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1
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**WARNING**: this might not be an exhaustive list
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3
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currently visible:
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-----
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5
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Barbara Dobrin:
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6
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot.zip
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7
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot/File1.sql
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8
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot/File2.sql
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9
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot/File3.sql
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10
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot/File4.sql
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11
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot/File5.sql
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12
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot/File6.sql
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13
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot/File7.sql
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14
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/ScriptsAnnot/KEY.docx
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15
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schemas/VegBIEN/growth_forms/Barbara_Dobrin.parsing.scripts/stage2Ed.sql
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16
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17
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Bob:
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18
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schemas/VegBank/VegBank_Data_Model.with_Collections_intro.ppt
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19
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schemas/VegBIEN/planning/BIEN_OctWG-Whtbrd1.jpg
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20
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schemas/VegBIEN/planning/BIEN_OctWG-Whtbrd2.jpg
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21
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schemas/VegBIEN/planning/BIEN_OctWG-Whtbrd3.jpg
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22
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schemas/VegBIEN/planning/BIEN_OctWG-Whtbrd4.jpg
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23
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schemas/VegBIEN/planning/methodAttributeExamples.xlsx
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24
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schemas/VegBIEN/planning/New-DD.xlsx
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25
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26
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Bob+Mike Lee:
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27
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schemas/VegBIEN/planning/methodAttributeExamples_MTL.xlsx
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28
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29
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Brad (some are open-source, but we need to figure out which):
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30
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inputs/BIEN2.datasources.xlsx
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31
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inputs/FIA/_src/FIA tables and columns to import to BIEN.docx
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32
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inputs/FIA/_src/Recommended FIA filter criteria for BIEN.docx
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33
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inputs/NY/verify/specimens.ref.sql
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34
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inputs/SALVIAS/verify/plots.ref.sql
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35
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planning/goals/_archive/BIEN3_derived_data_products.docx
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36
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planning/goals/BIEN_3_derived_data_products_NormalizedDB_only.docx
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37
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planning/resources/taxonomy/Nomenclature_excerpt.ppt
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38
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planning/workflow/bien3_architecture.pptx
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39
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planning/workflow/bien3_architecture/stage_I.png
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40
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planning/workflow/bien3_architecture/stage_II.png
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41
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planning/workflow/bien3_architecture/stage_III.png
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42
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planning/workflow/bien3_architecture/stage_IV.png
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43
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planning/workflow/bien3_architecture/stages.png
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44
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planning/workflow/normalized_vs_denormalized/bien3_architecture_denormalized.pptx
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45
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planning/workflow/normalized_vs_denormalized/bien3_architecture_normalized.pptx
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46
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planning/workflow/normalized_vs_denormalized/denormalized_import.png
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47
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planning/workflow/normalized_vs_denormalized/denormalized.generic_standardizations.png
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48
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planning/workflow/normalized_vs_denormalized/normalized_import.png
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49
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planning/workflow/validation/_archive/BIEN2 GeoValidation Workflow.docx
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50
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planning/workflow/validation/_archive/BIEN2 Validation Workflow.docx
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51
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planning/workflow/validation/_archive/BIEN2_Analytical_DB_overview.docx
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52
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planning/workflow/validation/CreateViews.UnixShellScript
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53
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planning/workflow/validation/GeoDistKM.sql.txt
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54
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schemas/BIEN_logo.png
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55
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schemas/BIEN_logo.small.png
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56
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schemas/BIEN2/datasource_schema/bien_web_datasource_schema.mwb
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57
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schemas/BIEN2/datasource_schema/bien_web_datasource_schema.sql
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58
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schemas/BIEN2/datasource_schema/BIEN2_datasource_schema.png
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59
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schemas/DwC/DwC_bien.xlsx
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60
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schemas/VegBIEN/attribution/BIEN 3 data use and attribution.docx
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61
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schemas/VegBIEN/taxonomy/higherPlantGroup.xlsx
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62
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schemas/VegCore/Brad_Boyle/BIEN 3 data use and attribution.docx
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63
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schemas/VegCore/Brad_Boyle/BIEN database entities related to data provenance and ownership.docx
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64
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schemas/VegCore/Brad_Boyle/vegbien_identifier_examples.xlsx
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65
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schemas/VegCore/Brad_Boyle/vegbien_identifiers.xlsx
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66
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67
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Brad+Bob:
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68
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planning/meetings/2010-12-08.working_group/BIEN3-plan.docx
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69
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70
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UArizona? (some are open-source, but we need to figure out which):
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71
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BIEN2/traits_observation_counts.xls
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72
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planning/goals/BIEN deliverables.png
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73
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planning/goals/BIEN3_derived_data_products.docx
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74
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planning/goals/iPlant_BIEN_Proposal_Final.pdf
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75
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planning/goals/use_cases/BIEN_data_use_cases.doc
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76
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planning/goals/use_cases/rare_species.png
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77
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planning/goals/use_cases/Trait_BIEN_data_use_case.docx
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78
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planning/meetings/2011-10-24~28.working_group/BIEN 3 database summary notes from brad_v3.docx
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79
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planning/meetings/2011-10-24~28.working_group/BIEN3 database breakaway session.docx
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80
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planning/meetings/2011-12-01.conf_call/BIEN_db_meeting_20111201.docx
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81
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planning/meetings/2011-12-08.conf_call/BIEN_db_meeting_20111208.docx
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82
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planning/meetings/2011-12-15.conf_call/BIEN_db_meeting_20111215.docx
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83
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planning/meetings/2012-01-05.conf_call/BIEN_db_meeting_20120105.docx
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84
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planning/meetings/2012-01-12.conf_call/BIEN_db_meeting_20120112.docx
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85
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planning/meetings/2012-01-12.conf_call/BIEN_db_proposed_agenda_20120112.docx
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86
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planning/meetings/2012-02-03.conf_call/BIEN_db_meeting_20120203.docx
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87
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planning/meetings/2012-02-24.conf_call/12-02-24 BIEN db.docx
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88
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planning/meetings/2012-03-02.conf_call/12-03-02 BIEN db.docx
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89
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planning/meetings/2012-03-16.conf_call/12-03-16_BIEN_db.docx
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90
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planning/meetings/2012-11-26~30.working_group/Potential validations on BIEN data 1 Dec.docx
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91
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planning/meetings/2012-11-26~30.working_group/Potential validations on BIEN data.docx
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92
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planning/timeline/milestones/_archive/BIEN3 Milestones and Development Timeline_MLN2.docx
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93
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planning/timeline/milestones/_archive/BIEN3 Milestones and Development Timeline_MLN2.pdf
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94
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planning/timeline/milestones/_archive/BIEN3_milestones.2011-12-13.doc
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95
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planning/timeline/milestones/BIEN Milestone – feedback.docx
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96
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planning/timeline/milestones/BIEN3 - Progress since the 2011 working group.docx
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97
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planning/workflow/2010.working_group.white_board/Bien 3 dia.jpg
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98
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planning/workflow/2010.working_group.white_board/Dia 2.jpg
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99
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planning/workflow/2010.working_group.white_board/Diagram nceas.jpg
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100
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planning/workflow/BIEN-modArch-Dec2010 NS-SBD 1.4.ppt
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101
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schemas/BIEN2/bien2_core_schema.png
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102
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schemas/BIEN2/ERD/BIEN2_ERD.mwb
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103
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schemas/BIEN2/ERD/BIEN2_ERD.pdf
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104
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schemas/BIEN2/ERD/BIEN2_ERD.png
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105
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schemas/BIEN2/ERD/BIEN2_ERD.sql
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106
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schemas/BIEN2/ERD/BIEN2_ERD.svg
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107
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schemas/BIEN2/ERD/bien2.sql
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108
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schemas/BIEN2/ERD/bien2.with_foreign_keys.sql
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109
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schemas/BIEN2/Guide_to_the_BIEN2_database.pdf
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110
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111
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VegX:
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112
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schemas/VegX/Veg-X_elements_relationships.png
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113
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schemas/VegX/VegX_Schema_1.5.1.tables.svg
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114
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-----
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115
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deleted:
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116
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117
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anything deleted with a commit message containing "copyright scrub"
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118
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119
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potentially some things deleted for reasons other than copyright scrubbing,
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120
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which would be missing the "copyright scrub" tag. this applies especially to:
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121
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- things deleted before r12121 (2014-02-07), when this problem became apparent
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122
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- things deleted before r11705 (2013-11-21), when we started copyright scrubbing
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