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Name Size Revision Age Author Comment
  BIEN2 10896 about 11 years Aaron Marcuse-Kubitza added BIEN2/traits_observation_counts.xls
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  backups 11355 about 11 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated
  bin 11456 about 11 years Aaron Marcuse-Kubitza bugfix: bin/with_all: @inputs default value: us...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  derived 11450 about 11 years Paul Sarando Added db user and host to load-geoscrub-input.s...
  exports 11457 about 11 years Aaron Marcuse-Kubitza exports/2013-10-18.Brian_Enquist.Canadensys.csv...
  inputs 11440 about 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: added %/import_temp alia...
  lib 11436 about 11 years Aaron Marcuse-Kubitza added lib/runscripts/import_subset.run, extract...
  mappings 11107 about 11 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: nest all ...
  planning 11458 about 11 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: updated fo...
  schemas 11452 about 11 years Aaron Marcuse-Kubitza bugfix: schemas/pg_hba.Mac.conf: made same chan...
  web 11403 about 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.7 KB 11150 about 11 years Aaron Marcuse-Kubitza /Makefile: mk_db: config/users.sql: unset ON_ER...
README.TXT 24.2 KB 11263 about 11 years Aaron Marcuse-Kubitza /README.TXT: Single datasource import: added po...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 661 Bytes 10881 about 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): updated runtime (2...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
11458 10/29/2013 06:19 AM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: updated for progress
11457 10/29/2013 04:16 AM Aaron Marcuse-Kubitza

exports/2013-10-18.Brian_Enquist.Canadensys.csv.run: documented runtime (35 min, now that bugs have been fixed)
11456 10/29/2013 03:33 AM Aaron Marcuse-Kubitza

bugfix: bin/with_all: @inputs default value: use `local`, so that the default value is only set for the current function and doesn't leak back out into the caller. this fixes a bug in subset imports where import_all's Source/import call to with_all would add the .* datasources, but these would then stay in for the import_scrub call, causing extra .* datasources to incorrectly be imported.
11455 10/29/2013 02:22 AM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: usability testing: added additional subtask to validate the scientists' extracts (i.e. check that the extract fulfills their request)
11454 10/29/2013 02:17 AM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: provide scientists with their requested data: added separate subtask for Brian Enquist's Canadensys extract
11453 10/29/2013 02:12 AM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: updated for progress and revised schedule
11452 10/29/2013 01:53 AM Aaron Marcuse-Kubitza

bugfix: schemas/pg_hba.Mac.conf: made same change for Mac as was made for Linux in r11451
11451 10/29/2013 01:22 AM Aaron Marcuse-Kubitza

bugfix: schemas/pg_hba.conf: don't allow ident authentication for Unix socket connections, because this apparently prevents having normal, password-based connections ("md5"). note that just switching the order of the ident and md5 entries is not useful, because whichever authentication type comes second will be ignored completely. this problem was previously worked around by just not using Unix socket connections at all, and always specifying "localhost" as the host to force a hostname-based connection. this does not affect the postgres superuser, because they have their own ident line in pg_hba.conf.
11450 10/25/2013 06:15 PM Paul Sarando

Added db user and host to load-geoscrub-input.sh

The psql commands in load-geoscrub-input.sh will now connect with a
specific user on a specific host.
Updated the 'COPY' sql statement to a '\COPY' statement, so that the
psql user does not have to be a PostgreSQL superuser.
11449 10/25/2013 04:51 PM Aaron Marcuse-Kubitza

derived/biengeo/README.txt: geoscrub new data: steps that use .sql scripts: added the psql commands to run these

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