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root/trunk/inputs @ 12815

Name Size Revision Age Author Comment
  .NCBI 12029 almost 11 years Aaron Marcuse-Kubitza inputs/.geoscrub/county_centroids/test.xml.ref,...
  .TNRS 12779 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  .archive 11717 about 11 years Aaron Marcuse-Kubitza inputs/: removed SALVIAS-CSV, because this is a...
  .geoscrub 12029 almost 11 years Aaron Marcuse-Kubitza inputs/.geoscrub/county_centroids/test.xml.ref,...
  .herbaria 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  ACAD 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  ARIZ 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  BRIT 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  CTFS 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  CVS 12757 over 10 years Aaron Marcuse-Kubitza inputs/CVS/plot_/postprocess.sql: add unique co...
  FIA 12028 almost 11 years Aaron Marcuse-Kubitza inputs/FIA/taxon_observation.**/header.csv: upd...
  GBIF 12779 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  HIBG 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  HVAA 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  IRMNG 12779 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  IUCN 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  JBM 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  MO 12785 over 10 years Aaron Marcuse-Kubitza inputs/MO/Specimen/test.xml.ref: updated, which...
  MT 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  Madidi 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  NCU 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  NVS 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  NY 12039 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: verify/%.out: use a *.sq...
  QFA 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  REMIB 12516 over 10 years Aaron Marcuse-Kubitza bugfix: *.sql: public.source_by_shortname(): ne...
  SALVIAS 12679 over 10 years Aaron Marcuse-Kubitza inputs/SALVIAS/validations.sql: implemented _pl...
  SpeciesLink 12516 over 10 years Aaron Marcuse-Kubitza bugfix: *.sql: public.source_by_shortname(): ne...
  TEAM 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  TEX 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  TRT 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  TRTE 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  TurboVeg 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  U 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  UBC 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  UNCC 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  VASCAN 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  VegBIEN 12112 almost 11 years Aaron Marcuse-Kubitza fix: inputs/VegBIEN/Redmine/wiki/.htaccess: red...
  VegBank 12792 over 10 years Aaron Marcuse-Kubitza inputs/VegBank/run: `rm=1 import()`: updated ru...
  WIN 12784 over 10 years Aaron Marcuse-Kubitza inputs/WIN/Specimen/test.xml.ref: updated to ma...
  XAL 12030 almost 11 years Aaron Marcuse-Kubitza added inputs/XAL/Specimen/_no_import, since thi...
  analytical_db 11567 about 11 years Aaron Marcuse-Kubitza added inputs/analytical_db/_archive/
  bien2_traits 12367 almost 11 years Aaron Marcuse-Kubitza fix: schemas/vegbien.sql: _traits_08_taxonname_...
  bien_web 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  newWorld 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
  test_taxonomic_names 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
.htaccess 334 Bytes 8513 over 11 years Aaron Marcuse-Kubitza added .htaccess files for inputs/, schemas/ bec...
.rsync_filter.download 18 Bytes 10043 over 11 years Aaron Marcuse-Kubitza inputs/.rsync_ignore: test*.xml: turn on syncin...
.rsync_filter.starscream.download 24 Bytes 10039 over 11 years Aaron Marcuse-Kubitza inputs/.rsync_ignore: install.log.sql: only exc...
.rsync_filter.starscream.upload 24 Bytes 10039 over 11 years Aaron Marcuse-Kubitza inputs/.rsync_ignore: install.log.sql: only exc...
.rsync_filter.vegbiendev.upload 18 Bytes 10067 over 11 years Aaron Marcuse-Kubitza inputs/: don't upload test*.xml to jupiter on v...
BIEN2.datasources.xlsx 14.8 KB 3607 over 12 years Aaron Marcuse-Kubitza Added inputs/BIEN2.datasources.xlsx (formerly b...
Makefile 540 Bytes 10026 over 11 years Aaron Marcuse-Kubitza inputs/Makefile: download-logs: use bin/sync_up...
datasource_release_status.xlsx 33 Bytes 11942 almost 11 years Aaron Marcuse-Kubitza inputs/datasource_release_status.xlsx: renamed ...
import.stats.xls 1.2 MB 12158 almost 11 years Aaron Marcuse-Kubitza inputs/import.stats.xls: updated import times
input.Makefile 18.7 KB 12795 over 10 years Aaron Marcuse-Kubitza fix: inputs/input.Makefile: removed no longer u...
publishable datasources.xlsx 6.06 KB 12005 almost 11 years Aaron Marcuse-Kubitza inputs/publishable datasources.xlsx: updated
publishable datasources.xlsx.url 88 Bytes 11942 almost 11 years Aaron Marcuse-Kubitza inputs/datasource_release_status.xlsx: renamed ...
run 159 Bytes 12752 over 10 years Aaron Marcuse-Kubitza inputs/run: postprocess(): documented runtime (...
  • svn:ignore: .~*

Latest revisions

# Date Author Comment
12795 03/21/2014 02:16 AM Aaron Marcuse-Kubitza

fix: inputs/input.Makefile: removed no longer used special handling of XML inputs, support for which was never added to the Makefile. (bin/map, however, does support importing an XML file into a database.) this fixes a bug in XAL, which used to abort with an error but now just imports an empty table.
12794 03/21/2014 12:34 AM Aaron Marcuse-Kubitza

fix: inputs/input.Makefile: %/install: don't ignore errors if table does not exist, to ensure a proper errexit. this is now possible because every dir that this target is being run on should be a data dir. (Source/ used to be a metadata-only dir.)
12793 03/21/2014 12:31 AM Aaron Marcuse-Kubitza

bugfix: inputs/input.Makefile: $(cleanup): need `set -o pipefail`
12792 03/21/2014 12:02 AM Aaron Marcuse-Kubitza

inputs/VegBank/run: `rm=1 import()`: updated runtime (1 h)
12791 03/20/2014 11:54 PM Aaron Marcuse-Kubitza

inputs/VegBank/taxon_observation.**/test.xml.ref: updated inserted row count
12790 03/20/2014 11:54 PM Aaron Marcuse-Kubitza

inputs/VegBank/projectcontributor_/test.xml.ref: updated inserted row count
12788 03/20/2014 10:44 PM Aaron Marcuse-Kubitza

bugfix: inputs/VegBank/import_order.txt: added missing project, needed to trigger the staging table renaming for the project table
12787 03/20/2014 10:42 PM Aaron Marcuse-Kubitza

inputs/VegBank/run: documented `rm=1 import()` runtime (>1.5 h)
12786 03/20/2014 10:40 PM Aaron Marcuse-Kubitza

inputs/VegBank/run: documented `datasrc_make sql/install` runtime (25 min)
12785 03/20/2014 08:27 PM Aaron Marcuse-Kubitza

inputs/MO/Specimen/test.xml.ref: updated, which adds dateCollected mappings

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