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| Revision:
Name Size Revision Age Author Comment
  BIEN2 7772 almost 12 years Aaron Marcuse-Kubitza Added schemas/BIEN2/ERD/
  DiGIR 7767 almost 12 years Aaron Marcuse-Kubitza Added schemas/DiGIR/gbif-occurrencestore.digir....
  DwC 8507 over 11 years Aaron Marcuse-Kubitza web/**/.htaccess: RewriteRules: ensured flags a...
  TAPIR 7789 almost 12 years Aaron Marcuse-Kubitza Added schemas/TAPIR/SpeciesLink.tapir_request.t...
  TCS 10656 over 11 years Aaron Marcuse-Kubitza schemas/VegX/.htaccess, TCS/.htaccess: prepend ...
  VegBIEN 11281 about 11 years Aaron Marcuse-Kubitza schemas/VegBIEN/attribution/BIEN 3 data use and...
  VegBank 9671 over 11 years Aaron Marcuse-Kubitza *.url: mailto URLs: use the standard e-mail dot...
  VegCore 12088 almost 11 years Aaron Marcuse-Kubitza schemas/VegCore/vegbien_identifier_examples.xls...
  VegX 12090 almost 11 years Aaron Marcuse-Kubitza removed schemas/VegX/run.py, which is a duplica...
.htaccess 349 Bytes 8514 over 11 years Aaron Marcuse-Kubitza bugfix: schemas/.htaccess: corrected $innermost...
BIEN_logo.png 165 KB 7740 almost 12 years Aaron Marcuse-Kubitza Added schemas/BIEN_logo.png from the bien.nceas...
BIEN_logo.png.url 61 Bytes 7740 almost 12 years Aaron Marcuse-Kubitza Added schemas/BIEN_logo.png from the bien.nceas...
BIEN_logo.small.png 9.84 KB 7739 almost 12 years Aaron Marcuse-Kubitza Renamed schemas/BIEN_logo.png to BIEN_logo.smal...
Makefile 3.46 KB 12146 almost 11 years Aaron Marcuse-Kubitza schemas/Makefile: vegbien.sql: support auxiliar...
filter_ERD.csv 1.45 KB 7060 almost 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: sync_analytical_*_to_view(...
my.cnf 3.48 KB 9619 over 11 years Aaron Marcuse-Kubitza schemas/my.cnf: added innodb_file_per_table so ...
pg_hba.Mac.conf 4.64 KB 11662 about 11 years Aaron Marcuse-Kubitza *Makefile, schemas/*.Mac.conf: upgraded to Post...
pg_hba.conf 4.26 KB 11451 about 11 years Aaron Marcuse-Kubitza bugfix: schemas/pg_hba.conf: don't allow ident ...
pg_ident.Mac.conf 1.65 KB 10122 over 11 years Aaron Marcuse-Kubitza schemas/pg_ident.Mac.conf: added postgres map m...
postgresql.Mac.conf 20.7 KB 11662 about 11 years Aaron Marcuse-Kubitza *Makefile, schemas/*.Mac.conf: upgraded to Post...
postgresql.Mac.conf.run 80 Bytes 10833 over 11 years Aaron Marcuse-Kubitza added schemas/postgresql*.conf.run, which insta...
postgresql.conf 21.2 KB 11797 about 11 years Aaron Marcuse-Kubitza schemas/postgresql.conf: work_mem: documented t...
postgresql.conf.run 80 Bytes 10833 over 11 years Aaron Marcuse-Kubitza added schemas/postgresql*.conf.run, which insta...
postgresql.nimoy.conf 17.1 KB 2778 over 12 years Aaron Marcuse-Kubitza schemas/postgresql.nimoy.conf: shared_buffers: ...
py_util.sql 6.42 KB 12235 almost 11 years Aaron Marcuse-Kubitza schemas/*.sql: make sure every COMMENT starts a...
temp.sql 357 Bytes 2980 over 12 years Aaron Marcuse-Kubitza Added temp schema to store intermediate tables ...
tree_cross-links.sql 4.69 KB 5829 about 12 years Aaron Marcuse-Kubitza schemas/tree_cross-links.sql: Updated for schem...
util.sql 91.8 KB 12514 almost 11 years Aaron Marcuse-Kubitza schemas/util.sql: eval2val(): made it STABLE so...
vegbien.ERD.1_pg.pdf 749 KB 12051 almost 11 years Aaron Marcuse-Kubitza schemas/vegbien.ERD.mwb: regenerated exports
vegbien.ERD.mwb 156 KB 12522 almost 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: location.top_plot: renamed...
vegbien.ERD.pdf 596 KB 12051 almost 11 years Aaron Marcuse-Kubitza schemas/vegbien.ERD.mwb: regenerated exports
vegbien.ERD.png 623 KB 12051 almost 11 years Aaron Marcuse-Kubitza schemas/vegbien.ERD.mwb: regenerated exports
vegbien.ERD.poster.core.pdf 315 KB 6323 about 12 years Aaron Marcuse-Kubitza Added schemas/vegbien.ERD.poster.core.pdf
vegbien.ERD.poster.core.print_options.png 74 KB 6324 about 12 years Aaron Marcuse-Kubitza Added schemas/vegbien.ERD.poster.core.print_opt...
vegbien.ERD.poster.pdf 776 KB 6328 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.ERD.poster.pdf: Updated to 33x5...
vegbien.ERD.svg 1.42 MB 12051 almost 11 years Aaron Marcuse-Kubitza schemas/vegbien.ERD.mwb: regenerated exports
vegbien.my.sql 284 KB 12521 almost 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: location.top_plot: renamed...
vegbien.sql 440 KB 12521 almost 11 years Aaron Marcuse-Kubitza schemas/vegbien.sql: location.top_plot: renamed...
  • svn:ignore: *.bak *.log

Latest revisions

# Date Author Comment
12522 02/27/2014 04:12 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: location.top_plot: renamed to plot_location_id, as requested by Brad (wiki.vegpath.org/2014-02-27_conference_call#schema-changes)

12521 02/27/2014 03:51 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: location.top_plot: renamed to plot_location_id, as requested by Brad (wiki.vegpath.org/2014-02-27_conference_call#schema-changes)

12520 02/27/2014 02:20 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: source_by_shortname(): documented exact time that the slow query ran for (5013s = ~1.5 hours)

12519 02/27/2014 02:07 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: public_validations: schema comment: documented how to sync the queries with schemas/vegbien.sql

12518 02/27/2014 02:05 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: public_validations.rm_all_queries(): when called with no args, operate on public_validations instead of all schemas, since this is the more common use case (replacing just the output queries, not both input and output)

12517 02/27/2014 01:49 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: rm_query_group(): documented that this only removes validations output queries (in public_validations), as it is designed for use in updating all output queries at once from the testing DB

12516 02/27/2014 01:27 PM Aaron Marcuse-Kubitza

bugfix: *.sql: public.source_by_shortname(): need to wrap it in a nested SELECT because Postgres incorrectly does not constant-fold (inline) it, leading to a slowdown when it is therefore run many times. this is done using the steps at wiki.vegpath.org/Postgres_queries#wrap-function-call-in-nested-SELECT .

12515 02/27/2014 12:43 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: source_by_shortname(): documented that it must be run as a nested SELECT, because otherwise Postgres will not inline it. not inlining causes the query to be run for each row in a table of potentially millions, and creates a significant slowdown (eg. >1.5 hours for SALVIAS._plots_06_list_of_plots_with_stem_measurements)

12514 02/27/2014 07:59 AM Aaron Marcuse-Kubitza

schemas/util.sql: eval2val(): made it STABLE so that functions that use it can themselves be inlined. (Postgres apparently ignores the STABLE qualifier, without warning, if the function contains any VOLATILE statements.)

12513 02/27/2014 06:51 AM Aaron Marcuse-Kubitza

fix: schemas/vegbien.sql: source_by_shortname(): needs to be declared STABLE so it can be constant-folded and only run once per query. (it had previously been VOLATILE because of constraints imposed on functions that run `SET LOCAL search_path`.)

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