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1
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SELECT '# specimen replicates' AS ___;
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2
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SELECT count(*) AS count FROM nybg_raw;
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3
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|
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4
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SELECT '# families' AS ___;
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5
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SELECT count(DISTINCT Family) AS count FROM nybg_raw;
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6
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|
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7
|
SELECT '# genera' AS ___;
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8
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SELECT count(DISTINCT Genus) AS count FROM nybg_raw;
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9
|
|
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10
|
SELECT '# species' AS ___;
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11
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SELECT count(DISTINCT Genus, Species) AS count FROM nybg_raw;
|
|
12
|
|
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13
|
/*
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14
|
SELECT
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15
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(
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16
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SELECT COUNT(DISTINCT Family) FROM nybg_raw WHERE Family IS NOT NULL
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|
17
|
) AS families,
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|
18
|
(
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|
19
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SELECT COUNT(DISTINCT Genus) FROM nybg_raw WHERE Genus IS NOT NULL
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|
20
|
) AS genera,
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|
21
|
(
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|
22
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SELECT COUNT(DISTINCT Genus, Species) FROM nybg_raw
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|
23
|
WHERE Genus IS NOT NULL AND Species IS NOT NULL
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|
24
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) AS species;
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|
25
|
|
|
26
|
SELECT DISTINCT CONCAT_WS(' ', Genus, Species) AS Species
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|
27
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FROM nybg_raw
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|
28
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WHERE Genus IS NOT NULL AND Species IS NOT NULL;
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|
29
|
|
|
30
|
SELECT DISTINCT Genus AS Genera
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31
|
FROM nybg_raw
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|
32
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WHERE Genus IS NOT NULL;
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|
33
|
|
|
34
|
SELECT DISTINCT Family as Families
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|
35
|
FROM nybg_raw
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|
36
|
WHERE Family IS NOT NULL;
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37
|
|
|
38
|
SELECT ScientificName, Genus, Species, Subspecies, ScientificNameAuthor
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|
39
|
FROM nybg_raw
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|
40
|
LIMIT 25;
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41
|
|
|
42
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SELECT ScientificName, Genus, Species, Subspecies, ScientificNameAuthor
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|
43
|
FROM nybg_raw
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|
44
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WHERE Subspecies IS NOT NULL
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|
45
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LIMIT 15;
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46
|
|
|
47
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SELECT InstitutionCode, COUNT(*) AS records
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|
48
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FROM nybg_raw
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49
|
GROUP BY InstitutionCode;
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|
50
|
|
|
51
|
SELECT DISTINCT CollectionCode
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|
52
|
FROM nybg_raw;
|
|
53
|
|
|
54
|
SELECT DISTINCT Country, StateProvince, County
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|
55
|
FROM nybg_raw
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|
56
|
LIMIT 25;
|
|
57
|
|
|
58
|
SELECT COUNT(*) as totalRecords, COUNT(DISTINCT CatalogNumber) as uniqueCatalogNumbers
|
|
59
|
FROM nybg_raw;
|
|
60
|
|
|
61
|
SELECT CatalogNumber, COUNT(*) AS records
|
|
62
|
FROM nybg_raw
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|
63
|
GROUP BY CatalogNumber
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|
64
|
HAVING records>1;
|
|
65
|
|
|
66
|
SELECT b.CatalogNumber, DateLastModified, ScientificName, Collector, FieldNumber,
|
|
67
|
CollectedDate
|
|
68
|
FROM nybg_raw AS a JOIN (
|
|
69
|
SELECT CatalogNumber, COUNT(*) AS records
|
|
70
|
FROM nybg_raw
|
|
71
|
WHERE CatalogNumber IS NOT NULL
|
|
72
|
GROUP BY CatalogNumber
|
|
73
|
HAVING records>1
|
|
74
|
) AS b
|
|
75
|
ON a.CatalogNumber=b.CatalogNumber
|
|
76
|
ORDER BY b.CatalogNumber ASC, DateLastModified DESC;
|
|
77
|
|
|
78
|
SELECT DateLastModified, ScientificName, Collector, FieldNumber,
|
|
79
|
CollectedDate
|
|
80
|
FROM nybg_raw
|
|
81
|
WHERE CatalogNumber IS NULL
|
|
82
|
ORDER BY CatalogNumber ASC, DateLastModified DESC
|
|
83
|
LIMIT 12;
|
|
84
|
|
|
85
|
SELECT
|
|
86
|
(
|
|
87
|
SELECT COUNT(*)
|
|
88
|
FROM nybg_raw
|
|
89
|
WHERE Latitude IS NOT NULL
|
|
90
|
) AS allLats,
|
|
91
|
(
|
|
92
|
SELECT COUNT(*)
|
|
93
|
FROM nybg_raw
|
|
94
|
WHERE Latitude REGEXP '^(-|\\+){0,1}([0-9]+\\.[0-9]*|[0-9]*\\.[0-9]+|[0-9]+)$'
|
|
95
|
) AS decimalLats,
|
|
96
|
(
|
|
97
|
SELECT COUNT(*)
|
|
98
|
FROM nybg_raw
|
|
99
|
WHERE Longitude IS NOT NULL
|
|
100
|
) AS allLongs,
|
|
101
|
(
|
|
102
|
SELECT COUNT(*)
|
|
103
|
FROM nybg_raw
|
|
104
|
WHERE Longitude REGEXP '^(-|\\+){0,1}([0-9]+\\.[0-9]*|[0-9]*\\.[0-9]+|[0-9]+)$'
|
|
105
|
) AS decimalLongs;
|
|
106
|
|
|
107
|
SELECT Latitude, Longitude
|
|
108
|
FROM nybg_raw
|
|
109
|
WHERE Latitude IS NOT NULL AND Longitude IS NOT NULL
|
|
110
|
LIMIT 10;
|
|
111
|
|
|
112
|
SELECT
|
|
113
|
(
|
|
114
|
SELECT COUNT(*)
|
|
115
|
FROM nybg_raw
|
|
116
|
WHERE Latitude>90 OR Latitude<-90
|
|
117
|
) AS badLats,
|
|
118
|
(
|
|
119
|
SELECT COUNT(*)
|
|
120
|
FROM nybg_raw
|
|
121
|
WHERE Longitude>180 OR Longitude<-180
|
|
122
|
) AS badLongs;
|
|
123
|
|
|
124
|
SELECT DayCollected, MonthCollected, YearCollected
|
|
125
|
FROM nybg_raw
|
|
126
|
WHERE DayCollected IS NOT NULL OR MonthCollected IS NOT NULL OR YearCollected IS NOT NULL
|
|
127
|
LIMIT 10;
|
|
128
|
|
|
129
|
SELECT
|
|
130
|
(
|
|
131
|
SELECT COUNT(*)
|
|
132
|
FROM nybg_raw
|
|
133
|
WHERE NOT(DayCollected REGEXP '^-?[0-9]+$')
|
|
134
|
OR NOT(MonthCollected REGEXP '^-?[0-9]+$')
|
|
135
|
OR NOT(YearCollected REGEXP '^-?[0-9]+$')
|
|
136
|
) AS badDateCollected,
|
|
137
|
(
|
|
138
|
SELECT COUNT(*)
|
|
139
|
FROM nybg_raw
|
|
140
|
WHERE NOT(DayIdentified REGEXP '^-?[0-9]+$')
|
|
141
|
OR NOT(MonthIdentified REGEXP '^-?[0-9]+$')
|
|
142
|
OR NOT(YearIdentified REGEXP '^-?[0-9]+$')
|
|
143
|
) AS badDateIdentified;
|
|
144
|
|
|
145
|
SELECT Locality
|
|
146
|
FROM nybg_raw
|
|
147
|
WHERE Locality IS NOT NULL
|
|
148
|
LIMIT 10;
|
|
149
|
|
|
150
|
SELECT PlantFungusDescription
|
|
151
|
FROM nybg_raw
|
|
152
|
WHERE PlantFungusDescription IS NOT NULL
|
|
153
|
LIMIT 10;
|
|
154
|
|
|
155
|
SELECT Habitat, Vegetation
|
|
156
|
FROM nybg_raw
|
|
157
|
WHERE Habitat IS NOT NULL OR Vegetation IS NOT NULL
|
|
158
|
LIMIT 10;
|
|
159
|
*/
|
