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Revision 1278

inputs/UArizona/maps/DwC.specimens.csv: Removed fields already present in DwC mappings

View differences:

inputs/UArizona/maps/DwC.specimens.csv
4 4
"CatalogNumberNumeric","catalogNumber",
5 5
"CollectedDate","eventDate/_alt/2",
6 6
"VerbatimCollectingDate","eventDate/_alt/0",
7
"FieldNotes","fieldNotes",
8
"HigherGeography",,
9
"IslandGroup",,
10
"Island",,
11
"DecimalLatitude",,
12
"DecimalLongitude",,
13 7
"HorizontalDatum",,
14 8
"OriginalCoordinateSystem",,
15
"VerbatimLatitude",,
16
"VerbatimLongitude",,
17 9
"GeoRefMethod",,
18 10
"LatLongComments",,
19
"VerbatimElevation",,
20
"MinimumDepthInMeters",,
21
"MaximumDepthInMeters",,
22
"VerbatimDepth",,
23 11
"IdentificationModifier",,
24 12
"IdentifiedDate","dateIdentified/_alt/0",
25 13
"Tissues",,
inputs/UArizona/maps/DwC.specimens.full.csv
38 38
Dcterms:rights,Dcterms:rights
39 39
Dcterms:rightsHolder,Dcterms:rightsHolder
40 40
Dcterms:type,Dcterms:type
41
DecimalLatitude,DecimalLatitude
42
DecimalLongitude,DecimalLongitude
41 43
Disposition,Disposition
42 44
DynamicProperties,DynamicProperties
43 45
EarliestAgeOrLowestStage,EarliestAgeOrLowestStage
......
52 54
EventRemarks,EventRemarks
53 55
EventTime,EventTime
54 56
Family,Family
57
FieldNotes,FieldNotes
55 58
FieldNumber,FieldNumber
56 59
FootprintSRS,FootprintSRS
57 60
FootprintSpatialFit,FootprintSpatialFit
......
69 72
Group,Group
70 73
Habitat,Habitat
71 74
HigherClassification,HigherClassification
75
HigherGeography,HigherGeography
72 76
HigherGeographyID,HigherGeographyID
73 77
HighestBiostratigraphicZone,HighestBiostratigraphicZone
74 78
IdentificationID,IdentificationID
......
83 87
InfraspecificEpithet,InfraspecificEpithet
84 88
InstitutionCode,InstitutionCode
85 89
InstitutionID,InstitutionID
90
Island,Island
91
IslandGroup,IslandGroup
86 92
JulianDay,JulianDay
87 93
Kingdom,Kingdom
88 94
LatestAgeOrHighestStage,LatestAgeOrHighestStage
......
100 106
Longitude,Longitude
101 107
LowestBiostratigraphicZone,LowestBiostratigraphicZone
102 108
MaximumDepth,MaximumDepth
109
MaximumDepthInMeters,MaximumDepthInMeters
103 110
MaximumDistanceAboveSurfaceInMeters,MaximumDistanceAboveSurfaceInMeters
104 111
MaximumElevation,MaximumElevation
105 112
MaximumElevationInMeters,MaximumElevationInMeters
......
114 121
MeasurementValue,MeasurementValue
115 122
Member,Member
116 123
MinimumDepth,MinimumDepth
124
MinimumDepthInMeters,MinimumDepthInMeters
117 125
MinimumDistanceAboveSurfaceInMeters,MinimumDistanceAboveSurfaceInMeters
118 126
MinimumElevation,MinimumElevation
119 127
MinimumElevationInMeters,MinimumElevationInMeters
......
179 187
TypeStatus,TypeStatus
180 188
VerbatimCoordinateSystem,VerbatimCoordinateSystem
181 189
VerbatimCoordinates,VerbatimCoordinates
190
VerbatimDepth,VerbatimDepth
191
VerbatimElevation,VerbatimElevation
182 192
VerbatimEventDate,VerbatimEventDate
193
VerbatimLatitude,VerbatimLatitude
183 194
VerbatimLocality,VerbatimLocality
195
VerbatimLongitude,VerbatimLongitude
184 196
VerbatimSRS,VerbatimSRS
185 197
VerbatimTaxonRank,VerbatimTaxonRank
186 198
VernacularName,VernacularName
......
241 253
eventRemarks,eventRemarks
242 254
eventTime,eventTime
243 255
family,family
244
FieldNotes,fieldNotes,
245 256
fieldNotes,fieldNotes
246 257
fieldNumber,fieldNumber
247 258
footprintSRS,footprintSRS
......
371 382
year,year
372 383
AgeClass,,
373 384
CatalogNumber,,Map to nothing so it doesn't overwrite CatalogNumberNumeric
374
DecimalLatitude,,
375
DecimalLongitude,,
376 385
GenGankNum,,
377 386
GeoRefMethod,,
378
HigherGeography,,
379 387
HorizontalDatum,,
380 388
IdentificationModifier,,
381
Island,,
382
IslandGroup,,
383 389
LatLongComments,,
384
MaximumDepthInMeters,,
385
MinimumDepthInMeters,,
386 390
OriginalCoordinateSystem,,
387 391
OtherCatalogNumber,,
388 392
RelatedCatalogItems,,
389 393
Remarks,,
390 394
Tissues,,
391
VerbatimDepth,,
392
VerbatimElevation,,
393
VerbatimLatitude,,
394
VerbatimLongitude,,
inputs/UArizona/maps/VegBIEN.specimens.csv
22 22
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
23 23
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
24 24
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
25
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
25 26
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
26 27
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
28
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
27 29
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
30
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
28 31
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
29 32
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
33
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
30 34
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
31 35
EventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
32 36
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
......
36 40
YearCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/1/_date/year,,44
37 41
CollectedDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2,,44
38 42
MaximumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
43
MaximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
39 44
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
40 45
MinimumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74
46
MinimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74
41 47
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74
42 48
ScientificNameAuthor,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Authority]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
43 49
ScientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Authority]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
......
123 129
Dcterms:rights,,,3
124 130
Dcterms:rightsHolder,,,4
125 131
Dcterms:type,,,0
126
DecimalLatitude,,
127
DecimalLongitude,,
128 132
Disposition,,,33
129 133
DynamicProperties,,,18
130 134
EarliestAgeOrLowestStage,,,109
......
152 156
GeoreferencedDate,,,95
153 157
Group,,,114
154 158
HigherClassification,,,141
155
HigherGeography,,
159
HigherGeography,,,58
156 160
HigherGeographyID,,,57
157 161
HighestBiostratigraphicZone,,,112
158 162
HorizontalDatum,,
......
166 170
IndividualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
167 171
InformationWithheld,,,16
168 172
InstitutionCode,,,
169
Island,,
170
IslandGroup,,
173
Island,,,62
174
IslandGroup,,,61
171 175
JulianDay,,Brad: OMIT,50
172 176
LatLongComments,,
173 177
LatestAgeOrHighestStage,,,110
......
181 185
LocationID,,,56
182 186
LocationRemarks,,,79
183 187
LowestBiostratigraphicZone,,,111
184
MaximumDepthInMeters,,
185 188
MaximumDistanceAboveSurfaceInMeters,,,77
186 189
MeasurementAccuracy,,,169
187 190
MeasurementDeterminedBy,,,172
......
193 196
MeasurementUnit,,,170
194 197
MeasurementValue,,,168
195 198
Member,,,116
196
MinimumDepthInMeters,,
197 199
MinimumDistanceAboveSurfaceInMeters,,,76
198 200
Month,,,49
199 201
Municipality,,,67
......
246 248
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
247 249
VerbatimCoordinateSystem,,,83
248 250
VerbatimCoordinates,,,80
249
VerbatimDepth,,
250
VerbatimElevation,,
251
VerbatimDepth,,,73
252
VerbatimElevation,,,70
251 253
VerbatimEventDate,,,51
252
VerbatimLatitude,,
253
VerbatimLongitude,,
254 254
VerbatimSRS,,,84
255 255
VerbatimTaxonRank,,,152
256 256
VernacularName,,,154

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