|
1
|
SELECT '# specimen replicates' AS ___;
|
|
2
|
SELECT count(*) AS count
|
|
3
|
FROM specimenreplicate
|
|
4
|
WHERE datasource_id =
|
|
5
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
6
|
;
|
|
7
|
|
|
8
|
SELECT '# families' AS ___;
|
|
9
|
SELECT count(DISTINCT plantname) AS count
|
|
10
|
FROM specimenreplicate
|
|
11
|
JOIN taxondetermination USING (taxonoccurrence_id)
|
|
12
|
JOIN plantconcept USING (plantconcept_id)
|
|
13
|
JOIN plantname
|
|
14
|
ON plantname.plantname_id = plantconcept.plantname_id
|
|
15
|
AND plantname.rank = 'Family'
|
|
16
|
WHERE datasource_id =
|
|
17
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
18
|
AND taxondetermination.isoriginal
|
|
19
|
;
|
|
20
|
|
|
21
|
SELECT '# genera' AS ___;
|
|
22
|
SELECT count(DISTINCT plantname) AS count
|
|
23
|
FROM specimenreplicate
|
|
24
|
JOIN taxondetermination USING (taxonoccurrence_id)
|
|
25
|
JOIN plantconcept USING (plantconcept_id)
|
|
26
|
JOIN plantname
|
|
27
|
ON plantname.plantname_id = plantconcept.plantname_id
|
|
28
|
AND plantname.rank = 'Genus'
|
|
29
|
WHERE datasource_id =
|
|
30
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
31
|
AND taxondetermination.isoriginal
|
|
32
|
;
|
|
33
|
|
|
34
|
SELECT '# species' AS ___;
|
|
35
|
SELECT
|
|
36
|
count(DISTINCT genus_plantname.plantname||','||species_plantname.plantname)
|
|
37
|
AS count
|
|
38
|
FROM specimenreplicate
|
|
39
|
JOIN taxondetermination AS genus_taxondet
|
|
40
|
ON genus_taxondet.taxonoccurrence_id = specimenreplicate.taxonoccurrence_id
|
|
41
|
AND genus_taxondet.isoriginal
|
|
42
|
JOIN plantconcept AS genus_plantconcept
|
|
43
|
ON genus_plantconcept.plantconcept_id = genus_taxondet.plantconcept_id
|
|
44
|
JOIN plantname AS genus_plantname
|
|
45
|
ON genus_plantname.plantname_id = genus_plantconcept.plantname_id
|
|
46
|
AND genus_plantname.rank = 'Genus'
|
|
47
|
JOIN taxondetermination AS species_taxondet
|
|
48
|
ON species_taxondet.taxonoccurrence_id =
|
|
49
|
specimenreplicate.taxonoccurrence_id
|
|
50
|
AND species_taxondet.isoriginal
|
|
51
|
JOIN plantconcept AS species_plantconcept
|
|
52
|
ON species_plantconcept.plantconcept_id = species_taxondet.plantconcept_id
|
|
53
|
JOIN plantname AS species_plantname
|
|
54
|
ON species_plantname.plantname_id = species_plantconcept.plantname_id
|
|
55
|
AND species_plantname.rank = 'Species'
|
|
56
|
WHERE datasource_id =
|
|
57
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
58
|
;
|
|
59
|
|
|
60
|
SELECT '# binomials' AS ___;
|
|
61
|
SELECT count(DISTINCT plantname) AS count
|
|
62
|
FROM specimenreplicate
|
|
63
|
JOIN taxondetermination USING (taxonoccurrence_id)
|
|
64
|
JOIN plantconcept USING (plantconcept_id)
|
|
65
|
JOIN plantname
|
|
66
|
ON plantname.plantname_id = plantconcept.plantname_id
|
|
67
|
AND plantname.rank = 'Binomial'
|
|
68
|
WHERE datasource_id =
|
|
69
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
70
|
AND taxondetermination.isoriginal
|
|
71
|
;
|
|
72
|
|
|
73
|
SELECT 'collection codes' AS ___;
|
|
74
|
SELECT DISTINCT collectioncode_dwc
|
|
75
|
FROM specimenreplicate
|
|
76
|
WHERE datasource_id =
|
|
77
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
78
|
;
|
|
79
|
|
|
80
|
SELECT '# catalog numbers' AS ___;
|
|
81
|
SELECT count(DISTINCT catalognumber_dwc) AS count
|
|
82
|
FROM specimenreplicate
|
|
83
|
WHERE datasource_id =
|
|
84
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
85
|
;
|
|
86
|
|
|
87
|
SELECT 'duplicate catalog numbers' AS ___;
|
|
88
|
SELECT catalognumber_dwc, count(*) AS count
|
|
89
|
FROM specimenreplicate
|
|
90
|
WHERE datasource_id =
|
|
91
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
92
|
GROUP BY catalognumber_dwc
|
|
93
|
HAVING count(*) > 1
|
|
94
|
ORDER BY catalognumber_dwc NULLS FIRST/* to match MySQL */
|
|
95
|
;
|
|
96
|
|
|
97
|
SELECT '# counties' AS ___;
|
|
98
|
SELECT count(DISTINCT
|
|
99
|
COALESCE(country_namedplace.placename, '')
|
|
100
|
||','|| COALESCE(state_namedplace.placename, '')
|
|
101
|
||','|| COALESCE(county_namedplace.placename, '')
|
|
102
|
) AS count
|
|
103
|
FROM specimenreplicate
|
|
104
|
JOIN taxonoccurrence USING (taxonoccurrence_id)
|
|
105
|
JOIN locationevent USING (locationevent_id)
|
|
106
|
JOIN locationdetermination AS country_locationdet
|
|
107
|
ON country_locationdet.location_id = locationevent.location_id
|
|
108
|
JOIN namedplace AS country_namedplace
|
|
109
|
ON country_namedplace.namedplace_id = country_locationdet.namedplace_id
|
|
110
|
AND country_namedplace.placesystem = 'area|country|territory'
|
|
111
|
JOIN locationdetermination AS state_locationdet
|
|
112
|
ON state_locationdet.location_id = locationevent.location_id
|
|
113
|
JOIN namedplace AS state_namedplace
|
|
114
|
ON state_namedplace.namedplace_id = state_locationdet.namedplace_id
|
|
115
|
AND state_namedplace.placesystem = 'region|state|province'
|
|
116
|
JOIN locationdetermination AS county_locationdet
|
|
117
|
ON county_locationdet.location_id = locationevent.location_id
|
|
118
|
JOIN namedplace AS county_namedplace
|
|
119
|
ON county_namedplace.namedplace_id = county_locationdet.namedplace_id
|
|
120
|
AND county_namedplace.placesystem = 'county'
|
|
121
|
WHERE specimenreplicate.datasource_id =
|
|
122
|
(SELECT party_id FROM party WHERE organizationname = :datasource)
|
|
123
|
;
|
