Project

General

Profile

Statistics
| Revision:

root/trunk/inputs/test_taxonomic_names @ 12406

Name Size Revision Age Author Comment
  Source 11396 over 10 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  Taxon 11396 over 10 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  _scrub 10786 almost 11 years Aaron Marcuse-Kubitza inputs/.TNRS/data.sql: re-ran TNRS using `input...
  logs 10169 almost 11 years Aaron Marcuse-Kubitza inputs/*/logs: updated svn:ignore
  verify 12018 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
Makefile 27 Bytes 10177 almost 11 years Aaron Marcuse-Kubitza inputs/*/: added top-level Makefile which inclu...
README.TXT 1.13 KB 5217 over 11 years Aaron Marcuse-Kubitza Added inputs/test_taxonomic_names/README.TXT wi...
import_order.txt 13 Bytes 10109 about 11 years Aaron Marcuse-Kubitza empty inputs/*/import_order.txt: added subdirs ...
run 87 Bytes 10260 almost 11 years Aaron Marcuse-Kubitza inputs/*/ which do not contain any explicit col...
table.run 81 Bytes 10179 almost 11 years Aaron Marcuse-Kubitza inputs/*/: added table.run for use by the table...
test_scrub 937 Bytes 10788 almost 11 years Aaron Marcuse-Kubitza inputs/test_taxonomic_names/test_scrub: added s...
  • svn:ignore: *

Latest revisions

# Date Author Comment
12018 02/02/2014 12:49 AM Aaron Marcuse-Kubitza

inputs/input.Makefile: add!: verify/: also svn:ignore *.tsv, *.txt
11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).
11396 10/21/2013 07:14 PM Aaron Marcuse-Kubitza

fix: bin/map: put template: comment out the "Put template:" label so that the output is valid XML, and displays properly in a browser rather than showing a syntax error
11107 09/29/2013 08:58 PM Aaron Marcuse-Kubitza

bugfix: mappings/VegCore-VegBIEN.csv: nest all taxonoccurrences inside a stratum event, so that the parent locationevent is always fully populated before child locationevents point to it. (previously, a stub parent event was created when the child event was imported first, which blocked the fully-populated parent event from being inserted later on.) this uses auto-folding (for VegBank/CVS) and auto-forwarding (for other datasources) to prune empty stratum events for taxonoccurrences that don't have strata. (see wiki.vegpath.org/Auto-folding, wiki.vegpath.org/Auto-forwarding for more info about these normalization techniques.) note that the inserted row counts stay exactly the same for all datasources except VegBank (which was being fixed), indicating that this signficant change to the mappings did not change the semantics of the import of taxonoccurrences.
10866 09/04/2013 11:06 PM Aaron Marcuse-Kubitza

inputs/*/*/test.xml.ref: updated source.shortname for new datasource name, which now starts out with .new suffix
10788 08/27/2013 10:34 PM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/test_scrub: added step to update inputs/.TNRS/data.sql to the now-refreshed TNRS sample data (this updating step is now automated)
10786 08/27/2013 10:14 PM Aaron Marcuse-Kubitza

inputs/.TNRS/data.sql: re-ran TNRS using `inputs/test_taxonomic_names/test_scrub; rm=1 inputs/.TNRS/data.sql.run export_`
10412 07/25/2013 08:10 AM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/_scrub/TNRS_results.ppt: highlighted the sample row and related rows
10411 07/25/2013 08:04 AM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/_scrub/TNRS_results.xls: moved arrows to TNRS_results.ppt so they can be changed more easily
10410 07/25/2013 07:51 AM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/_scrub/TNRS_results.ppt: TNRS.tnrs: added diagram labels for the various names and steps

View revisions

Also available in: Atom