdom>Plantae</kingdom>
46 
        <maximumElevationInMeters>15</maximumElevationInMeters>
47 
        <minimumElevationInMeters>15</minimumElevationInMeters>
48 
        <occurrenceID>220541</occurrenceID>
41 49 
        <phylum>Magnoliophyta (flowering plants)</phylum>
42 
        <family>Scrophulariaceae</family>
43 
        <fieldNumber>545</fieldNumber>
44 50 
        <recordedBy>J. B. Walker</recordedBy>
45 
        <eventDate>1994-01-17</eventDate>
46 
        <day>17</day>
47 
        <continent>Central America</continent>
48 
        <country>Belize</country>
51 
        <scientificName>Scrophulariaceae</scientificName>
49 52 
        <stateProvince>Belize District</stateProvince>
53 
        <verbatimLatitude>17.40</verbatimLatitude>
50 54 
        <verbatimLocality>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</verbatimLocality>
51 55 
        <verbatimLongitude>-88.50</verbatimLongitude>
52 
        <verbatimLatitude>17.40</verbatimLatitude>
53 
        <minimumElevationInMeters>15</minimumElevationInMeters>
54 
        <maximumElevationInMeters>15</maximumElevationInMeters>
55 
        <occurrenceID>220541</occurrenceID>
56 56 
    </list>
57 57 
</DwC>
inputs/NYBG-CSV/maps/DwC.specimens.full.csv
1 
"NYBG","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionCode=$/_ignore/inLabel]/","Comments"
2 
"key",,
3 
"DateLastModified","dcterms:modified",
4 
"InstitutionCode",,
5 
"CollectionCode","collectionCode",
6 
"CatalogNumber","catalogNumber",
7 
"ScientificName","scientificName",
8 
"BasisOfRecord","basisOfRecord",
9 
"Kingdom","kingdom",
10 
"Phylum","phylum",
11 
"Class","class",
12 
"Order","order",
13 
"Family","family",
14 
"Genus","genus",
15 
"Species","specificEpithet",
16 
"Subspecies","infraspecificEpithet",
17 
"ScientificNameAuthor","scientificNameAuthorship",
18 
"IdentifiedBy","identifiedBy",
19 
"YearIdentified","dateIdentified/_alt/2/_date/year",
20 
"MonthIdentified","dateIdentified/_alt/2/_date/month",
21 
"DayIdentified","dateIdentified/_alt/2/_date/day",
22 
"TypeStatus","typeStatus",
23 
"CollectorNumber","recordNumber",
24 
"FieldNumber","fieldNumber",
25 
"Collector","recordedBy",
26 
"YearCollected","eventDate/_alt/2/_date/year",
27 
"MonthCollected","eventDate/_alt/2/_date/month",
28 
"DayCollected","eventDate/_alt/2/_date/day",
29 
"JulianDay","day",
30 
"TimeOfDay","eventTime",
31 
"ContinentOcean","continent",
32 
"Country","country",
33 
"StateProvince","stateProvince",
34 
"County","county",
35 
"Locality","verbatimLocality",
36 
"Longitude","verbatimLongitude",
37 
"Latitude","verbatimLatitude",
38 
"CoordinatePrecision","coordinatePrecision",
39 
"BoundingBox","footprintWKT",
40 
"MinimumElevation","minimumElevationInMeters",
41 
"MaximumElevation","maximumElevationInMeters",
42 
"MinimumDepth","minimumDepthInMeters",
43 
"MaximumDepth","maximumDepthInMeters",
44 
"Sex","sex",
45 
"PreparationType","preparations",
46 
"IndividualCount","individualCount",
47 
"PreviousCatalogNumber","previousIdentifications","?"
48 
"RelationshipType","relationshipOfResource",
49 
"RelatedCatalogItem","relatedResourceID",
50 
"Notes","fieldNotes/_merge/1",
51 
"Habitat","habitat/_merge/1",
52 
"PlantFungusDescription","fieldNotes/_merge/2/_label[label=""plant fungus""]/value",
53 
"Substrate","bien.substrate",
54 
"Vegetation","habitat/_merge/2",
55 
"UniqueNYInternalRecordNumber","occurrenceID",
1 
NYBG,"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionCode=$/_ignore/inLabel]/",Comments
2 
BasisOfRecord,basisOfRecord,
3 
Substrate,bien.substrate,
4 
CatalogNumber,catalogNumber,
5 
Class,class,
6 
CollectionCode,collectionCode,
7 
ContinentOcean,continent,
8 
CoordinatePrecision,coordinatePrecision,
9 
Country,country,
10 
County,county,
11 
DayIdentified,dateIdentified/_alt/2/_date/day,
12 
MonthIdentified,dateIdentified/_alt/2/_date/month,
13 
YearIdentified,dateIdentified/_alt/2/_date/year,
14 
JulianDay,day,
15 
DateLastModified,dcterms:modified,
16 
DayCollected,eventDate/_alt/2/_date/day,
17 
MonthCollected,eventDate/_alt/2/_date/month,
18 
YearCollected,eventDate/_alt/2/_date/year,
19 
TimeOfDay,eventTime,
20 
Family,family,
21 
Notes,fieldNotes/_merge/1,
22 
PlantFungusDescription,"fieldNotes/_merge/2/_label[label=""plant fungus""]/value",
23 
FieldNumber,fieldNumber,
24 
BoundingBox,footprintWKT,
25 
Genus,genus,
26 
Habitat,habitat/_merge/1,
27 
Vegetation,habitat/_merge/2,
28 
IdentifiedBy,identifiedBy,
29 
IndividualCount,individualCount,
30 
Subspecies,infraspecificEpithet,
31 
Kingdom,kingdom,
32 
MaximumDepth,maximumDepthInMeters,
33 
MaximumElevation,maximumElevationInMeters,
34 
MinimumDepth,minimumDepthInMeters,
35 
MinimumElevation,minimumElevationInMeters,
36 
UniqueNYInternalRecordNumber,occurrenceID,
37 
Order,order,
38 
Phylum,phylum,
39 
PreparationType,preparations,
40 
PreviousCatalogNumber,previousIdentifications,?
41 
CollectorNumber,recordNumber,
42 
Collector,recordedBy,
43 
RelatedCatalogItem,relatedResourceID,
44 
RelationshipType,relationshipOfResource,
45 
ScientificName,scientificName,
46 
ScientificNameAuthor,scientificNameAuthorship,
47 
Sex,sex,
48 
Species,specificEpithet,
49 
StateProvince,stateProvince,
50 
TypeStatus,typeStatus,
51 
Latitude,verbatimLatitude,
52 
Locality,verbatimLocality,
53 
Longitude,verbatimLongitude,
54 
InstitutionCode,,
55 
key,,
mappings/DwC.self.specimens.csv
1 
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionCode=$/_ignore/inLabel]/","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionCode=$/_ignore/inLabel]/"
2 
Country,Country
3 
country,country
4 
StateProvince,StateProvince
5 
stateProvince,stateProvince
6 
County,County
7 
county,county
8 
coordinatePrecision,coordinatePrecision
9 
CoordinatePrecision,CoordinatePrecision
10 
coordinatePrecision/_noCV/value,coordinatePrecision/_noCV/value
11 
BoundingBox,BoundingBox
12 
footprintWKT,footprintWKT
13 
locality,locality
14 
Locality,Locality
15 
verbatimLocality,verbatimLocality
16 
MaximumElevation,MaximumElevation
17 
maximumElevationInMeters,maximumElevationInMeters
18 
MinimumElevation,MinimumElevation
19 
minimumElevationInMeters,minimumElevationInMeters
20 
decimalLatitude,decimalLatitude
21 
Latitude,Latitude
22 
verbatimLatitude,verbatimLatitude
23 
decimalLongitude,decimalLongitude
24 
Longitude,Longitude
25 
verbatimLongitude,verbatimLongitude
26 
habitat,habitat
27 
habitat/_merge/1,habitat/_merge/1
28 
habitat/_merge/2,habitat/_merge/2
29 
bien.substrate,bien.substrate
30 
eventDate,eventDate
31 
DayCollected,DayCollected
32 
eventDate/_alt/2/_date/day,eventDate/_alt/2/_date/day
33 
MonthCollected,MonthCollected
34 
eventDate/_alt/2/_date/month,eventDate/_alt/2/_date/month
35 
YearCollected,YearCollected
36 
eventDate/_alt/2/_date/year,eventDate/_alt/2/_date/year
37 
MaximumDepth,MaximumDepth
38 
maximumDepthInMeters,maximumDepthInMeters
39 
MinimumDepth,MinimumDepth
40 
minimumDepthInMeters,minimumDepthInMeters
41 
ScientificNameAuthor,ScientificNameAuthor
42 
scientificNameAuthorship,scientificNameAuthorship
43 
Sex,Sex
44 
sex,sex
45 
dateIdentified,dateIdentified
46 
DayIdentified,DayIdentified
47 
dateIdentified/_alt/2/_date/day,dateIdentified/_alt/2/_date/day
48 
MonthIdentified,MonthIdentified
49 
dateIdentified/_alt/2/_date/month,dateIdentified/_alt/2/_date/month
50 
YearIdentified,YearIdentified
51 
dateIdentified/_alt/2/_date/year,dateIdentified/_alt/2/_date/year
52 
IdentifiedBy,IdentifiedBy
53 
identifiedBy,identifiedBy
54 
ScientificName,ScientificName
55 
scientificName,scientificName
56 
Class,Class
57 
class,class
58 
Family,Family
59 
family,family
60 
Genus,Genus
61 
genus,genus
62 
Kingdom,Kingdom
63 
kingdom,kingdom
64 
Order,Order
65 
order,order
66 
Species,Species
67 
specificEpithet,specificEpithet
68 
Phylum,Phylum
69 
phylum,phylum
70 
Subspecies,Subspecies
71 
infraspecificEpithet,infraspecificEpithet
72 
Collector,Collector
73 
recordedBy,recordedBy
74 
CollectionCode,CollectionCode
75 
collectionCode,collectionCode
76 
fieldNotes,fieldNotes
77 
Notes,Notes
78 
fieldNotes/_merge/1,fieldNotes/_merge/1
79 
"fieldNotes/_merge/2/_label[label=""plant fungus""]/value","fieldNotes/_merge/2/_label[label=""plant fungus""]/value"
80 
CatalogNumber,CatalogNumber
81 
catalogNumber,catalogNumber
82 
CollectorNumber,CollectorNumber
83 
recordNumber,recordNumber
84 
collectionID,collectionID
85 
FieldNumber,FieldNumber
86 
fieldNumber,fieldNumber
87 
InstitutionCode,InstitutionCode
88 
institutionCode,institutionCode
89 
occurrenceID,occurrenceID
90 
BasisOfRecord,BasisOfRecord
91 
ContinentOcean,ContinentOcean
92 
DateLastModified,DateLastModified
93 
IndividualCount,IndividualCount
94 
JulianDay,JulianDay
95 
PreparationType,PreparationType
96 
PreviousCatalogNumber,PreviousCatalogNumber
97 
RelatedCatalogItem,RelatedCatalogItem
98 
RelationshipType,RelationshipType
99 
TimeOfDay,TimeOfDay
100 
TypeStatus,TypeStatus
101 
acceptedNameUsage,acceptedNameUsage
102 
acceptedNameUsageID,acceptedNameUsageID
103 
associatedMedia,associatedMedia
104 
associatedOccurrences,associatedOccurrences
105 
associatedReferences,associatedReferences
106 
associatedSequences,associatedSequences
107 
associatedTaxa,associatedTaxa
108 
basisOfRecord,basisOfRecord
109 
bed,bed
110 
behavior,behavior
111 
continent,continent
112 
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters
113 
countryCode,countryCode
114 
dataGeneralizations,dataGeneralizations
115 
datasetID,datasetID
116 
datasetName,datasetName
117 
day,day
118 
dcterms:accessRights,dcterms:accessRights
119 
dcterms:bibliographicCitation,dcterms:bibliographicCitation
120 
dcterms:language,dcterms:language
121 
dcterms:modified,dcterms:modified
122 
dcterms:references,dcterms:references
123 
dcterms:rights,dcterms:rights
124 
dcterms:rightsHolder,dcterms:rightsHolder
125 
dcterms:type,dcterms:type
126 
disposition,disposition
127 
dynamicProperties,dynamicProperties
128 
earliestAgeOrLowestStage,earliestAgeOrLowestStage
129 
earliestEonOrLowestEonothem,earliestEonOrLowestEonothem
130 
earliestEpochOrLowestSeries,earliestEpochOrLowestSeries
131 
earliestEraOrLowestErathem,earliestEraOrLowestErathem
132 
earliestPeriodOrLowestSystem,earliestPeriodOrLowestSystem
133 
endDayOfYear,endDayOfYear
134 
establishmentMeans,establishmentMeans
135 
eventID,eventID
136 
eventRemarks,eventRemarks
137 
eventTime,eventTime
138 
footprintSRS,footprintSRS
139 
footprintSpatialFit,footprintSpatialFit
140 
formation,formation
141 
geodeticDatum,geodeticDatum
142 
geologicalContextID,geologicalContextID
143 
georeferenceProtocol,georeferenceProtocol
144 
georeferenceRemarks,georeferenceRemarks
145 
georeferenceSources,georeferenceSources
146 
georeferenceVerificationStatus,georeferenceVerificationStatus
147 
georeferencedBy,georeferencedBy
148 
georeferencedDate,georeferencedDate
149 
group,group
150 
higherClassification,higherClassification
151 
higherGeography,higherGeography
152 
higherGeographyID,higherGeographyID
153 
highestBiostratigraphicZone,highestBiostratigraphicZone
154 
identificationID,identificationID
155 
identificationQualifier,identificationQualifier
156 
identificationReferences,identificationReferences
157 
identificationRemarks,identificationRemarks
158 
identificationVerificationStatus,identificationVerificationStatus
159 
individualCount,individualCount
160 
individualID,individualID
161 
informationWithheld,informationWithheld
162 
institutionID,institutionID
163 
island,island
164 
islandGroup,islandGroup
165 
latestAgeOrHighestStage,latestAgeOrHighestStage
166 
latestEonOrHighestEonothem,latestEonOrHighestEonothem
167 
latestEpochOrHighestSeries,latestEpochOrHighestSeries
168 
latestEraOrHighestErathem,latestEraOrHighestErathem
169 
latestPeriodOrHighestSystem,latestPeriodOrHighestSystem
170 
lifeStage,lifeStage
171 
lithostratigraphicTerms,lithostratigraphicTerms
172 
locationAccordingTo,locationAccordingTo
173 
locationID,locationID
174 
locationRemarks,locationRemarks
175 
lowestBiostratigraphicZone,lowestBiostratigraphicZone
176 
maximumDistanceAboveSurfaceInMeters,maximumDistanceAboveSurfaceInMeters
177 
measurementAccuracy,measurementAccuracy
178 
measurementDeterminedBy,measurementDeterminedBy
179 
measurementDeterminedDate,measurementDeterminedDate
180 
measurementID,measurementID
181 
measurementMethod,measurementMethod
182 
measurementRemarks,measurementRemarks
183 
measurementType,measurementType
184 
measurementUnit,measurementUnit
185 
measurementValue,measurementValue
186 
member,member
187 
minimumDistanceAboveSurfaceInMeters,minimumDistanceAboveSurfaceInMeters
188 
month,month
189 
municipality,municipality
190 
nameAccordingTo,nameAccordingTo
191 
nameAccordingToID,nameAccordingToID
192 
namePublishedIn,namePublishedIn
193 
namePublishedInID,namePublishedInID
194 
namePublishedInYear,namePublishedInYear
195 
nomenclaturalCode,nomenclaturalCode
196 
nomenclaturalStatus,nomenclaturalStatus
197 
occurrenceRemarks,occurrenceRemarks
198 
occurrenceStatus,occurrenceStatus
199 
originalNameUsage,originalNameUsage
200 
originalNameUsageID,originalNameUsageID
201 
otherCatalogNumbers,otherCatalogNumbers
202 
ownerInstitutionCode,ownerInstitutionCode
203 
parentNameUsage,parentNameUsage
204 
parentNameUsageID,parentNameUsageID
205 
pointRadiusSpatialFit,pointRadiusSpatialFit
206 
preparations,preparations
207 
previousIdentifications,previousIdentifications
208 
relatedResourceID,relatedResourceID
209 
relationshipAccordingTo,relationshipAccordingTo
210 
relationshipEstablishedDate,relationshipEstablishedDate
211 
relationshipOfResource,relationshipOfResource
212 
relationshipRemarks,relationshipRemarks
213 
reproductiveCondition,reproductiveCondition
214 
resourceID,resourceID
215 
resourceRelationshipID,resourceRelationshipID
216 
samplingEffort,samplingEffort
217 
samplingProtocol,samplingProtocol
218 
scientificNameID,scientificNameID
219 
startDayOfYear,startDayOfYear
220 
subgenus,subgenus
221 
taxonConceptID,taxonConceptID
222 
taxonID,taxonID
223 
taxonRank,taxonRank
224 
taxonRemarks,taxonRemarks
225 
taxonomicStatus,taxonomicStatus
226 
typeStatus,typeStatus
227 
verbatimCoordinateSystem,verbatimCoordinateSystem
228 
verbatimCoordinates,verbatimCoordinates
229 
verbatimDepth,verbatimDepth
230 
verbatimElevation,verbatimElevation
231 
verbatimEventDate,verbatimEventDate
232 
verbatimSRS,verbatimSRS
233 
verbatimTaxonRank,verbatimTaxonRank
234 
vernacularName,vernacularName
235 
waterBody,waterBody
236 
year,year
mappings/Makefile
38 38 
	$(MAKE) $(@:%=.%.last_cleanup)
39 39 
endif
40 40 

  		




  41
  
  
    
##### Maps generated with join/union


  		




  
  41
  
    
##### Maps generated with join


  		




  42
  42
  
    

  		




  43
  43
  
    
joinMaps :=


  		




  44
  44
  
    

  		




  ......




  46
  46
  
    
	env header_num=1 $(bin)/join_union_sort <$+ >$@


  		




  47
  47
  
    
joinMaps += DwC-VegBIEN.specimens.csv


  		




  48
  48
  
    

  		




  
  49
  
    
DwC.self.specimens.csv: DwC-VegBIEN.specimens.csv


  		




  
  50
  
    
	$(bin)/cols 0 0 <$< >$@


  		




  
  51
  
    
joinMaps += DwC.self.specimens.csv


  		




  
  52
  
    

  		




  49
  53
  
    
join_maps: $(joinMaps) ;


  		




  50
  54
  
    

  		




  51
  55
  
    
all += $(joinMaps)


  		












Also available in:  Unified diff