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Name Size Revision Age Author Comment
  AggregateObservation 11396 about 11 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  Country.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  ERD 8824 over 11 years Aaron Marcuse-Kubitza added inputs/CTFS/ERD/ VegPath location
  Family.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  Genus.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  InfraspecificEpithet.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  Organism.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  Plot 11865 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/CTFS/import_order.txt: added *.s...
  Plot.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  PlotObservation 11396 about 11 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  Source 11396 about 11 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  SpecificEpithet.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  Stem.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  StemObservation 11865 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/CTFS/import_order.txt: added *.s...
  StemObservation.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  Subplot 11396 about 11 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  SubplotObservation 11396 about 11 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  TaxonOccurrence 11877 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/CTFS/TaxonOccurrence*/map.csv: t...
  TaxonOccurrence.src 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
  _archive 11705 about 11 years Aaron Marcuse-Kubitza copyright scrub: inputs/: removed data provider...
  _src 11705 about 11 years Aaron Marcuse-Kubitza copyright scrub: inputs/: removed data provider...
  logs 8801 over 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: SVN: add, %/add: */logs:...
  schema 8507 over 11 years Aaron Marcuse-Kubitza web/**/.htaccess: RewriteRules: ensured flags a...
  tables 8507 over 11 years Aaron Marcuse-Kubitza web/**/.htaccess: RewriteRules: ensured flags a...
  terms 8507 over 11 years Aaron Marcuse-Kubitza web/**/.htaccess: RewriteRules: ensured flags a...
  verify 6805 almost 12 years Aaron Marcuse-Kubitza input.Makefile: SVN: add: verify: Also ignore *...
.htaccess 323 Bytes 8507 over 11 years Aaron Marcuse-Kubitza web/**/.htaccess: RewriteRules: ensured flags a...
Makefile 27 Bytes 10177 over 11 years Aaron Marcuse-Kubitza inputs/*/: added top-level Makefile which inclu...
import_order.txt 257 Bytes 11865 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/CTFS/import_order.txt: added *.s...
new_terms.csv 1.09 KB 11788 almost 11 years Aaron Marcuse-Kubitza **/new_terms.csv, unmapped_terms.csv updated (u...
run 87 Bytes 10419 over 11 years Aaron Marcuse-Kubitza inputs/CTFS/: switched to new-style import, usi...
table.run 81 Bytes 10179 over 11 years Aaron Marcuse-Kubitza inputs/*/: added table.run for use by the table...
unmapped_terms.csv 819 Bytes 11788 almost 11 years Aaron Marcuse-Kubitza **/new_terms.csv, unmapped_terms.csv updated (u...
  • svn:ignore: *

Latest revisions

# Date Author Comment
11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).

11903 12/11/2013 10:40 PM Aaron Marcuse-Kubitza

bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_import because these tables are left-joined and should not be imported separately

11879 12/09/2013 06:59 PM Aaron Marcuse-Kubitza

inputs/CTFS/*.src/: added test.xml.ref

11878 12/09/2013 06:58 PM Aaron Marcuse-Kubitza

inputs/CTFS/*.src/: added VegBIEN.csv

11877 12/09/2013 06:56 PM Aaron Marcuse-Kubitza

bugfix: inputs/CTFS/TaxonOccurrence*/map.csv: things mapped to taxonObservationID: remapped to taxonOccurrenceID since taxonObservationID is not mapped to anything in VegBIEN (denormalized VegCore doesn't distinguish between taxon occurrences and taxon observations of them)

11865 12/06/2013 07:46 AM Aaron Marcuse-Kubitza

bugfix: inputs/CTFS/import_order.txt: added *.src so that these would be installed under new-style import as well. this means that their columns will now be automapped, requiring the names to be renamed to VegCore names in */create.sql. note that VegCore taxonOccurrenceID has been renamed to taxonObservationID since this was last run.

11788 11/26/2013 11:11 PM Aaron Marcuse-Kubitza

**/new_terms.csv, unmapped_terms.csv updated (using `make missing_mappings`)

11705 11/21/2013 12:24 AM Aaron Marcuse-Kubitza

copyright scrub: inputs/: removed data provider-owned schema and documentation files, which are not BIEN copyright and should not be part of what is submitted for open-sourcing. these files will remain accessible via the web interface (fs.vegpath.org), but will not be in the repository.

11552 10/31/2013 11:12 AM Aaron Marcuse-Kubitza

inputs/CTFS/StemObservation/test.xml.ref: updated inserted row count

11396 10/21/2013 07:14 PM Aaron Marcuse-Kubitza

fix: bin/map: put template: comment out the "Put template:" label so that the output is valid XML, and displays properly in a browser rather than showing a syntax error

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