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Name Size Revision Age Author Comment
  BIEN2 10896 about 11 years Aaron Marcuse-Kubitza added BIEN2/traits_observation_counts.xls
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  backups 11355 about 11 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated
  bin 11456 about 11 years Aaron Marcuse-Kubitza bugfix: bin/with_all: @inputs default value: us...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  derived 11497 about 11 years Paul Sarando Updated biengeo README with new script workflow.
  exports 11485 about 11 years Aaron Marcuse-Kubitza added exports/2013-7-10.Naia.range_limiting_fac...
  inputs 11524 about 11 years Aaron Marcuse-Kubitza inputs/VegBank/taxonobservation_/map.csv, postp...
  lib 11462 about 11 years Aaron Marcuse-Kubitza lib/runscripts/import_subset.run: $version: use...
  mappings 11513 about 11 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: mapped taxon_dete...
  planning 11508 about 11 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: geoscrubbi...
  schemas 11505 about 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxondetermination_set_isc...
  web 11403 about 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.7 KB 11150 about 11 years Aaron Marcuse-Kubitza /Makefile: mk_db: config/users.sql: unset ON_ER...
README.TXT 25 KB 11516 about 11 years Aaron Marcuse-Kubitza /README.TXT: for each task, documented which ma...
fix_perms 97 Bytes 7560 over 11 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 661 Bytes 10881 about 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): updated runtime (2...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
11524 10/31/2013 02:46 AM Aaron Marcuse-Kubitza

inputs/VegBank/taxonobservation_/map.csv, postprocess.sql: mapped identifiedBy (the join_words() of identifiedBy_first, etc.)

11523 10/31/2013 02:34 AM Aaron Marcuse-Kubitza

inputs/VegBank/taxonobservation_/create.sql: also join party_id to get the identifiedBy (not mapped yet). note that the inserted row count changes, because taxonobservation_ does not yet have a pkey to do a stable ordering with.

11522 10/31/2013 02:16 AM Aaron Marcuse-Kubitza

bugfix: inputs/input.Makefile: %/install: don't run map_table, because this instead done by the runscript. although it does not hurt to do it twice, invoking load_data by itself should not run map_table at all, so that the original column names can be inspected in the table and map.csv reordered to match.

11521 10/31/2013 02:06 AM Aaron Marcuse-Kubitza

inputs/VegBank/vegbank.~.clean_up.sql: taxoninterpretation.party_id: don't rename to taxoninterpretation_party_id, so that this can be used directly in taxonobservation_/create.sql with a USING join

11520 10/31/2013 01:52 AM Aaron Marcuse-Kubitza

inputs/VegBank/taxonobservation_/create.sql: join taxonobservation to taxoninterpretation (as in CVS) instead of vice versa, since taxonobservation is the primary, operative table. having VegBank and CVS do things the same way helps ensure that fixes in one can transfer easily to the other.

11519 10/31/2013 01:51 AM Aaron Marcuse-Kubitza

bugfix: inputs/input.Makefile: %/install: don't run map_table, because this instead done by the runscript. although it does not hurt to do it twice, invoking load_data by itself should not run map_table at all, so that the original column names can be inspected in the table and map.csv reordered to match.

11518 10/31/2013 01:30 AM Aaron Marcuse-Kubitza

inputs/VegBank/^taxon_observation.**.sample/create.sql: synced with taxon_observation.**

11517 10/31/2013 01:22 AM Aaron Marcuse-Kubitza

(for r11396) fix: bin/map: put template: comment out the "Put template:" label so that the output is valid XML, and displays properly in a browser rather than showing a syntax error

11516 10/31/2013 12:50 AM Aaron Marcuse-Kubitza

/README.TXT: for each task, documented which machine it's run on. for tasks run on vegbiendev, added pointer to "Connecting to vegbiendev" steps.

11515 10/31/2013 12:19 AM Aaron Marcuse-Kubitza

/README.TXT: added instructions for connecting to vegbiendev

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