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root/trunk @ 13077

Name Size Revision Age Author Comment
  BIEN2 12779 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  _archive 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 12225 almost 11 years Aaron Marcuse-Kubitza _license/non-open-source/applies_to.txt: clarif...
  backups 13008 over 10 years Aaron Marcuse-Kubitza backups/TNRS.backup.md5: updated
  bin 13077 over 10 years Aaron Marcuse-Kubitza bin/repl: match as whole-word text (like SQL id...
  config 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  derived 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  exports 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
  inputs 13075 over 10 years Aaron Marcuse-Kubitza fix: inputs/U/Specimen/map.csv: Genus: remapped...
  issues 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 13076 over 10 years Aaron Marcuse-Kubitza bin/repl, lib/sql_gen.py Expression transformin...
  mappings 12961 over 10 years Aaron Marcuse-Kubitza fix: mappings/VegCore-VegBIEN.csv: taxonoccurre...
  planning 13053 over 10 years Aaron Marcuse-Kubitza planning/workflow/bien3_architecture/stage_I.pn...
  schemas 13071 over 10 years Aaron Marcuse-Kubitza schemas/vegbien.sql: remake_diff_tables(schema ...
  validation 13074 over 10 years Aaron Marcuse-Kubitza validation/aggregating/pipeline/validations_on_...
  web 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
  wiki 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
.htaccess 326 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.18 KB 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
Makefile 13.7 KB 13015 over 10 years Aaron Marcuse-Kubitza /Makefile: postgres_restart-Linux: documented t...
README.TXT 31.5 KB 13031 over 10 years Aaron Marcuse-Kubitza /README.TXT: Full database import: disk space: ...
fix_perms 97 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 518 Bytes 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
unmapped_terms.csv 33 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
13077 04/09/2014 02:52 AM Aaron Marcuse-Kubitza

bin/repl: match as whole-word text (like SQL identifier): documented that this is a generalization of lib/sql_gen.py map_expr() to work on entire source files
13076 04/09/2014 02:50 AM Aaron Marcuse-Kubitza

bin/repl, lib/sql_gen.py Expression transforming: documented that this can also be done in Postgres with expression substitution (wiki.vegpath.org/Postgres_queries#expression-substitution)
13075 04/08/2014 03:49 PM Aaron Marcuse-Kubitza

fix: inputs/U/Specimen/map.csv: Genus: remapped to taxonName because this field is actually mislabeled in the original column names
13074 04/08/2014 02:55 PM Aaron Marcuse-Kubitza

validation/aggregating/pipeline/validations_on_sparse_datasources.odg: not applicable "✓": increased font size so the size of the character matches the surrounding text
13073 04/08/2014 02:52 PM Aaron Marcuse-Kubitza

validation/aggregating/pipeline/validations_on_sparse_datasources.odg: removed = lines for each input query, because they clutter up the diagram and the "same, so don't need to rewrite" message now shows this as well
13072 04/08/2014 02:50 PM Aaron Marcuse-Kubitza

validation/aggregating/pipeline/validations_on_sparse_datasources.odg: added the denormalized VegCore schema approach for comparison, as requested by Mark
13071 04/08/2014 01:52 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: remake_diff_tables(schema text): removed bien2_traits runtime because this applies only to one datasource. the bien2_traits runtime is now documented in inputs/bien2_traits/run.
13070 04/08/2014 01:40 PM Aaron Marcuse-Kubitza

inputs/NY/run: `make inputs/NY/validate`: updated runtime (6.5 min). this increases as more queries are able to run successfully.
13069 04/08/2014 01:38 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: public_validations: schema comment: documented how to run the validations. this information is also in the usage comment for public_validations.remake_diff_table(), but is copied here for easy reference.
13068 04/08/2014 01:19 PM Aaron Marcuse-Kubitza

inputs/SALVIAS/run_: `make inputs/SALVIAS/validate`: documented runtime (5 min)

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