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Name Size Revision Age Author Comment
  logs 8801 about 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: SVN: add, %/add: */logs:...
.map.csv.last_cleanup 0 Bytes 6346 over 11 years Aaron Marcuse-Kubitza Added inputs/WIN/
VegBIEN.csv 42 Bytes 10260 almost 11 years Aaron Marcuse-Kubitza inputs/*/ which do not contain any explicit col...
header.csv 708 Bytes 10260 almost 11 years Aaron Marcuse-Kubitza inputs/*/ which do not contain any explicit col...
map.csv 1.52 KB 10425 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/*/*/map.csv for specimen tables:...
run 63 Bytes 10260 almost 11 years Aaron Marcuse-Kubitza inputs/*/ which do not contain any explicit col...
test.xml.ref 21.4 KB 11396 over 10 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
unmapped_terms.csv 223 Bytes 10852 almost 11 years Aaron Marcuse-Kubitza inputs/WIN/Specimen/unmapped_terms.csv: updated
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Latest revisions

# Date Author Comment
11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).

11396 10/21/2013 07:14 PM Aaron Marcuse-Kubitza

fix: bin/map: put template: comment out the "Put template:" label so that the output is valid XML, and displays properly in a browser rather than showing a syntax error

11107 09/29/2013 08:58 PM Aaron Marcuse-Kubitza

bugfix: mappings/VegCore-VegBIEN.csv: nest all taxonoccurrences inside a stratum event, so that the parent locationevent is always fully populated before child locationevents point to it. (previously, a stub parent event was created when the child event was imported first, which blocked the fully-populated parent event from being inserted later on.) this uses auto-folding (for VegBank/CVS) and auto-forwarding (for other datasources) to prune empty stratum events for taxonoccurrences that don't have strata. (see wiki.vegpath.org/Auto-folding, wiki.vegpath.org/Auto-forwarding for more info about these normalization techniques.) note that the inserted row counts stay exactly the same for all datasources except VegBank (which was being fixed), indicating that this signficant change to the mappings did not change the semantics of the import of taxonoccurrences.

10866 09/04/2013 11:06 PM Aaron Marcuse-Kubitza

inputs/*/*/test.xml.ref: updated source.shortname for new datasource name, which now starts out with .new suffix

10852 09/04/2013 09:42 AM Aaron Marcuse-Kubitza

inputs/WIN/Specimen/unmapped_terms.csv: updated

10565 08/01/2013 02:56 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: mapped municipality

10425 07/25/2013 07:34 PM Aaron Marcuse-Kubitza

bugfix: inputs/*/*/map.csv for specimen tables: remapped eventDate,day,month,year to *Collected, because a general date always applies to the observation itself rather than to any parent event (specimens don't have a parent event)

10260 07/11/2013 12:53 PM Aaron Marcuse-Kubitza

inputs/*/ which do not contain any explicit collisions (wiki.vegpath.org/2013-06-27_conference_call#To-do-for-Aaron > #3.2 > the following datasources ...): switched to new-style import, which adds the staging table column renaming

10209 07/10/2013 02:32 AM Aaron Marcuse-Kubitza

inputs/*/*/map.csv for CSV tables with a row_num column: added missing row_num entry, which is needed by the staging table column renaming to make the order of the map.csv columns match the order in the staging table

9882 06/12/2013 10:49 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: genus->taxonlabel.taxonomicname: filter out genera that contain numbers (using new _filter_genus()), which break TNRS and prevent it from matching any other parts of the name. later, these genera can instead be moved to the end of the name, where TNRS will correctly match them as Unmatched_terms.

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