Revision 127
Added by Aaron Marcuse-Kubitza almost 13 years ago
| scripts/test/input/SALVIAS.plots.sh | ||
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#!/bin/sh |
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export in_host=localhost in_user=vegbank in_password=vegbank in_database=vegbank |
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| scripts/test/accepted_output/SALVIAS.organisms.CSV.VegX.xml | ||
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<?xml version="1.0" ?> |
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<VegX> |
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<individualOrganismObservations> |
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<individualOrganismObservation id="0"> |
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<individualOrganismID>0</individualOrganismID> |
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<plotObservationID>0</plotObservationID> |
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<simpleUserdefined> |
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<name>censusNo</name> |
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<value>1</value> |
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</simpleUserdefined> |
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<simpleUserdefined> |
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<name>individualCode</name> |
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<value>10</value> |
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</simpleUserdefined> |
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<simpleUserdefined> |
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<name>habit</name> |
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<value>T</value> |
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</simpleUserdefined> |
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<simpleUserdefined> |
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<name>count</name> |
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<value>1</value> |
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</simpleUserdefined> |
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<diameterBaseDistance> |
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<baseDistance>1.37</baseDistance> |
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<diameter>662</diameter> |
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</diameterBaseDistance> |
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</individualOrganismObservation> |
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<individualOrganismObservation id="1"> |
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<individualOrganismID>1</individualOrganismID> |
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<plotObservationID>1</plotObservationID> |
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<simpleUserdefined> |
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<name>censusNo</name> |
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<value>1</value> |
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</simpleUserdefined> |
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<simpleUserdefined> |
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<name>individualCode</name> |
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<value>100</value> |
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</simpleUserdefined> |
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<simpleUserdefined> |
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<name>habit</name> |
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<value>T</value> |
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</simpleUserdefined> |
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<simpleUserdefined> |
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<name>count</name> |
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<value>1</value> |
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</simpleUserdefined> |
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<diameterBaseDistance> |
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<baseDistance>1.37</baseDistance> |
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<diameter>215</diameter> |
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</diameterBaseDistance> |
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</individualOrganismObservation> |
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</individualOrganismObservations> |
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<individualOrganisms> |
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<individualOrganism id="0"> |
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<taxonNameUsageConceptsID>0</taxonNameUsageConceptsID> |
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<identificationLabel>7</identificationLabel> |
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<identificationLabel>8</identificationLabel> |
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</individualOrganism> |
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<individualOrganism id="1"> |
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<taxonNameUsageConceptsID>1</taxonNameUsageConceptsID> |
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<identificationLabel>84</identificationLabel> |
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<identificationLabel>91</identificationLabel> |
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</individualOrganism> |
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</individualOrganisms> |
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<taxonNameUsageConcepts> |
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<taxonNameUsageConcept id="0"> |
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<voucher>607771</voucher> |
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<authorCode>14598</authorCode> |
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</taxonNameUsageConcept> |
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<taxonNameUsageConcept id="1"> |
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<voucher>607722</voucher> |
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<authorCode>14669</authorCode> |
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</taxonNameUsageConcept> |
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</taxonNameUsageConcepts> |
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<plotObservations> |
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<plotObservation id="0"> |
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<plotUniqueIdentifierID>0</plotUniqueIdentifierID> |
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<obsStartDate>2001-01-01</obsStartDate> |
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</plotObservation> |
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<plotObservation id="1"> |
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<plotUniqueIdentifierID>2</plotUniqueIdentifierID> |
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<obsStartDate>2001-01-01</obsStartDate> |
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</plotObservation> |
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</plotObservations> |
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<plots> |
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<plot id="0"> |
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<relatedSpatialItem> |
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<relatedItem> |
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<relationshipType>parentPlot</relationshipType> |
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<relatedItemID>1</relatedItemID> |
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</relatedItem> |
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</relatedSpatialItem> |
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<plotUniqueIdentifier>1</plotUniqueIdentifier> |
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</plot> |
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<plot id="1"> |
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<plotUniqueIdentifier>ALP-11</plotUniqueIdentifier> |
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</plot> |
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<plot id="2"> |
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<relatedSpatialItem> |
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<relatedItem> |
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<relationshipType>parentPlot</relationshipType> |
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<relatedItemID>3</relatedItemID> |
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</relatedItem> |
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</relatedSpatialItem> |
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<plotUniqueIdentifier>4</plotUniqueIdentifier> |
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</plot> |
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<plot id="3"> |
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<plotUniqueIdentifier>ALP-11</plotUniqueIdentifier> |
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</plot> |
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</plots> |
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<taxonDeterminations> |
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<taxonDetermination> |
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<taxonNameUsageConceptID>0</taxonNameUsageConceptID> |
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<partyWithRole> |
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<role>collector</role> |
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<partyID>0</partyID> |
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</partyWithRole> |
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</taxonDetermination> |
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<taxonDetermination> |
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<taxonNameUsageConceptID>0</taxonNameUsageConceptID> |
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<partyWithRole> |
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<role>computer</role> |
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</partyWithRole> |
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<taxonRelationshipAssertions> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>0</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>1</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>2</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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</taxonRelationshipAssertions> |
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</taxonDetermination> |
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<taxonDetermination> |
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<taxonNameUsageConceptID>0</taxonNameUsageConceptID> |
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<partyWithRole> |
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<role>identifier</role> |
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</partyWithRole> |
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<taxonRelationshipAssertions> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>3</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>4</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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</taxonRelationshipAssertions> |
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</taxonDetermination> |
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<taxonDetermination> |
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<taxonNameUsageConceptID>1</taxonNameUsageConceptID> |
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<partyWithRole> |
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<role>collector</role> |
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<partyID>1</partyID> |
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</partyWithRole> |
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</taxonDetermination> |
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<taxonDetermination> |
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<taxonNameUsageConceptID>1</taxonNameUsageConceptID> |
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<partyWithRole> |
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<role>computer</role> |
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</partyWithRole> |
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<taxonRelationshipAssertions> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>5</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>6</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>7</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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</taxonRelationshipAssertions> |
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</taxonDetermination> |
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<taxonDetermination> |
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<taxonNameUsageConceptID>1</taxonNameUsageConceptID> |
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<partyWithRole> |
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<role>identifier</role> |
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</partyWithRole> |
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<taxonRelationshipAssertions> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>8</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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<taxonRelationshipAssertion> |
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<assertion> |
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<taxonConceptID>9</taxonConceptID> |
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</assertion> |
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</taxonRelationshipAssertion> |
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</taxonRelationshipAssertions> |
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</taxonDetermination> |
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</taxonDeterminations> |
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<parties> |
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<party id="0"> |
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<individualName> |
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<surName>Vasquez</surName> |
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</individualName> |
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</party> |
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<party id="1"> |
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<individualName> |
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<surName>Vasquez</surName> |
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</individualName> |
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</party> |
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</parties> |
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<taxonConcepts> |
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<taxonConcept id="0"> |
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<Rank code="fam"/> |
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<Name>Fabaceae</Name> |
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</taxonConcept> |
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<taxonConcept id="1"> |
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<Rank code="gen"/> |
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<Name>Inga</Name> |
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</taxonConcept> |
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<taxonConcept id="2"> |
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<Rank code="sp"/> |
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<Name>indet</Name> |
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</taxonConcept> |
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<taxonConcept id="3"> |
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<Rank code="fam"/> |
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<Name>Fabaceae</Name> |
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</taxonConcept> |
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<taxonConcept id="4"> |
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<Rank code="sp"/> |
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<Name>Inga indet</Name> |
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</taxonConcept> |
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<taxonConcept id="5"> |
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<Rank code="fam"/> |
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<Name>Myristicaceae</Name> |
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</taxonConcept> |
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<taxonConcept id="6"> |
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<Rank code="gen"/> |
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<Name>Virola</Name> |
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</taxonConcept> |
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<taxonConcept id="7"> |
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<Rank code="sp"/> |
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<Name>pavonis</Name> |
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</taxonConcept> |
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<taxonConcept id="8"> |
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<Rank code="fam"/> |
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<Name>Myristicaceae</Name> |
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</taxonConcept> |
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<taxonConcept id="9"> |
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<Rank code="sp"/> |
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<Name>Virola pavonis</Name> |
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</taxonConcept> |
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</taxonConcepts> |
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</VegX> |
|
| scripts/test/accepted_output/SALVIAS.plots.CSV.VegBank.xml | ||
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<?xml version="1.0" ?> |
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<VegBank> |
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<observation id="0"> |
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<project_ID> |
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<project> |
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<projectName>RAINFOR - 1 ha Peru</projectName> |
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</project> |
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</project_ID> |
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<authorObsCode>ALP-11</authorObsCode> |
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<plot_ID> |
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<plot> |
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<confidentialityStatus>0</confidentialityStatus> |
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<authorPlotCode>ALP-11</authorPlotCode> |
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<place> |
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<namedPlace_ID> |
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<namedPlace> |
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<placeSystem>continent</placeSystem> |
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<placeName>South America</placeName> |
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</namedPlace> |
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</namedPlace_ID> |
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</place> |
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<place> |
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<namedPlace_ID> |
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<namedPlace> |
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<placeSystem>area|country|territory</placeSystem> |
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<placeName>Peru</placeName> |
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</namedPlace> |
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</namedPlace_ID> |
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</place> |
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<place> |
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<namedPlace_ID> |
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<namedPlace> |
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<placeSystem>region|state|province</placeSystem> |
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<placeName>Loreto</placeName> |
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<placeDescription>pre-Holocene; clay</placeDescription> |
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</namedPlace> |
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</namedPlace_ID> |
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</place> |
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<realLatitude>-3.95</realLatitude> |
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<realLongitude>-73.4333</realLongitude> |
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<elevation>200</elevation> |
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<area>0.44</area> |
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</plot> |
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</plot_ID> |
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<methodNarrative>1 ha, stems >= 10 cm dbh</methodNarrative> |
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<obsStartDate>1990-11-16</obsStartDate> |
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</observation> |
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<observation id="1"> |
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<project_ID> |
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<project> |
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<projectName>RAINFOR - 1 ha Peru</projectName> |
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</project> |
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</project_ID> |
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<authorObsCode>ALP-12</authorObsCode> |
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<plot_ID> |
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<plot> |
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<confidentialityStatus>0</confidentialityStatus> |
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<authorPlotCode>ALP-12</authorPlotCode> |
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<place> |
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<namedPlace_ID> |
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<namedPlace> |
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<placeSystem>continent</placeSystem> |
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<placeName>South America</placeName> |
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</namedPlace> |
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</namedPlace_ID> |
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</place> |
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<place> |
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<namedPlace_ID> |
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<namedPlace> |
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<placeSystem>area|country|territory</placeSystem> |
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<placeName>Peru</placeName> |
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</namedPlace> |
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</namedPlace_ID> |
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</place> |
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<place> |
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<namedPlace_ID> |
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<namedPlace> |
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<placeSystem>region|state|province</placeSystem> |
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<placeName>Loreto</placeName> |
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<placeDescription>pre-Holocene; white and brown sand</placeDescription> |
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</namedPlace> |
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</namedPlace_ID> |
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</place> |
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<realLatitude>-3.95</realLatitude> |
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<realLongitude>-73.4333</realLongitude> |
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<elevation>200</elevation> |
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<area>0.4</area> |
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</plot> |
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</plot_ID> |
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<methodNarrative>1 ha, stems >= 10 cm dbh</methodNarrative> |
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<obsStartDate>1990-11-16</obsStartDate> |
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</observation> |
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| 93 |
</VegBank> |
|
| scripts/test/accepted_output/SALVIAS.organisms.CSV.VegBank.xml | ||
|---|---|---|
| 1 |
<?xml version="1.0" ?> |
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| 2 |
<VegBank> |
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| 3 |
<taxonObservation id="0"> |
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| 4 |
<observation_ID> |
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| 5 |
<observation> |
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| 6 |
<plot_ID> |
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| 7 |
<plot> |
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| 8 |
<confidentialityStatus>0</confidentialityStatus> |
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| 9 |
<authorPlotCode>1</authorPlotCode> |
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| 10 |
<PARENT_ID> |
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| 11 |
<plot> |
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| 12 |
<confidentialityStatus>0</confidentialityStatus> |
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| 13 |
<authorPlotCode>ALP-11</authorPlotCode> |
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</plot> |
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</PARENT_ID> |
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</plot> |
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</plot_ID> |
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| 18 |
<obsStartDate>2001-01-01</obsStartDate> |
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| 19 |
<authorObsCode>1</authorObsCode> |
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| 20 |
</observation> |
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| 21 |
</observation_ID> |
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| 22 |
<taxonImportance> |
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| 23 |
<stemCount> |
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| 24 |
<stemLocation> |
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| 25 |
<taxonInterpretation> |
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| 26 |
<ROLE_ID> |
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| 27 |
<aux_Role> |
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| 28 |
<roleCode>collector</roleCode> |
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| 29 |
</aux_Role> |
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</ROLE_ID> |
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| 31 |
<interpretationType>Author</interpretationType> |
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<originalInterpretation>true</originalInterpretation> |
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<currentInterpretation>false</currentInterpretation> |
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| 34 |
<interpretationDate>epoch</interpretationDate> |
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| 35 |
<plantConcept_ID> |
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| 36 |
<plantConcept> |
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| 37 |
<reference_ID> |
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| 38 |
<reference/> |
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| 39 |
</reference_ID> |
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| 40 |
<plantName_ID> |
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| 41 |
<plantName> |
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| 42 |
<plantName>Inga indet</plantName> |
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| 43 |
</plantName> |
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| 44 |
</plantName_ID> |
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| 45 |
</plantConcept> |
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| 46 |
</plantConcept_ID> |
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| 47 |
<party_ID> |
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| 48 |
<party/> |
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| 49 |
</party_ID> |
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| 50 |
<museumAccessionNumber>607771</museumAccessionNumber> |
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| 51 |
<definedValue fkey="tableRecord_ID"> |
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| 52 |
<userDefined_ID> |
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| 53 |
<userDefined> |
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| 54 |
<tableName>taxonInterpretation</tableName> |
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| 55 |
<userDefinedName>censusNo</userDefinedName> |
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| 56 |
<userDefinedType>varchar</userDefinedType> |
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| 57 |
</userDefined> |
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| 58 |
</userDefined_ID> |
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| 59 |
<definedValue>1</definedValue> |
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| 60 |
</definedValue> |
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| 61 |
<definedValue fkey="tableRecord_ID"> |
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| 62 |
<userDefined_ID> |
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| 63 |
<userDefined> |
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| 64 |
<tableName>taxonInterpretation</tableName> |
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| 65 |
<userDefinedName>individualCode</userDefinedName> |
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| 66 |
<userDefinedType>varchar</userDefinedType> |
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| 67 |
</userDefined> |
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| 68 |
</userDefined_ID> |
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| 69 |
<definedValue>10</definedValue> |
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| 70 |
</definedValue> |
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| 71 |
<collectionNumber>14598</collectionNumber> |
|
| 72 |
<collector_ID> |
|
| 73 |
<party> |
|
| 74 |
<surName>Vasquez</surName> |
|
| 75 |
</party> |
|
| 76 |
</collector_ID> |
|
| 77 |
<definedValue fkey="tableRecord_ID"> |
|
| 78 |
<userDefined_ID> |
|
| 79 |
<userDefined> |
|
| 80 |
<tableName>taxonInterpretation</tableName> |
|
| 81 |
<userDefinedName>habit</userDefinedName> |
|
| 82 |
<userDefinedType>varchar</userDefinedType> |
|
| 83 |
</userDefined> |
|
| 84 |
</userDefined_ID> |
|
| 85 |
<definedValue>T</definedValue> |
|
| 86 |
</definedValue> |
|
| 87 |
</taxonInterpretation> |
|
| 88 |
<stemCode>7</stemCode> |
|
| 89 |
<stemCode>8</stemCode> |
|
| 90 |
<taxonInterpretation> |
|
| 91 |
<ROLE_ID> |
|
| 92 |
<aux_Role> |
|
| 93 |
<roleCode>computer</roleCode> |
|
| 94 |
</aux_Role> |
|
| 95 |
</ROLE_ID> |
|
| 96 |
<plantConcept_ID> |
|
| 97 |
<plantConcept> |
|
| 98 |
<plantStatus> |
|
| 99 |
<plantLevel>Family</plantLevel> |
|
| 100 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 101 |
<startDate>epoch</startDate> |
|
| 102 |
<party_ID> |
|
| 103 |
<party/> |
|
| 104 |
</party_ID> |
|
| 105 |
</plantStatus> |
|
| 106 |
<reference_ID> |
|
| 107 |
<reference/> |
|
| 108 |
</reference_ID> |
|
| 109 |
<plantName_ID> |
|
| 110 |
<plantName> |
|
| 111 |
<plantName>Fabaceae</plantName> |
|
| 112 |
</plantName> |
|
| 113 |
</plantName_ID> |
|
| 114 |
</plantConcept> |
|
| 115 |
</plantConcept_ID> |
|
| 116 |
<interpretationType>Computer (automated)</interpretationType> |
|
| 117 |
<originalInterpretation>false</originalInterpretation> |
|
| 118 |
<currentInterpretation>true</currentInterpretation> |
|
| 119 |
<interpretationDate>epoch</interpretationDate> |
|
| 120 |
<party_ID> |
|
| 121 |
<party/> |
|
| 122 |
</party_ID> |
|
| 123 |
</taxonInterpretation> |
|
| 124 |
<taxonInterpretation> |
|
| 125 |
<ROLE_ID> |
|
| 126 |
<aux_Role> |
|
| 127 |
<roleCode>computer</roleCode> |
|
| 128 |
</aux_Role> |
|
| 129 |
</ROLE_ID> |
|
| 130 |
<plantConcept_ID> |
|
| 131 |
<plantConcept> |
|
| 132 |
<plantStatus> |
|
| 133 |
<plantLevel>Genus</plantLevel> |
|
| 134 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 135 |
<startDate>epoch</startDate> |
|
| 136 |
<party_ID> |
|
| 137 |
<party/> |
|
| 138 |
</party_ID> |
|
| 139 |
</plantStatus> |
|
| 140 |
<reference_ID> |
|
| 141 |
<reference/> |
|
| 142 |
</reference_ID> |
|
| 143 |
<plantName_ID> |
|
| 144 |
<plantName> |
|
| 145 |
<plantName>Inga</plantName> |
|
| 146 |
</plantName> |
|
| 147 |
</plantName_ID> |
|
| 148 |
</plantConcept> |
|
| 149 |
</plantConcept_ID> |
|
| 150 |
<interpretationType>Computer (automated)</interpretationType> |
|
| 151 |
<originalInterpretation>false</originalInterpretation> |
|
| 152 |
<currentInterpretation>true</currentInterpretation> |
|
| 153 |
<interpretationDate>epoch</interpretationDate> |
|
| 154 |
<party_ID> |
|
| 155 |
<party/> |
|
| 156 |
</party_ID> |
|
| 157 |
</taxonInterpretation> |
|
| 158 |
<taxonInterpretation> |
|
| 159 |
<ROLE_ID> |
|
| 160 |
<aux_Role> |
|
| 161 |
<roleCode>computer</roleCode> |
|
| 162 |
</aux_Role> |
|
| 163 |
</ROLE_ID> |
|
| 164 |
<plantConcept_ID> |
|
| 165 |
<plantConcept> |
|
| 166 |
<plantStatus> |
|
| 167 |
<plantLevel>Species</plantLevel> |
|
| 168 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 169 |
<startDate>epoch</startDate> |
|
| 170 |
<party_ID> |
|
| 171 |
<party/> |
|
| 172 |
</party_ID> |
|
| 173 |
</plantStatus> |
|
| 174 |
<reference_ID> |
|
| 175 |
<reference/> |
|
| 176 |
</reference_ID> |
|
| 177 |
<plantName_ID> |
|
| 178 |
<plantName> |
|
| 179 |
<plantName>indet</plantName> |
|
| 180 |
</plantName> |
|
| 181 |
</plantName_ID> |
|
| 182 |
</plantConcept> |
|
| 183 |
</plantConcept_ID> |
|
| 184 |
<interpretationType>Computer (automated)</interpretationType> |
|
| 185 |
<originalInterpretation>false</originalInterpretation> |
|
| 186 |
<currentInterpretation>true</currentInterpretation> |
|
| 187 |
<interpretationDate>epoch</interpretationDate> |
|
| 188 |
<party_ID> |
|
| 189 |
<party/> |
|
| 190 |
</party_ID> |
|
| 191 |
</taxonInterpretation> |
|
| 192 |
<taxonInterpretation> |
|
| 193 |
<ROLE_ID> |
|
| 194 |
<aux_Role> |
|
| 195 |
<roleCode>identifier</roleCode> |
|
| 196 |
</aux_Role> |
|
| 197 |
</ROLE_ID> |
|
| 198 |
<plantConcept_ID> |
|
| 199 |
<plantConcept> |
|
| 200 |
<plantStatus> |
|
| 201 |
<plantLevel>Family</plantLevel> |
|
| 202 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 203 |
<startDate>epoch</startDate> |
|
| 204 |
<party_ID> |
|
| 205 |
<party/> |
|
| 206 |
</party_ID> |
|
| 207 |
</plantStatus> |
|
| 208 |
<reference_ID> |
|
| 209 |
<reference/> |
|
| 210 |
</reference_ID> |
|
| 211 |
<plantName_ID> |
|
| 212 |
<plantName> |
|
| 213 |
<plantName>Fabaceae</plantName> |
|
| 214 |
</plantName> |
|
| 215 |
</plantName_ID> |
|
| 216 |
</plantConcept> |
|
| 217 |
</plantConcept_ID> |
|
| 218 |
<interpretationType>Author</interpretationType> |
|
| 219 |
<originalInterpretation>true</originalInterpretation> |
|
| 220 |
<currentInterpretation>true</currentInterpretation> |
|
| 221 |
<interpretationDate>epoch</interpretationDate> |
|
| 222 |
<party_ID> |
|
| 223 |
<party/> |
|
| 224 |
</party_ID> |
|
| 225 |
</taxonInterpretation> |
|
| 226 |
<taxonInterpretation> |
|
| 227 |
<ROLE_ID> |
|
| 228 |
<aux_Role> |
|
| 229 |
<roleCode>identifier</roleCode> |
|
| 230 |
</aux_Role> |
|
| 231 |
</ROLE_ID> |
|
| 232 |
<plantConcept_ID> |
|
| 233 |
<plantConcept> |
|
| 234 |
<plantStatus> |
|
| 235 |
<plantLevel>Species</plantLevel> |
|
| 236 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 237 |
<startDate>epoch</startDate> |
|
| 238 |
<party_ID> |
|
| 239 |
<party/> |
|
| 240 |
</party_ID> |
|
| 241 |
</plantStatus> |
|
| 242 |
<reference_ID> |
|
| 243 |
<reference/> |
|
| 244 |
</reference_ID> |
|
| 245 |
<plantName_ID> |
|
| 246 |
<plantName> |
|
| 247 |
<plantName>Inga indet</plantName> |
|
| 248 |
</plantName> |
|
| 249 |
</plantName_ID> |
|
| 250 |
</plantConcept> |
|
| 251 |
</plantConcept_ID> |
|
| 252 |
<interpretationType>Author</interpretationType> |
|
| 253 |
<originalInterpretation>true</originalInterpretation> |
|
| 254 |
<currentInterpretation>true</currentInterpretation> |
|
| 255 |
<interpretationDate>epoch</interpretationDate> |
|
| 256 |
<party_ID> |
|
| 257 |
<party/> |
|
| 258 |
</party_ID> |
|
| 259 |
</taxonInterpretation> |
|
| 260 |
</stemLocation> |
|
| 261 |
<stemCount>1</stemCount> |
|
| 262 |
<stemDiameter>662</stemDiameter> |
|
| 263 |
</stemCount> |
|
| 264 |
</taxonImportance> |
|
| 265 |
</taxonObservation> |
|
| 266 |
<taxonObservation id="1"> |
|
| 267 |
<observation_ID> |
|
| 268 |
<observation> |
|
| 269 |
<plot_ID> |
|
| 270 |
<plot> |
|
| 271 |
<confidentialityStatus>0</confidentialityStatus> |
|
| 272 |
<authorPlotCode>4</authorPlotCode> |
|
| 273 |
<PARENT_ID> |
|
| 274 |
<plot> |
|
| 275 |
<confidentialityStatus>0</confidentialityStatus> |
|
| 276 |
<authorPlotCode>ALP-11</authorPlotCode> |
|
| 277 |
</plot> |
|
| 278 |
</PARENT_ID> |
|
| 279 |
</plot> |
|
| 280 |
</plot_ID> |
|
| 281 |
<obsStartDate>2001-01-01</obsStartDate> |
|
| 282 |
<authorObsCode>4</authorObsCode> |
|
| 283 |
</observation> |
|
| 284 |
</observation_ID> |
|
| 285 |
<taxonImportance> |
|
| 286 |
<stemCount> |
|
| 287 |
<stemLocation> |
|
| 288 |
<taxonInterpretation> |
|
| 289 |
<ROLE_ID> |
|
| 290 |
<aux_Role> |
|
| 291 |
<roleCode>collector</roleCode> |
|
| 292 |
</aux_Role> |
|
| 293 |
</ROLE_ID> |
|
| 294 |
<interpretationType>Author</interpretationType> |
|
| 295 |
<originalInterpretation>true</originalInterpretation> |
|
| 296 |
<currentInterpretation>false</currentInterpretation> |
|
| 297 |
<interpretationDate>epoch</interpretationDate> |
|
| 298 |
<plantConcept_ID> |
|
| 299 |
<plantConcept> |
|
| 300 |
<reference_ID> |
|
| 301 |
<reference/> |
|
| 302 |
</reference_ID> |
|
| 303 |
<plantName_ID> |
|
| 304 |
<plantName> |
|
| 305 |
<plantName>Virola pavonis</plantName> |
|
| 306 |
</plantName> |
|
| 307 |
</plantName_ID> |
|
| 308 |
</plantConcept> |
|
| 309 |
</plantConcept_ID> |
|
| 310 |
<party_ID> |
|
| 311 |
<party/> |
|
| 312 |
</party_ID> |
|
| 313 |
<museumAccessionNumber>607722</museumAccessionNumber> |
|
| 314 |
<definedValue fkey="tableRecord_ID"> |
|
| 315 |
<userDefined_ID> |
|
| 316 |
<userDefined> |
|
| 317 |
<tableName>taxonInterpretation</tableName> |
|
| 318 |
<userDefinedName>censusNo</userDefinedName> |
|
| 319 |
<userDefinedType>varchar</userDefinedType> |
|
| 320 |
</userDefined> |
|
| 321 |
</userDefined_ID> |
|
| 322 |
<definedValue>1</definedValue> |
|
| 323 |
</definedValue> |
|
| 324 |
<definedValue fkey="tableRecord_ID"> |
|
| 325 |
<userDefined_ID> |
|
| 326 |
<userDefined> |
|
| 327 |
<tableName>taxonInterpretation</tableName> |
|
| 328 |
<userDefinedName>individualCode</userDefinedName> |
|
| 329 |
<userDefinedType>varchar</userDefinedType> |
|
| 330 |
</userDefined> |
|
| 331 |
</userDefined_ID> |
|
| 332 |
<definedValue>100</definedValue> |
|
| 333 |
</definedValue> |
|
| 334 |
<collectionNumber>14669</collectionNumber> |
|
| 335 |
<collector_ID> |
|
| 336 |
<party> |
|
| 337 |
<surName>Vasquez</surName> |
|
| 338 |
</party> |
|
| 339 |
</collector_ID> |
|
| 340 |
<definedValue fkey="tableRecord_ID"> |
|
| 341 |
<userDefined_ID> |
|
| 342 |
<userDefined> |
|
| 343 |
<tableName>taxonInterpretation</tableName> |
|
| 344 |
<userDefinedName>habit</userDefinedName> |
|
| 345 |
<userDefinedType>varchar</userDefinedType> |
|
| 346 |
</userDefined> |
|
| 347 |
</userDefined_ID> |
|
| 348 |
<definedValue>T</definedValue> |
|
| 349 |
</definedValue> |
|
| 350 |
</taxonInterpretation> |
|
| 351 |
<stemCode>84</stemCode> |
|
| 352 |
<stemCode>91</stemCode> |
|
| 353 |
<taxonInterpretation> |
|
| 354 |
<ROLE_ID> |
|
| 355 |
<aux_Role> |
|
| 356 |
<roleCode>computer</roleCode> |
|
| 357 |
</aux_Role> |
|
| 358 |
</ROLE_ID> |
|
| 359 |
<plantConcept_ID> |
|
| 360 |
<plantConcept> |
|
| 361 |
<plantStatus> |
|
| 362 |
<plantLevel>Family</plantLevel> |
|
| 363 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 364 |
<startDate>epoch</startDate> |
|
| 365 |
<party_ID> |
|
| 366 |
<party/> |
|
| 367 |
</party_ID> |
|
| 368 |
</plantStatus> |
|
| 369 |
<reference_ID> |
|
| 370 |
<reference/> |
|
| 371 |
</reference_ID> |
|
| 372 |
<plantName_ID> |
|
| 373 |
<plantName> |
|
| 374 |
<plantName>Myristicaceae</plantName> |
|
| 375 |
</plantName> |
|
| 376 |
</plantName_ID> |
|
| 377 |
</plantConcept> |
|
| 378 |
</plantConcept_ID> |
|
| 379 |
<interpretationType>Computer (automated)</interpretationType> |
|
| 380 |
<originalInterpretation>false</originalInterpretation> |
|
| 381 |
<currentInterpretation>true</currentInterpretation> |
|
| 382 |
<interpretationDate>epoch</interpretationDate> |
|
| 383 |
<party_ID> |
|
| 384 |
<party/> |
|
| 385 |
</party_ID> |
|
| 386 |
</taxonInterpretation> |
|
| 387 |
<taxonInterpretation> |
|
| 388 |
<ROLE_ID> |
|
| 389 |
<aux_Role> |
|
| 390 |
<roleCode>computer</roleCode> |
|
| 391 |
</aux_Role> |
|
| 392 |
</ROLE_ID> |
|
| 393 |
<plantConcept_ID> |
|
| 394 |
<plantConcept> |
|
| 395 |
<plantStatus> |
|
| 396 |
<plantLevel>Genus</plantLevel> |
|
| 397 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 398 |
<startDate>epoch</startDate> |
|
| 399 |
<party_ID> |
|
| 400 |
<party/> |
|
| 401 |
</party_ID> |
|
| 402 |
</plantStatus> |
|
| 403 |
<reference_ID> |
|
| 404 |
<reference/> |
|
| 405 |
</reference_ID> |
|
| 406 |
<plantName_ID> |
|
| 407 |
<plantName> |
|
| 408 |
<plantName>Virola</plantName> |
|
| 409 |
</plantName> |
|
| 410 |
</plantName_ID> |
|
| 411 |
</plantConcept> |
|
| 412 |
</plantConcept_ID> |
|
| 413 |
<interpretationType>Computer (automated)</interpretationType> |
|
| 414 |
<originalInterpretation>false</originalInterpretation> |
|
| 415 |
<currentInterpretation>true</currentInterpretation> |
|
| 416 |
<interpretationDate>epoch</interpretationDate> |
|
| 417 |
<party_ID> |
|
| 418 |
<party/> |
|
| 419 |
</party_ID> |
|
| 420 |
</taxonInterpretation> |
|
| 421 |
<taxonInterpretation> |
|
| 422 |
<ROLE_ID> |
|
| 423 |
<aux_Role> |
|
| 424 |
<roleCode>computer</roleCode> |
|
| 425 |
</aux_Role> |
|
| 426 |
</ROLE_ID> |
|
| 427 |
<plantConcept_ID> |
|
| 428 |
<plantConcept> |
|
| 429 |
<plantStatus> |
|
| 430 |
<plantLevel>Species</plantLevel> |
|
| 431 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 432 |
<startDate>epoch</startDate> |
|
| 433 |
<party_ID> |
|
| 434 |
<party/> |
|
| 435 |
</party_ID> |
|
| 436 |
</plantStatus> |
|
| 437 |
<reference_ID> |
|
| 438 |
<reference/> |
|
| 439 |
</reference_ID> |
|
| 440 |
<plantName_ID> |
|
| 441 |
<plantName> |
|
| 442 |
<plantName>pavonis</plantName> |
|
| 443 |
</plantName> |
|
| 444 |
</plantName_ID> |
|
| 445 |
</plantConcept> |
|
| 446 |
</plantConcept_ID> |
|
| 447 |
<interpretationType>Computer (automated)</interpretationType> |
|
| 448 |
<originalInterpretation>false</originalInterpretation> |
|
| 449 |
<currentInterpretation>true</currentInterpretation> |
|
| 450 |
<interpretationDate>epoch</interpretationDate> |
|
| 451 |
<party_ID> |
|
| 452 |
<party/> |
|
| 453 |
</party_ID> |
|
| 454 |
</taxonInterpretation> |
|
| 455 |
<taxonInterpretation> |
|
| 456 |
<ROLE_ID> |
|
| 457 |
<aux_Role> |
|
| 458 |
<roleCode>identifier</roleCode> |
|
| 459 |
</aux_Role> |
|
| 460 |
</ROLE_ID> |
|
| 461 |
<plantConcept_ID> |
|
| 462 |
<plantConcept> |
|
| 463 |
<plantStatus> |
|
| 464 |
<plantLevel>Family</plantLevel> |
|
| 465 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 466 |
<startDate>epoch</startDate> |
|
| 467 |
<party_ID> |
|
| 468 |
<party/> |
|
| 469 |
</party_ID> |
|
| 470 |
</plantStatus> |
|
| 471 |
<reference_ID> |
|
| 472 |
<reference/> |
|
| 473 |
</reference_ID> |
|
| 474 |
<plantName_ID> |
|
| 475 |
<plantName> |
|
| 476 |
<plantName>Myristicaceae</plantName> |
|
| 477 |
</plantName> |
|
| 478 |
</plantName_ID> |
|
| 479 |
</plantConcept> |
|
| 480 |
</plantConcept_ID> |
|
| 481 |
<interpretationType>Author</interpretationType> |
|
| 482 |
<originalInterpretation>true</originalInterpretation> |
|
| 483 |
<currentInterpretation>true</currentInterpretation> |
|
| 484 |
<interpretationDate>epoch</interpretationDate> |
|
| 485 |
<party_ID> |
|
| 486 |
<party/> |
|
| 487 |
</party_ID> |
|
| 488 |
</taxonInterpretation> |
|
| 489 |
<taxonInterpretation> |
|
| 490 |
<ROLE_ID> |
|
| 491 |
<aux_Role> |
|
| 492 |
<roleCode>identifier</roleCode> |
|
| 493 |
</aux_Role> |
|
| 494 |
</ROLE_ID> |
|
| 495 |
<plantConcept_ID> |
|
| 496 |
<plantConcept> |
|
| 497 |
<plantStatus> |
|
| 498 |
<plantLevel>Species</plantLevel> |
|
| 499 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 500 |
<startDate>epoch</startDate> |
|
| 501 |
<party_ID> |
|
| 502 |
<party/> |
|
| 503 |
</party_ID> |
|
| 504 |
</plantStatus> |
|
| 505 |
<reference_ID> |
|
| 506 |
<reference/> |
|
| 507 |
</reference_ID> |
|
| 508 |
<plantName_ID> |
|
| 509 |
<plantName> |
|
| 510 |
<plantName>Virola pavonis</plantName> |
|
| 511 |
</plantName> |
|
| 512 |
</plantName_ID> |
|
| 513 |
</plantConcept> |
|
| 514 |
</plantConcept_ID> |
|
| 515 |
<interpretationType>Author</interpretationType> |
|
| 516 |
<originalInterpretation>true</originalInterpretation> |
|
| 517 |
<currentInterpretation>true</currentInterpretation> |
|
| 518 |
<interpretationDate>epoch</interpretationDate> |
|
| 519 |
<party_ID> |
|
| 520 |
<party/> |
|
| 521 |
</party_ID> |
|
| 522 |
</taxonInterpretation> |
|
| 523 |
</stemLocation> |
|
| 524 |
<stemCount>1</stemCount> |
|
| 525 |
<stemDiameter>215</stemDiameter> |
|
| 526 |
</stemCount> |
|
| 527 |
</taxonImportance> |
|
| 528 |
</taxonObservation> |
|
| 529 |
</VegBank> |
|
| scripts/test/accepted_output/NYBG.organisms.CSV.VegX.xml | ||
|---|---|---|
| 1 |
<?xml version="1.0" ?> |
|
| 2 |
<VegX> |
|
| 3 |
<individualOrganismObservations> |
|
| 4 |
<individualOrganismObservation id="0"> |
|
| 5 |
<simpleUserdefined> |
|
| 6 |
<name>count</name> |
|
| 7 |
<value>1</value> |
|
| 8 |
</simpleUserdefined> |
|
| 9 |
<individualOrganismID>0</individualOrganismID> |
|
| 10 |
<plotObservationID>0</plotObservationID> |
|
| 11 |
<simpleUserdefined> |
|
| 12 |
<name>habitat</name> |
|
| 13 |
<value>Floodplain forest</value> |
|
| 14 |
</simpleUserdefined> |
|
| 15 |
<simpleUserdefined> |
|
| 16 |
<name>plantFungusDescription</name> |
|
| 17 |
<value>with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</value> |
|
| 18 |
</simpleUserdefined> |
|
| 19 |
</individualOrganismObservation> |
|
| 20 |
<individualOrganismObservation id="1"> |
|
| 21 |
<simpleUserdefined> |
|
| 22 |
<name>count</name> |
|
| 23 |
<value>1</value> |
|
| 24 |
</simpleUserdefined> |
|
| 25 |
<individualOrganismID>1</individualOrganismID> |
|
| 26 |
<plotObservationID>1</plotObservationID> |
|
| 27 |
</individualOrganismObservation> |
|
| 28 |
</individualOrganismObservations> |
|
| 29 |
<individualOrganisms> |
|
| 30 |
<individualOrganism id="0"> |
|
| 31 |
<taxonNameUsageConceptsID>0</taxonNameUsageConceptsID> |
|
| 32 |
</individualOrganism> |
|
| 33 |
<individualOrganism id="1"> |
|
| 34 |
<taxonNameUsageConceptsID>1</taxonNameUsageConceptsID> |
|
| 35 |
</individualOrganism> |
|
| 36 |
</individualOrganisms> |
|
| 37 |
<taxonNameUsageConcepts> |
|
| 38 |
<taxonNameUsageConcept id="0"> |
|
| 39 |
<partyWithRole> |
|
| 40 |
<partyID>0</partyID> |
|
| 41 |
</partyWithRole> |
|
| 42 |
<authorCode>9877</authorCode> |
|
| 43 |
<voucher>816590</voucher> |
|
| 44 |
</taxonNameUsageConcept> |
|
| 45 |
<taxonNameUsageConcept id="1"> |
|
| 46 |
<partyWithRole> |
|
| 47 |
<partyID>2</partyID> |
|
| 48 |
</partyWithRole> |
|
| 49 |
<authorCode>545</authorCode> |
|
| 50 |
<voucher>220541</voucher> |
|
| 51 |
</taxonNameUsageConcept> |
|
| 52 |
</taxonNameUsageConcepts> |
|
| 53 |
<parties> |
|
| 54 |
<party id="0"> |
|
| 55 |
<organizationName>NY Herbarium</organizationName> |
|
| 56 |
</party> |
|
| 57 |
<party id="1"> |
|
| 58 |
<individualName> |
|
| 59 |
<surName>Foster</surName> |
|
| 60 |
<givenName>R. B.</givenName> |
|
| 61 |
</individualName> |
|
| 62 |
</party> |
|
| 63 |
<party id="2"> |
|
| 64 |
<organizationName>NY Herbarium</organizationName> |
|
| 65 |
</party> |
|
| 66 |
<party id="3"> |
|
| 67 |
<individualName> |
|
| 68 |
<surName>Walker</surName> |
|
| 69 |
<givenName>J. B.</givenName> |
|
| 70 |
</individualName> |
|
| 71 |
</party> |
|
| 72 |
</parties> |
|
| 73 |
<taxonDeterminations> |
|
| 74 |
<taxonDetermination> |
|
| 75 |
<taxonNameUsageConceptID>0</taxonNameUsageConceptID> |
|
| 76 |
<partyWithRole> |
|
| 77 |
<role>identifier</role> |
|
| 78 |
</partyWithRole> |
|
| 79 |
<taxonRelationshipAssertions> |
|
| 80 |
<taxonRelationshipAssertion> |
|
| 81 |
<assertion> |
|
| 82 |
<taxonNameID>0</taxonNameID> |
|
| 83 |
</assertion> |
|
| 84 |
</taxonRelationshipAssertion> |
|
| 85 |
<taxonRelationshipAssertion> |
|
| 86 |
<assertion> |
|
| 87 |
<taxonConceptID>0</taxonConceptID> |
|
| 88 |
</assertion> |
|
| 89 |
</taxonRelationshipAssertion> |
|
| 90 |
<taxonRelationshipAssertion> |
|
| 91 |
<assertion> |
|
| 92 |
<taxonConceptID>1</taxonConceptID> |
|
| 93 |
</assertion> |
|
| 94 |
</taxonRelationshipAssertion> |
|
| 95 |
<taxonRelationshipAssertion> |
|
| 96 |
<assertion> |
|
| 97 |
<taxonConceptID>2</taxonConceptID> |
|
| 98 |
</assertion> |
|
| 99 |
</taxonRelationshipAssertion> |
|
| 100 |
<taxonRelationshipAssertion> |
|
| 101 |
<assertion> |
|
| 102 |
<taxonConceptID>3</taxonConceptID> |
|
| 103 |
</assertion> |
|
| 104 |
</taxonRelationshipAssertion> |
|
| 105 |
<taxonRelationshipAssertion> |
|
| 106 |
<assertion> |
|
| 107 |
<taxonConceptID>4</taxonConceptID> |
|
| 108 |
</assertion> |
|
| 109 |
</taxonRelationshipAssertion> |
|
| 110 |
</taxonRelationshipAssertions> |
|
| 111 |
</taxonDetermination> |
|
| 112 |
<taxonDetermination> |
|
| 113 |
<taxonNameUsageConceptID>0</taxonNameUsageConceptID> |
|
| 114 |
<partyWithRole> |
|
| 115 |
<role>collector</role> |
|
| 116 |
<partyID>1</partyID> |
|
| 117 |
</partyWithRole> |
|
| 118 |
</taxonDetermination> |
|
| 119 |
<taxonDetermination> |
|
| 120 |
<taxonNameUsageConceptID>1</taxonNameUsageConceptID> |
|
| 121 |
<partyWithRole> |
|
| 122 |
<role>identifier</role> |
|
| 123 |
</partyWithRole> |
|
| 124 |
<taxonRelationshipAssertions> |
|
| 125 |
<taxonRelationshipAssertion> |
|
| 126 |
<assertion> |
|
| 127 |
<taxonNameID>1</taxonNameID> |
|
| 128 |
</assertion> |
|
| 129 |
</taxonRelationshipAssertion> |
|
| 130 |
<taxonRelationshipAssertion> |
|
| 131 |
<assertion> |
|
| 132 |
<taxonConceptID>5</taxonConceptID> |
|
| 133 |
</assertion> |
|
| 134 |
</taxonRelationshipAssertion> |
|
| 135 |
<taxonRelationshipAssertion> |
|
| 136 |
<assertion> |
|
| 137 |
<taxonConceptID>6</taxonConceptID> |
|
| 138 |
</assertion> |
|
| 139 |
</taxonRelationshipAssertion> |
|
| 140 |
<taxonRelationshipAssertion> |
|
| 141 |
<assertion> |
|
| 142 |
<taxonConceptID>7</taxonConceptID> |
|
| 143 |
</assertion> |
|
| 144 |
</taxonRelationshipAssertion> |
|
| 145 |
</taxonRelationshipAssertions> |
|
| 146 |
</taxonDetermination> |
|
| 147 |
<taxonDetermination> |
|
| 148 |
<taxonNameUsageConceptID>1</taxonNameUsageConceptID> |
|
| 149 |
<partyWithRole> |
|
| 150 |
<role>collector</role> |
|
| 151 |
<partyID>3</partyID> |
|
| 152 |
</partyWithRole> |
|
| 153 |
</taxonDetermination> |
|
| 154 |
</taxonDeterminations> |
|
| 155 |
<taxonNames> |
|
| 156 |
<taxonName id="0"> |
|
| 157 |
<Simple>Cariniana estrellensis (Raddi) Kuntze</Simple> |
|
| 158 |
</taxonName> |
|
| 159 |
<taxonName id="1"> |
|
| 160 |
<Simple>Scrophulariaceae</Simple> |
|
| 161 |
</taxonName> |
|
| 162 |
</taxonNames> |
|
| 163 |
<taxonConcepts> |
|
| 164 |
<taxonConcept id="0"> |
|
| 165 |
<Rank code="reg"/> |
|
| 166 |
<Name>Plantae</Name> |
|
| 167 |
</taxonConcept> |
|
| 168 |
<taxonConcept id="1"> |
|
| 169 |
<Rank code="phyl_div"/> |
|
| 170 |
<Name>Magnoliophyta (flowering plants)</Name> |
|
| 171 |
</taxonConcept> |
|
| 172 |
<taxonConcept id="2"> |
|
| 173 |
<Rank code="fam"/> |
|
| 174 |
<Name>Lecythidaceae</Name> |
|
| 175 |
</taxonConcept> |
|
| 176 |
<taxonConcept id="3"> |
|
| 177 |
<Rank code="gen"/> |
|
| 178 |
<Name>Cariniana</Name> |
|
| 179 |
</taxonConcept> |
|
| 180 |
<taxonConcept id="4"> |
|
| 181 |
<Rank code="sp"/> |
|
| 182 |
<Name>estrellensis</Name> |
|
| 183 |
<AccordingTo> |
|
| 184 |
<Simple>(Raddi) Kuntze</Simple> |
|
| 185 |
</AccordingTo> |
|
| 186 |
</taxonConcept> |
|
| 187 |
<taxonConcept id="5"> |
|
| 188 |
<Rank code="reg"/> |
|
| 189 |
<Name>Plantae</Name> |
|
| 190 |
</taxonConcept> |
|
| 191 |
<taxonConcept id="6"> |
|
| 192 |
<Rank code="phyl_div"/> |
|
| 193 |
<Name>Magnoliophyta (flowering plants)</Name> |
|
| 194 |
</taxonConcept> |
|
| 195 |
<taxonConcept id="7"> |
|
| 196 |
<Rank code="fam"/> |
|
| 197 |
<Name>Scrophulariaceae</Name> |
|
| 198 |
</taxonConcept> |
|
| 199 |
</taxonConcepts> |
|
| 200 |
<plotObservations> |
|
| 201 |
<plotObservation id="0"> |
|
| 202 |
<obsStartDate>1984-08-20</obsStartDate> |
|
| 203 |
<plotUniqueIdentifierID>0</plotUniqueIdentifierID> |
|
| 204 |
</plotObservation> |
|
| 205 |
<plotObservation id="1"> |
|
| 206 |
<obsStartDate>1994-01-17</obsStartDate> |
|
| 207 |
<plotUniqueIdentifierID>1</plotUniqueIdentifierID> |
|
| 208 |
</plotObservation> |
|
| 209 |
</plotObservations> |
|
| 210 |
<plots> |
|
| 211 |
<plot id="0"> |
|
| 212 |
<country>Peru</country> |
|
| 213 |
<state>Madre de Dios</state> |
|
| 214 |
<county>Manú</county> |
|
| 215 |
<simpleUserdefined> |
|
| 216 |
<name>locality</name> |
|
| 217 |
<value>Parque Nacional del Manu. Río Manu: Cocha Casha Station</value> |
|
| 218 |
</simpleUserdefined> |
|
| 219 |
<geospatial> |
|
| 220 |
<DecimalLongitude>-71.40</DecimalLongitude> |
|
| 221 |
<DecimalLatitude>-11.80</DecimalLatitude> |
|
| 222 |
<minimumElevationInMeters>350</minimumElevationInMeters> |
|
| 223 |
<maximumElevationInMeters>350</maximumElevationInMeters> |
|
| 224 |
</geospatial> |
|
| 225 |
</plot> |
|
| 226 |
<plot id="1"> |
|
| 227 |
<country>Belize</country> |
|
| 228 |
<state>Belize District</state> |
|
| 229 |
<simpleUserdefined> |
|
| 230 |
<name>locality</name> |
|
| 231 |
<value>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</value> |
|
| 232 |
</simpleUserdefined> |
|
| 233 |
<geospatial> |
|
| 234 |
<DecimalLongitude>-88.50</DecimalLongitude> |
|
| 235 |
<DecimalLatitude>17.40</DecimalLatitude> |
|
| 236 |
<minimumElevationInMeters>15</minimumElevationInMeters> |
|
| 237 |
<maximumElevationInMeters>15</maximumElevationInMeters> |
|
| 238 |
</geospatial> |
|
| 239 |
</plot> |
|
| 240 |
</plots> |
|
| 241 |
</VegX> |
|
| scripts/test/accepted_output/NYBG.organisms.CSV.VegBank.xml | ||
|---|---|---|
| 1 |
<?xml version="1.0" ?> |
|
| 2 |
<VegBank> |
|
| 3 |
<taxonObservation id="0"> |
|
| 4 |
<taxonImportance> |
|
| 5 |
<stemCount> |
|
| 6 |
<stemCount>1</stemCount> |
|
| 7 |
<stemLocation> |
|
| 8 |
<taxonInterpretation> |
|
| 9 |
<ROLE_ID> |
|
| 10 |
<aux_Role> |
|
| 11 |
<roleCode>collector</roleCode> |
|
| 12 |
</aux_Role> |
|
| 13 |
</ROLE_ID> |
|
| 14 |
<museum_ID> |
|
| 15 |
<party> |
|
| 16 |
<OrganizationName>NY Herbarium</OrganizationName> |
|
| 17 |
</party> |
|
| 18 |
</museum_ID> |
|
| 19 |
<plantConcept_ID> |
|
| 20 |
<plantConcept> |
|
| 21 |
<reference_ID> |
|
| 22 |
<reference/> |
|
| 23 |
</reference_ID> |
|
| 24 |
<plantName_ID> |
|
| 25 |
<plantName> |
|
| 26 |
<plantName>Cariniana estrellensis (Raddi) Kuntze</plantName> |
|
| 27 |
</plantName> |
|
| 28 |
</plantName_ID> |
|
| 29 |
</plantConcept> |
|
| 30 |
</plantConcept_ID> |
|
| 31 |
<collectionNumber>9877</collectionNumber> |
|
| 32 |
<collector_ID> |
|
| 33 |
<party> |
|
| 34 |
<middleName>B.</middleName> |
|
| 35 |
<surName>Foster</surName> |
|
| 36 |
<givenName>R.</givenName> |
|
| 37 |
</party> |
|
| 38 |
</collector_ID> |
|
| 39 |
<interpretationType>Author</interpretationType> |
|
| 40 |
<originalInterpretation>true</originalInterpretation> |
|
| 41 |
<currentInterpretation>false</currentInterpretation> |
|
| 42 |
<interpretationDate>epoch</interpretationDate> |
|
| 43 |
<party_ID> |
|
| 44 |
<party/> |
|
| 45 |
</party_ID> |
|
| 46 |
<museumAccessionNumber>816590</museumAccessionNumber> |
|
| 47 |
</taxonInterpretation> |
|
| 48 |
<taxonInterpretation> |
|
| 49 |
<ROLE_ID> |
|
| 50 |
<aux_Role> |
|
| 51 |
<roleCode>identifier</roleCode> |
|
| 52 |
</aux_Role> |
|
| 53 |
</ROLE_ID> |
|
| 54 |
<interpretationType>Author</interpretationType> |
|
| 55 |
<originalInterpretation>true</originalInterpretation> |
|
| 56 |
<currentInterpretation>true</currentInterpretation> |
|
| 57 |
<interpretationDate>epoch</interpretationDate> |
|
| 58 |
<party_ID> |
|
| 59 |
<party/> |
|
| 60 |
</party_ID> |
|
| 61 |
<plantConcept_ID> |
|
| 62 |
<plantConcept> |
|
| 63 |
<reference_ID> |
|
| 64 |
<reference/> |
|
| 65 |
</reference_ID> |
|
| 66 |
<plantName_ID> |
|
| 67 |
<plantName> |
|
| 68 |
<plantName>Cariniana estrellensis (Raddi) Kuntze</plantName> |
|
| 69 |
</plantName> |
|
| 70 |
</plantName_ID> |
|
| 71 |
</plantConcept> |
|
| 72 |
</plantConcept_ID> |
|
| 73 |
</taxonInterpretation> |
|
| 74 |
<taxonInterpretation> |
|
| 75 |
<ROLE_ID> |
|
| 76 |
<aux_Role> |
|
| 77 |
<roleCode>identifier</roleCode> |
|
| 78 |
</aux_Role> |
|
| 79 |
</ROLE_ID> |
|
| 80 |
<plantConcept_ID> |
|
| 81 |
<plantConcept> |
|
| 82 |
<plantStatus> |
|
| 83 |
<plantLevel>Kingdom</plantLevel> |
|
| 84 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 85 |
<startDate>epoch</startDate> |
|
| 86 |
<party_ID> |
|
| 87 |
<party/> |
|
| 88 |
</party_ID> |
|
| 89 |
</plantStatus> |
|
| 90 |
<reference_ID> |
|
| 91 |
<reference/> |
|
| 92 |
</reference_ID> |
|
| 93 |
<plantName_ID> |
|
| 94 |
<plantName> |
|
| 95 |
<plantName>Plantae</plantName> |
|
| 96 |
</plantName> |
|
| 97 |
</plantName_ID> |
|
| 98 |
</plantConcept> |
|
| 99 |
</plantConcept_ID> |
|
| 100 |
<interpretationType>Author</interpretationType> |
|
| 101 |
<originalInterpretation>true</originalInterpretation> |
|
| 102 |
<currentInterpretation>true</currentInterpretation> |
|
| 103 |
<interpretationDate>epoch</interpretationDate> |
|
| 104 |
<party_ID> |
|
| 105 |
<party/> |
|
| 106 |
</party_ID> |
|
| 107 |
</taxonInterpretation> |
|
| 108 |
<taxonInterpretation> |
|
| 109 |
<ROLE_ID> |
|
| 110 |
<aux_Role> |
|
| 111 |
<roleCode>identifier</roleCode> |
|
| 112 |
</aux_Role> |
|
| 113 |
</ROLE_ID> |
|
| 114 |
<plantConcept_ID> |
|
| 115 |
<plantConcept> |
|
| 116 |
<plantStatus> |
|
| 117 |
<plantLevel>Subkingdom</plantLevel> |
|
| 118 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 119 |
<startDate>epoch</startDate> |
|
| 120 |
<party_ID> |
|
| 121 |
<party/> |
|
| 122 |
</party_ID> |
|
| 123 |
</plantStatus> |
|
| 124 |
<reference_ID> |
|
| 125 |
<reference/> |
|
| 126 |
</reference_ID> |
|
| 127 |
<plantName_ID> |
|
| 128 |
<plantName> |
|
| 129 |
<plantName>Magnoliophyta (flowering plants)</plantName> |
|
| 130 |
</plantName> |
|
| 131 |
</plantName_ID> |
|
| 132 |
</plantConcept> |
|
| 133 |
</plantConcept_ID> |
|
| 134 |
<interpretationType>Author</interpretationType> |
|
| 135 |
<originalInterpretation>true</originalInterpretation> |
|
| 136 |
<currentInterpretation>true</currentInterpretation> |
|
| 137 |
<interpretationDate>epoch</interpretationDate> |
|
| 138 |
<party_ID> |
|
| 139 |
<party/> |
|
| 140 |
</party_ID> |
|
| 141 |
</taxonInterpretation> |
|
| 142 |
<taxonInterpretation> |
|
| 143 |
<ROLE_ID> |
|
| 144 |
<aux_Role> |
|
| 145 |
<roleCode>identifier</roleCode> |
|
| 146 |
</aux_Role> |
|
| 147 |
</ROLE_ID> |
|
| 148 |
<plantConcept_ID> |
|
| 149 |
<plantConcept> |
|
| 150 |
<plantStatus> |
|
| 151 |
<plantLevel>Family</plantLevel> |
|
| 152 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 153 |
<startDate>epoch</startDate> |
|
| 154 |
<party_ID> |
|
| 155 |
<party/> |
|
| 156 |
</party_ID> |
|
| 157 |
</plantStatus> |
|
| 158 |
<reference_ID> |
|
| 159 |
<reference/> |
|
| 160 |
</reference_ID> |
|
| 161 |
<plantName_ID> |
|
| 162 |
<plantName> |
|
| 163 |
<plantName>Lecythidaceae</plantName> |
|
| 164 |
</plantName> |
|
| 165 |
</plantName_ID> |
|
| 166 |
</plantConcept> |
|
| 167 |
</plantConcept_ID> |
|
| 168 |
<interpretationType>Author</interpretationType> |
|
| 169 |
<originalInterpretation>true</originalInterpretation> |
|
| 170 |
<currentInterpretation>true</currentInterpretation> |
|
| 171 |
<interpretationDate>epoch</interpretationDate> |
|
| 172 |
<party_ID> |
|
| 173 |
<party/> |
|
| 174 |
</party_ID> |
|
| 175 |
</taxonInterpretation> |
|
| 176 |
<taxonInterpretation> |
|
| 177 |
<ROLE_ID> |
|
| 178 |
<aux_Role> |
|
| 179 |
<roleCode>identifier</roleCode> |
|
| 180 |
</aux_Role> |
|
| 181 |
</ROLE_ID> |
|
| 182 |
<plantConcept_ID> |
|
| 183 |
<plantConcept> |
|
| 184 |
<plantStatus> |
|
| 185 |
<plantLevel>Genus</plantLevel> |
|
| 186 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 187 |
<startDate>epoch</startDate> |
|
| 188 |
<party_ID> |
|
| 189 |
<party/> |
|
| 190 |
</party_ID> |
|
| 191 |
</plantStatus> |
|
| 192 |
<reference_ID> |
|
| 193 |
<reference/> |
|
| 194 |
</reference_ID> |
|
| 195 |
<plantName_ID> |
|
| 196 |
<plantName> |
|
| 197 |
<plantName>Cariniana</plantName> |
|
| 198 |
</plantName> |
|
| 199 |
</plantName_ID> |
|
| 200 |
</plantConcept> |
|
| 201 |
</plantConcept_ID> |
|
| 202 |
<interpretationType>Author</interpretationType> |
|
| 203 |
<originalInterpretation>true</originalInterpretation> |
|
| 204 |
<currentInterpretation>true</currentInterpretation> |
|
| 205 |
<interpretationDate>epoch</interpretationDate> |
|
| 206 |
<party_ID> |
|
| 207 |
<party/> |
|
| 208 |
</party_ID> |
|
| 209 |
</taxonInterpretation> |
|
| 210 |
<taxonInterpretation> |
|
| 211 |
<ROLE_ID> |
|
| 212 |
<aux_Role> |
|
| 213 |
<roleCode>identifier</roleCode> |
|
| 214 |
</aux_Role> |
|
| 215 |
</ROLE_ID> |
|
| 216 |
<plantConcept_ID> |
|
| 217 |
<plantConcept> |
|
| 218 |
<plantStatus> |
|
| 219 |
<plantLevel>Species</plantLevel> |
|
| 220 |
<plantConceptStatus>accepted</plantConceptStatus> |
|
| 221 |
<startDate>epoch</startDate> |
|
| 222 |
<party_ID> |
|
| 223 |
<party/> |
|
| 224 |
</party_ID> |
|
| 225 |
</plantStatus> |
|
| 226 |
<reference_ID> |
|
| 227 |
<reference> |
|
| 228 |
<referenceContributor> |
|
| 229 |
<referenceParty_ID> |
|
| 230 |
<referenceParty> |
|
| 231 |
<surname>(Raddi) Kuntze</surname> |
|
| 232 |
<givenName>(Raddi) Kuntze</givenName> |
|
| 233 |
</referenceParty> |
|
| 234 |
</referenceParty_ID> |
|
| 235 |
</referenceContributor> |
|
| 236 |
</reference> |
|
| 237 |
</reference_ID> |
|
| 238 |
<plantName_ID> |
|
| 239 |
<plantName> |
|
| 240 |
<plantName>estrellensis</plantName> |
|
| 241 |
</plantName> |
|
| 242 |
</plantName_ID> |
|
| 243 |
</plantConcept> |
|
| 244 |
</plantConcept_ID> |
|
| 245 |
<interpretationType>Author</interpretationType> |
|
| 246 |
<originalInterpretation>true</originalInterpretation> |
|
| 247 |
<currentInterpretation>true</currentInterpretation> |
|
| 248 |
<interpretationDate>epoch</interpretationDate> |
|
| 249 |
<party_ID> |
|
| 250 |
<party/> |
|
| 251 |
</party_ID> |
|
| 252 |
</taxonInterpretation> |
|
| 253 |
<definedValue fkey="tableRecord_ID"> |
|
| 254 |
<userDefined_ID> |
|
| 255 |
<userDefined> |
|
| 256 |
<tableName>stemLocation</tableName> |
|
| 257 |
<userDefinedName>habitat</userDefinedName> |
|
| 258 |
<userDefinedType>varchar</userDefinedType> |
|
| 259 |
</userDefined> |
|
| 260 |
</userDefined_ID> |
|
| 261 |
<definedValue>Floodplain forest</definedValue> |
|
| 262 |
</definedValue> |
|
| 263 |
<definedValue fkey="tableRecord_ID"> |
|
| 264 |
<userDefined_ID> |
|
| 265 |
<userDefined> |
|
| 266 |
<tableName>stemLocation</tableName> |
|
| 267 |
<userDefinedName>plantFungusDescription</userDefinedName> |
|
| 268 |
<userDefinedType>varchar</userDefinedType> |
|
| 269 |
</userDefined> |
|
| 270 |
</userDefined_ID> |
|
| 271 |
<definedValue>with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</definedValue> |
|
| 272 |
</definedValue> |
|
| 273 |
</stemLocation> |
|
| 274 |
</stemCount> |
|
| 275 |
</taxonImportance> |
|
| 276 |
<observation_ID> |
|
| 277 |
<observation> |
|
| 278 |
<obsStartDate>1984-08-20</obsStartDate> |
|
| 279 |
<plot_ID> |
|
| 280 |
<plot> |
|
| 281 |
<place> |
|
| 282 |
<namedPlace_ID> |
|
| 283 |
<namedPlace> |
|
| 284 |
<placeSystem>area|country|territory</placeSystem> |
|
| 285 |
<placeName>Peru</placeName> |
|
| 286 |
</namedPlace> |
|
| 287 |
</namedPlace_ID> |
|
| 288 |
</place> |
|
| 289 |
<place> |
|
| 290 |
<namedPlace_ID> |
|
| 291 |
<namedPlace> |
|
| 292 |
<placeSystem>region|state|province</placeSystem> |
|
| 293 |
<placeName>Madre de Dios</placeName> |
|
| 294 |
</namedPlace> |
|
| 295 |
</namedPlace_ID> |
|
| 296 |
</place> |
|
| 297 |
<place> |
|
| 298 |
<namedPlace_ID> |
|
| 299 |
<namedPlace> |
|
| 300 |
<placeSystem>county</placeSystem> |
|
| 301 |
<placeName>Manú</placeName> |
|
| 302 |
<placeDescription>Parque Nacional del Manu. Río Manu: Cocha Casha Station</placeDescription> |
|
| 303 |
</namedPlace> |
|
| 304 |
</namedPlace_ID> |
|
| 305 |
</place> |
|
| 306 |
<realLongitude>-71.40</realLongitude> |
|
| 307 |
<realLatitude>-11.80</realLatitude> |
|
| 308 |
<elevationRange>0.0</elevationRange> |
|
| 309 |
<elevation>350.0</elevation> |
|
| 310 |
<confidentialityStatus>0</confidentialityStatus> |
|
| 311 |
<authorPlotCode>816590</authorPlotCode> |
|
| 312 |
</plot> |
|
| 313 |
</plot_ID> |
|
| 314 |
</observation> |
|
| 315 |
</observation_ID> |
|
| 316 |
</taxonObservation> |
|
| 317 |
<taxonObservation id="1"> |
|
| 318 |
<taxonImportance> |
|
| 319 |
<stemCount> |
|
| 320 |
<stemCount>1</stemCount> |
|
| 321 |
<stemLocation> |
|
| 322 |
<taxonInterpretation> |
|
| 323 |
<ROLE_ID> |
|
| 324 |
<aux_Role> |
|
| 325 |
<roleCode>collector</roleCode> |
|
| 326 |
</aux_Role> |
|
| 327 |
</ROLE_ID> |
|
| 328 |
<museum_ID> |
|
| 329 |
<party> |
|
| 330 |
<OrganizationName>NY Herbarium</OrganizationName> |
|
| 331 |
</party> |
|
| 332 |
</museum_ID> |
|
| 333 |
<plantConcept_ID> |
|
| 334 |
<plantConcept> |
|
| 335 |
<reference_ID> |
|
| 336 |
<reference/> |
|
Also available in: Unified diff
Renamed test/map output to remove CSV/DB indicator because that is now specified in the datasource name