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Revision 1207

DwC mappings: Fixed user-defined field mappings according to Brad Boyle's changes

View differences:

inputs/NYBG/test/import.specimens.out.ref
1
Inserted 65 new rows into database
1
Inserted 60 new rows into database
inputs/NYBG/test/VegBIEN.specimens.xml.ref
31 31
                                        </namedplace>
32 32
                                    </namedplace_id>
33 33
                                </locationdetermination>
34
                                <locationnarrative>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</locationnarrative>
34
                                <locationnarrative>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station; habitat: Floodplain forest</locationnarrative>
35 35
                                <elevation>350.0</elevation>
36 36
                                <elevationrange>0.0</elevationrange>
37 37
                                <locationdetermination>
......
42 42
                                <centerlongitude>-71.40000000</centerlongitude>
43 43
                            </location>
44 44
                        </location_id>
45
                        <commclass><commdetermination><commconcept_id><commconcept><commname_id><commname><commname>Floodplain forest</commname></commname></commname_id></commconcept></commconcept_id></commdetermination></commclass>
46 45
                        <obsstartdate>1984-08-20</obsstartdate>
47 46
                    </locationevent>
48 47
                </locationevent_id>
inputs/NYBG/maps/DwC.specimens.csv
3 3
"InstitutionCode",,"Map to nothing so it doesn't overwrite the auto-generated institutionCode"
4 4
"IdentifiedDate",,
5 5
"CollectedDate",,
6
"Locality","Locality/_merge/1",
6 7
"MinimumElevation","MinimumElevation/_nullIf:[null=.]/value",
7 8
"Notes","Notes/_merge/1",
8
"Habitat","habitat/_merge/1",
9
"Habitat","habitat",
9 10
"PlantFungusDescription","Notes/_merge/2/_label[label=""plant fungus""]/value",
10
"Substrate","bien.substrate",
11
"Vegetation","habitat/_merge/2",
11
"Substrate","Locality/_merge/2/_label[label=""substrate""]/value",
12
"Vegetation","Locality/_merge/3/_label[label=""vegetation""]/value",
12 13
"UniqueNYInternalRecordNumber","occurrenceID",
inputs/NYBG/maps/DwC.specimens.full.csv
21 21
JulianDay,JulianDay
22 22
Kingdom,Kingdom
23 23
Latitude,Latitude
24
Locality,Locality
24
Locality,Locality/_merge/1,
25
Substrate,"Locality/_merge/2/_label[label=""substrate""]/value",
26
Vegetation,"Locality/_merge/3/_label[label=""vegetation""]/value",
25 27
Longitude,Longitude
26 28
MaximumDepth,MaximumDepth
27 29
MaximumElevation,MaximumElevation
......
57 59
basisOfRecord,basisOfRecord
58 60
bed,bed
59 61
behavior,behavior
60
Substrate,bien.substrate,
61
bien.substrate,bien.substrate
62 62
catalogNumber,catalogNumber
63 63
class,class
64 64
collectionCode,collectionCode
......
114 114
georeferencedBy,georeferencedBy
115 115
georeferencedDate,georeferencedDate
116 116
group,group
117
Habitat,habitat,
117 118
habitat,habitat
118
Habitat,habitat/_merge/1,
119
Vegetation,habitat/_merge/2,
120 119
higherClassification,higherClassification
121 120
higherGeography,higherGeography
122 121
higherGeographyID,higherGeographyID
inputs/NYBG/maps/VegBIEN.specimens.csv
9 9
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89
10 10
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
11 11
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
12
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/1,,68
13
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
14
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
12
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
13
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
14
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2/_merge/1,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
15
Substrate,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2/_merge/2/_label[label=""substrate""]/value","Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
16
Vegetation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2/_merge/3/_label[label=""vegetation""]/value","Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
17
Habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
18
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
15 19
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
16 20
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
17 21
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
......
22 26
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
23 27
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
24 28
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
25
habitat,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
26
Habitat,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname/_merge/1,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
27
Vegetation,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname/_merge/2,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
28
Substrate,/*_id/taxonoccurrence/*_id/locationevent/landscapenarrative,,
29
bien.substrate,/*_id/taxonoccurrence/*_id/locationevent/landscapenarrative,,
30 29
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
31 30
DayCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_date/day,,44
32 31
MonthCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_date/month,,44
inputs/NYBG-CSV/test/import.specimens.out.ref
1
Inserted 65 new rows into database
1
Inserted 60 new rows into database
inputs/NYBG-CSV/test/VegBIEN.specimens.xml.ref
31 31
                                        </namedplace>
32 32
                                    </namedplace_id>
33 33
                                </locationdetermination>
34
                                <locationnarrative>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</locationnarrative>
34
                                <locationnarrative>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station; habitat: Floodplain forest</locationnarrative>
35 35
                                <elevation>350.0</elevation>
36 36
                                <elevationrange>0.0</elevationrange>
37 37
                                <locationdetermination>
......
42 42
                                <centerlongitude>-71.40</centerlongitude>
43 43
                            </location>
44 44
                        </location_id>
45
                        <commclass><commdetermination><commconcept_id><commconcept><commname_id><commname><commname>Floodplain forest</commname></commname></commname_id></commconcept></commconcept_id></commdetermination></commclass>
46 45
                        <obsstartdate>1984-08-20</obsstartdate>
47 46
                    </locationevent>
48 47
                </locationevent_id>
inputs/NYBG-CSV/maps/DwC.specimens.csv
1 1
"NYBG-CSV[DwC]","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionCode=$/_ignore/inLabel]/","Comments"
2 2
"key",,
3 3
"InstitutionCode",,"Map to nothing so it doesn't overwrite the auto-generated institutionCode"
4
"Locality","Locality/_merge/1",
4 5
"MinimumElevation","MinimumElevation/_nullIf:[null=.]/value",
5 6
"Notes","Notes/_merge/1",
6
"Habitat","habitat/_merge/1",
7
"Habitat","habitat",
7 8
"PlantFungusDescription","Notes/_merge/2/_label[label=""plant fungus""]/value",
8
"Substrate","bien.substrate",
9
"Vegetation","habitat/_merge/2",
9
"Substrate","Locality/_merge/2/_label[label=""substrate""]/value",
10
"Vegetation","Locality/_merge/3/_label[label=""vegetation""]/value",
10 11
"UniqueNYInternalRecordNumber","occurrenceID",
inputs/NYBG-CSV/maps/DwC.specimens.full.csv
21 21
JulianDay,JulianDay
22 22
Kingdom,Kingdom
23 23
Latitude,Latitude
24
Locality,Locality
24
Locality,Locality/_merge/1,
25
Substrate,"Locality/_merge/2/_label[label=""substrate""]/value",
26
Vegetation,"Locality/_merge/3/_label[label=""vegetation""]/value",
25 27
Longitude,Longitude
26 28
MaximumDepth,MaximumDepth
27 29
MaximumElevation,MaximumElevation
......
57 59
basisOfRecord,basisOfRecord
58 60
bed,bed
59 61
behavior,behavior
60
Substrate,bien.substrate,
61
bien.substrate,bien.substrate
62 62
catalogNumber,catalogNumber
63 63
class,class
64 64
collectionCode,collectionCode
......
114 114
georeferencedBy,georeferencedBy
115 115
georeferencedDate,georeferencedDate
116 116
group,group
117
Habitat,habitat,
117 118
habitat,habitat
118
Habitat,habitat/_merge/1,
119
Vegetation,habitat/_merge/2,
120 119
higherClassification,higherClassification
121 120
higherGeography,higherGeography
122 121
higherGeographyID,higherGeographyID
inputs/NYBG-CSV/maps/VegBIEN.specimens.csv
9 9
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89
10 10
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
11 11
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
12
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/1,,68
13
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
14
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
12
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
13
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
14
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2/_merge/1,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
15
Substrate,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2/_merge/2/_label[label=""substrate""]/value","Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
16
Vegetation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2/_merge/3/_label[label=""vegetation""]/value","Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
17
Habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
18
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
15 19
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
16 20
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
17 21
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
......
22 26
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
23 27
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
24 28
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
25
habitat,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
26
Habitat,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname/_merge/1,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
27
Vegetation,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname/_merge/2,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
28
Substrate,/*_id/taxonoccurrence/*_id/locationevent/landscapenarrative,,
29
bien.substrate,/*_id/taxonoccurrence/*_id/locationevent/landscapenarrative,,
30 29
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
31 30
DayCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_date/day,,44
32 31
MonthCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_date/month,,44
mappings/DwC.self.specimens.csv
12 12
locality,locality
13 13
Locality,Locality
14 14
verbatimLocality,verbatimLocality
15
habitat,habitat
15 16
MaximumElevation,MaximumElevation
16 17
maximumElevationInMeters,maximumElevationInMeters
17 18
MinimumElevation,MinimumElevation
......
22 23
decimalLongitude,decimalLongitude
23 24
Longitude,Longitude
24 25
verbatimLongitude,verbatimLongitude
25
habitat,habitat
26
bien.substrate,bien.substrate
27 26
eventDate,eventDate
28 27
DayCollected,DayCollected
29 28
MonthCollected,MonthCollected
mappings/for_review/DwC2-VegBIEN.specimens.csv
4 4
county,//*_id/namedplace[placesystem=county]/placename,,66
5 5
coordinatePrecision,//location/locationdetermination[]/coordsaccuracy/_noCV/value,,89
6 6
footprintWKT,//location/locationdetermination[]/footprintgeometry_dwc,,91
7
locality,//location/locationnarrative/_alt/1,,68
8
verbatimLocality,//location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
7
locality,//location/locationnarrative/_merge/1,,68
8
verbatimLocality,//location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
9
habitat,"//location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
9 10
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
10 11
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
11 12
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/latitude,centerlatitude}/_alt/1/_nullIf/value",,85
12 13
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/latitude,centerlatitude}/_alt/2/_nullIf/value",,81
13 14
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/longitude,centerlongitude}/_alt/1/_nullIf/value",,86
14 15
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/longitude,centerlongitude}/_alt/2/_nullIf/value",,82
15
habitat,//*/commname,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
16
bien.substrate,//locationevent/landscapenarrative,,
17 16
eventDate,//locationevent/obsstartdate,,44
18 17
maximumDepthInMeters,//waterdepth/max,,75
19 18
minimumDepthInMeters,//waterdepth/min,,74
mappings/DwC-VegBIEN.specimens.csv
9 9
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89
10 10
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
11 11
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
12
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/1,,68
13
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
14
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
12
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
13
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
14
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
15
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
15 16
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
16 17
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
17 18
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
......
22 23
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
23 24
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
24 25
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
25
habitat,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
26
bien.substrate,/*_id/taxonoccurrence/*_id/locationevent/landscapenarrative,,
27 26
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
28 27
DayCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_date/day,,44
29 28
MonthCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_date/month,,44
mappings/DwC2-VegBIEN.specimens.csv
4 4
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
5 5
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89
6 6
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
7
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/1,,68
8
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
7
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
8
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
9
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
9 10
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
10 11
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
11 12
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
12 13
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
13 14
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
14 15
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
15
habitat,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
16
bien.substrate,/*_id/taxonoccurrence/*_id/locationevent/landscapenarrative,,
17 16
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
18 17
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
19 18
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74

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