Project

General

Profile

« Previous | Next » 

Revision 11958

mappings/VegCore.htm: regenerated from wiki. merged confusingly-named TaxonObservation into TaxonOccurrence. added project_participant.

View differences:

mappings/VegCore.htm
6 6
<meta name="description" content="Redmine" />
7 7
<meta name="keywords" content="issue,bug,tracker" />
8 8
<meta content="authenticity_token" name="csrf-param" />
9
<meta content="ciNzO8lxj/O5m3NyCihHkEJu17VioR1Ove6ji+mOC7A=" name="csrf-token" />
9
<meta content="Bq+tsN8KDkEbS+2tdR9MAcJDvj6HdR6M+2aWArRxCQI=" name="csrf-token" />
10 10
<link rel='shortcut icon' href='/nceas/favicon.ico?1347421715' />
11 11
<link href="/nceas/stylesheets/jquery/jquery-ui-1.9.2.css?1364512407" media="all" rel="stylesheet" type="text/css" />
12 12
<link href="/nceas/stylesheets/application.css?1364512407" media="all" rel="stylesheet" type="text/css" />
......
45 45
</form>        
46 46
    </div>
47 47

  
48
    <h1><a href="/nceas/projects/working-groups?jump=wiki" class="root">Working Groups</a> » BIEN</h1>
48
    <!--<h1><a href="/nceas/projects/working-groups?jump=wiki" class="root">Working Groups</a> » BIEN</h1>-->
49
    <img src="/nceas/images/nceas_logo.png" style="top-margin: 15px; left-margin: 15px;"/>
49 50

  
50 51
    <div id="main-menu">
51 52
        <ul><li><a href="/nceas/projects/bien" class="overview">Overview</a></li>
......
152 153
	<p id="fn2" class="footnote"><sup>2</sup> at the cost of slightly slower index scans when there is a large number of subclasses and rows are evenly distributed between them (because each subclass index needs to be scanned separately).<br />also, when inserting into a subclass, you need to explicitly check that the pkey doesn't exist in any superclass (or sibling subclass), because unique indexes don't include superclass rows.</p>
153 154

  
154 155

  
155
	<p id="fn3" class="footnote"><sup>3</sup> "A serious limitation of the inheritance feature is that indexes (including unique constraints) and foreign key constraints only apply to single tables, not to their inheritance children. This is true on both the referencing and referenced sides of a foreign key constraint." (<a href="http://www.postgresql.org/docs/9.3/static/ddl-inherit.html#DDL-INHERIT-CAVEATS" class="external">PostgreSQL: Inheritance > Caveats</a>)</p>
156
	<p id="fn3" class="footnote"><sup>3</sup> "A serious limitation of the inheritance feature is that indexes (including unique constraints) and foreign key constraints only apply to single tables, not to their inheritance children. This is true on both the referencing and referenced sides of a foreign key constraint." (<a href="http://www.postgresql.org/docs/9.3/static/ddl-inherit.html#DDL-INHERIT-CAVEATS" class="external">PostgreSQL: Inheritance > Caveats</a>)<br />however, you can simulate a foreign key using a domain type with a CHECK constraint that SELECTs on the referenced table. this SELECT statement will also query subclass tables, making this a suitable way of implementing foreign keys to superclass tables.</p>
156 157

  
157 158

  
158 159
	<p><a href="http://VegCore.vegpath.org/ERD/"><img src="http://vegpath.org/VegCore/ERD/VegCore.ERD.png" title="VegCore schema: click for hyperlinked version" alt="VegCore schema: click for hyperlinked version" /></a></p>
......
903 904
<h2  style="padding-left:2em;"><a href="#event__participant" class="wiki-page">event__participant</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&#38;wparam=observationContributor&#38;entity=dba_tabledescription&#38;where=where_tablename#PARTY_ID"><img src="_" style="font-size: small;" title="VegBank" alt="VegBank" /></a><a href="#event__participant" class="wiki-anchor">&para;</a></h2>
904 905

  
905 906

  
907
	<a name="project_participant"></a>
908
<h2  style="padding-left:2em;"><a href="#project_participant" class="wiki-page">project_participant</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&#38;wparam=projectContributor&#38;entity=dba_tabledescription&#38;where=where_tablename#PARTY_ID"><img src="_" style="font-size: small;" title="VegBank" alt="VegBank" /></a><a href="#project_participant" class="wiki-anchor">&para;</a></h2>
909

  
910

  
906 911
	<a name="Coordinates"></a>
907 912
<h1 ><a href="#Coordinates" class="wiki-page">Coordinates</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/entry/inputs/CTFS/_archive/DBv5.txt#Coordinates"><img src="_" style="font-size: small;" title="CTFS" alt="CTFS" /></a><a href="#Coordinates" class="wiki-anchor">&para;</a></h1>
908 913

  
......
2800 2805
<h3  style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#TaxonNameUsageConcept" class="wiki-page">TaxonNameUsageConcept</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/taxonNameUsageConcepts/taxonNameUsageConcept"><img src="_" style="font-size: small;" title="VegX" alt="VegX" /></a><a href="#TaxonNameUsageConcept" class="wiki-anchor">&para;</a></h3>
2801 2806

  
2802 2807

  
2808
	<a name="SpeciesInventory"></a>
2809
<h3  style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#SpeciesInventory" class="wiki-page">SpeciesInventory</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/CTFS#SpeciesInventory"><img src="_" style="font-size: small;" title="CTFS" alt="CTFS" /></a><a href="#SpeciesInventory" class="wiki-anchor">&para;</a></h3>
2810

  
2811

  
2803 2812
	<p style="padding-left:3em;">Named like: <a href="#Occurrence" class="wiki-page">Occurrence</a></p>
2804 2813

  
2805 2814

  
......
2829 2838
<h3  style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#taxonNameUsageConceptID" class="wiki-page">taxonNameUsageConceptID</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganisms/individualOrganism/taxonNameUsageConceptID"><img src="_" style="font-size: small;" title="VegX" alt="VegX" /></a><a href="#taxonNameUsageConceptID" class="wiki-anchor">&para;</a></h3>
2830 2839

  
2831 2840

  
2841
	<a name="taxonObservationID"></a>
2842
<h3  style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#taxonObservationID" class="wiki-page">taxonObservationID</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&#38;wparam=taxonobservation&#38;entity=dba_tabledescription&#38;where=where_tablename#TAXONOBSERVATION_ID"><img src="_" style="font-size: small;" title="VegBank" alt="VegBank" /></a><a href="#taxonObservationID" class="wiki-anchor">&para;</a></h3>
2843

  
2844

  
2845
	<a name="speciesInvID"></a>
2846
<h3  style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#speciesInvID" class="wiki-page">speciesInvID</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/CTFS#SpeciesInvID"><img src="_" style="font-size: small;" title="CTFS" alt="CTFS" /></a><a href="#speciesInvID" class="wiki-anchor">&para;</a></h3>
2847

  
2848

  
2832 2849
	<p style="padding-left:5em;">Related: <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&#38;wparam=taxonobservation&#38;entity=dba_tabledescription&#38;where=where_tablename" class="external">VegBank:taxonObservation</a></p>
2833 2850

  
2834 2851

  
......
2855 2872
<h2  style="padding-left:2em;"><a href="#dayCollected" class="wiki-page">dayCollected</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/DayCollected"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#dayCollected" class="wiki-anchor">&para;</a></h2>
2856 2873

  
2857 2874

  
2875
	<a name="occurrenceStatus"></a>
2876
<h2  style="padding-left:2em;"><a href="#occurrenceStatus" class="wiki-page">occurrenceStatus</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#occurrenceStatus"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#occurrenceStatus" class="wiki-anchor">&para;</a></h2>
2877

  
2878

  
2858 2879
	<a name="growthForm"></a>
2859 2880
<h2  style="padding-left:2em;"><a href="#growthForm" class="wiki-page">growthForm</a><a href="#growthForm" class="wiki-anchor">&para;</a></h2>
2860 2881

  
......
3071 3092

  
3072 3093

  
3073 3094
	<a name="TaxonObservation"></a>
3074
<h1 ><a href="#TaxonObservation" class="wiki-page">TaxonObservation</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&#38;wparam=taxonobservation&#38;entity=dba_tabledescription&#38;where=where_tablename"><img src="_" style="font-size: small;" title="VegBank" alt="VegBank" /></a><a href="#TaxonObservation" class="wiki-anchor">&para;</a></h1>
3095
<h1 ><del><a href="#TaxonObservation" class="wiki-page">TaxonObservation</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&#38;wparam=taxonobservation&#38;entity=dba_tabledescription&#38;where=where_tablename"><img src="_" style="font-size: small;" title="VegBank" alt="VegBank" /></a></del> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="DEPRECATED" alt="DEPRECATED" /><a href="#TaxonObservation" class="wiki-anchor">&para;</a></h1>
3075 3096

  
3076 3097

  
3077
	<p style="padding-left:3em;">An observation of just a <a href="#Taxon" class="wiki-page">Taxon</a>'s <em>presence</em></p>
3098
	<p style="padding-left:3em;">denormalized VegCore doesn't distinguish between taxon occurrences and taxon observations of them.<br />use <a href="#TaxonOccurrence" class="wiki-page">TaxonOccurrence</a> instead.</p>
3078 3099

  
3079 3100

  
3080
	<a name="SpeciesInventory"></a>
3081
<h3  style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#SpeciesInventory" class="wiki-page">SpeciesInventory</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/CTFS#SpeciesInventory"><img src="_" style="font-size: small;" title="CTFS" alt="CTFS" /></a><a href="#SpeciesInventory" class="wiki-anchor">&para;</a></h3>
3082

  
3083

  
3084
	<a name="taxonObservationID"></a>
3085
<h2  style="padding-left:2em;"><a href="#taxonObservationID" class="wiki-page">taxonObservationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&#38;wparam=taxonobservation&#38;entity=dba_tabledescription&#38;where=where_tablename#TAXONOBSERVATION_ID"><img src="_" style="font-size: small;" title="VegBank" alt="VegBank" /></a><a href="#taxonObservationID" class="wiki-anchor">&para;</a></h2>
3086

  
3087

  
3088
	<a name="speciesInvID"></a>
3089
<h3  style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#speciesInvID" class="wiki-page">speciesInvID</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/CTFS#SpeciesInvID"><img src="_" style="font-size: small;" title="CTFS" alt="CTFS" /></a><a href="#speciesInvID" class="wiki-anchor">&para;</a></h3>
3090

  
3091

  
3092
	<a name="occurrenceStatus"></a>
3093
<h2  style="padding-left:2em;"><a href="#occurrenceStatus" class="wiki-page">occurrenceStatus</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#occurrenceStatus"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#occurrenceStatus" class="wiki-anchor">&para;</a></h2>
3094

  
3095

  
3096 3101
	<a name="AggregateObservation"></a>
3097 3102
<h1 ><a href="#AggregateObservation" class="wiki-page">AggregateObservation</a><a href="#AggregateObservation" class="wiki-anchor">&para;</a></h1>
3098 3103

  
......
4274 4279
</li>
4275 4280
</ul>
4276 4281
</li>
4282
<li><a href="/nceas/projects/bien/wiki/Normalized_VegCore_to-dos">Normalized VegCore to-dos</a></li>
4277 4283
<li><a href="/nceas/projects/bien/wiki/SQL_dotpaths">SQL dotpaths</a></li>
4278 4284
<li><a href="/nceas/projects/bien/wiki/VegCore_refactoring">VegCore refactoring</a></li>
4279 4285
</ul>
mappings/VegCore.tables.redmine
25 25
[[VegCore#TaxonOccurrence|TaxonOccurrence]]
26 26
[[VegCore#TaxonDetermination|TaxonDetermination]]
27 27
[[VegCore#OriginalTaxonDetermination|OriginalTaxonDetermination]]
28
[[VegCore#TaxonObservation|TaxonObservation]]
29 28
[[VegCore#AggregateObservation|AggregateObservation]]
30 29
[[VegCore#Individual|Individual]]
31 30
[[VegCore#IndividualObservation|IndividualObservation]]
mappings/VegCore.tables.csv
25 25
TaxonOccurrence
26 26
TaxonDetermination
27 27
OriginalTaxonDetermination
28
TaxonObservation
29 28
AggregateObservation
30 29
Individual
31 30
IndividualObservation
mappings/VegCore.thesaurus.csv
203 203
shapeOfSite,footprintWKT
204 204
soilConductivity,conductivity
205 205
soilTexture,texture
206
speciesInvID,taxonObservationID
206
speciesInvID,taxonOccurrenceID
207 207
speciesName,specificEpithet
208 208
species_DwC,specificEpithet
209 209
species_VegBank,speciesBinomial
......
225 225
taxonIsAccepted,taxonIsCanonical
226 226
taxonMorphospecies,speciesBinomialWithMorphospecies
227 227
taxonNameUsageConceptID,taxonOccurrenceID
228
taxonObservationID,taxonOccurrenceID
228 229
temp_C,temperature_C
229 230
timeOfDay,eventTime
230 231
traitName,measurementName
mappings/VegCore.vocab.csv
502 502
projectName
503 503
projectStartDate
504 504
projectTitle
505
project_participant
505 506
proximateDataProvider
506 507
pubDate
507 508
quadratID

Also available in: Unified diff