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| Revision:
Name Size Revision Age Author Comment
  BIEN2 12779 almost 11 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  _archive 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 12225 almost 11 years Aaron Marcuse-Kubitza _license/non-open-source/applies_to.txt: clarif...
  backups 13008 over 10 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated
  bin 12995 over 10 years Aaron Marcuse-Kubitza bin/make_analytical_db: removed remake_diff_tab...
  config 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  derived 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  exports 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
  inputs 13018 over 10 years Aaron Marcuse-Kubitza lib/common.Makefile: added $(nice) and use it e...
  issues 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 13019 over 10 years Aaron Marcuse-Kubitza fix: lib/common.Makefile: $(nice): use an incre...
  mappings 12961 over 10 years Aaron Marcuse-Kubitza fix: mappings/VegCore-VegBIEN.csv: taxonoccurre...
  planning 12947 over 10 years Aaron Marcuse-Kubitza planning/workflow/bien3_architecture/stage_I.pn...
  schemas 12994 over 10 years Aaron Marcuse-Kubitza bugfix: schemas/vegbien.sql: schemas/vegbien.sq...
  validation 12965 over 10 years Aaron Marcuse-Kubitza validation/aggregating/specimens/qualitative_va...
  web 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
  wiki 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
.htaccess 326 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.18 KB 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
Makefile 13.7 KB 13015 over 10 years Aaron Marcuse-Kubitza /Makefile: postgres_restart-Linux: documented t...
README.TXT 31.1 KB 13026 over 10 years Aaron Marcuse-Kubitza /README.TXT: Full database import: added steps ...
fix_perms 97 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 518 Bytes 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
unmapped_terms.csv 33 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
13026 04/01/2014 04:24 PM Aaron Marcuse-Kubitza

/README.TXT: Full database import: added steps to manually reimport the applicable datasources if there are errors due to exceeding available disk space

13025 04/01/2014 04:13 PM Aaron Marcuse-Kubitza

/README.TXT: Full database import: removed extra `ssh -t vegbiendev.nceas.ucsb.edu` before "upload logs", because the previous steps also occur on vegbiendev

13024 04/01/2014 04:04 PM Aaron Marcuse-Kubitza

/README.TXT: Notes on system stability: added recommendation to maintain a snapshot copy of the VM as it was at the last successful import, for fallback use if a system upgrade breaks anything. system upgrades on the snapshot VM should be disabled completely, and because this will also disable security fixes, the snapshot VM should be disconnected from the internet and all networking interfaces. (this is an unfortunate consequence of modern OSes being written in non-memory-safe languages such as C and C++.)

13023 04/01/2014 03:43 PM Aaron Marcuse-Kubitza

/README.TXT: Full database import: disk space: documented that a higher high-water mark actually occurs later in the import, so that the disk usage issue actually remains a problem after the very beginning

13022 04/01/2014 03:37 PM Aaron Marcuse-Kubitza

fix: /README.TXT: Full database import: disk space: increased the minimum free space recommendation to 1 TB, because analysis of the disk usage during the beginning of the import shows that actually close to the entire amount is being used. however, this problem is normally undetectable unless the disk space is specifically checked, because it only manifests itself if the available disk space is exceeded completely.

13021 04/01/2014 02:04 PM Aaron Marcuse-Kubitza

/README.TXT: Full database import: documented that the beginning of the import should be scheduled at a time when the DB will not be needed for other uses, because vegbiendev will be slow for the first few hours of the import due to the import using all the available cores

13020 04/01/2014 01:36 PM Aaron Marcuse-Kubitza

/README.TXT: Full database import: documented that CPU load warning e-mails can safely be ignored. they happen because the parallel imports use all the available cores.

13019 04/01/2014 01:31 PM Aaron Marcuse-Kubitza

fix: lib/common.Makefile: $(nice): use an increment of +10 instead of +5 because +5 still leaves the shell sluggish

13018 04/01/2014 01:29 PM Aaron Marcuse-Kubitza

lib/common.Makefile: added $(nice) and use it everywhere its definition is used

13017 04/01/2014 01:14 PM Aaron Marcuse-Kubitza

/README.TXT: Full database import: exiting `screen`: clarify that you must use `exit`, as Ctrl+D gets disabled to prevent accidental exits

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