Revision 1316
Added by Aaron Marcuse-Kubitza almost 13 years ago
inputs/NYBG/test/VegBIEN.specimens.xml.ref | ||
---|---|---|
10 | 10 |
<locationdetermination> |
11 | 11 |
<namedplace_id> |
12 | 12 |
<namedplace> |
13 |
<placesystem>area|country|territory</placesystem>
|
|
13 |
<rank>country</rank>
|
|
14 | 14 |
<placename>Peru</placename> |
15 | 15 |
</namedplace> |
16 | 16 |
</namedplace_id> |
... | ... | |
18 | 18 |
<locationdetermination> |
19 | 19 |
<namedplace_id> |
20 | 20 |
<namedplace> |
21 |
<placesystem>region|state|province</placesystem>
|
|
22 |
<placename>Madre de Dios</placename>
|
|
21 |
<rank>county</rank>
|
|
22 |
<placename>Manú</placename>
|
|
23 | 23 |
</namedplace> |
24 | 24 |
</namedplace_id> |
25 | 25 |
</locationdetermination> |
26 | 26 |
<locationdetermination> |
27 | 27 |
<namedplace_id> |
28 | 28 |
<namedplace> |
29 |
<placesystem>county</placesystem>
|
|
30 |
<placename>Manú</placename>
|
|
29 |
<rank>stateProvince</rank>
|
|
30 |
<placename>Madre de Dios</placename>
|
|
31 | 31 |
</namedplace> |
32 | 32 |
</namedplace_id> |
33 | 33 |
</locationdetermination> |
... | ... | |
177 | 177 |
<locationdetermination> |
178 | 178 |
<namedplace_id> |
179 | 179 |
<namedplace> |
180 |
<placesystem>area|country|territory</placesystem>
|
|
180 |
<rank>country</rank>
|
|
181 | 181 |
<placename>Belize</placename> |
182 | 182 |
</namedplace> |
183 | 183 |
</namedplace_id> |
... | ... | |
185 | 185 |
<locationdetermination> |
186 | 186 |
<namedplace_id> |
187 | 187 |
<namedplace> |
188 |
<placesystem>region|state|province</placesystem>
|
|
188 |
<rank>stateProvince</rank>
|
|
189 | 189 |
<placename>Belize District</placename> |
190 | 190 |
</namedplace> |
191 | 191 |
</namedplace_id> |
inputs/NYBG/maps/VegBIEN.specimens.csv | ||
---|---|---|
1 | 1 |
NYBG[DwC]:nybg_raw,VegBIEN:/specimenreplicate,Comments,Order |
2 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
3 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
4 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
5 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
6 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
7 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
2 |
Country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
3 |
country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
4 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
5 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
6 |
StateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
7 |
stateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
8 | 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
9 | 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
10 | 10 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
inputs/SALVIAS/test/VegBIEN.plots.xml.ref | ||
---|---|---|
8 | 8 |
<locationdetermination> |
9 | 9 |
<namedplace_id> |
10 | 10 |
<namedplace> |
11 |
<placesystem>area|country|territory</placesystem>
|
|
12 |
<placename>Ecuador</placename>
|
|
11 |
<rank>continent</rank>
|
|
12 |
<placename>South America</placename>
|
|
13 | 13 |
</namedplace> |
14 | 14 |
</namedplace_id> |
15 | 15 |
</locationdetermination> |
16 | 16 |
<locationdetermination> |
17 | 17 |
<namedplace_id> |
18 | 18 |
<namedplace> |
19 |
<placesystem>continent</placesystem>
|
|
20 |
<placename>South America</placename>
|
|
19 |
<rank>country</rank>
|
|
20 |
<placename>Ecuador</placename>
|
|
21 | 21 |
</namedplace> |
22 | 22 |
</namedplace_id> |
23 | 23 |
</locationdetermination> |
... | ... | |
59 | 59 |
<locationdetermination> |
60 | 60 |
<namedplace_id> |
61 | 61 |
<namedplace> |
62 |
<placesystem>area|country|territory</placesystem>
|
|
63 |
<placename>Germany</placename>
|
|
62 |
<rank>continent</rank>
|
|
63 |
<placename>Europe</placename>
|
|
64 | 64 |
</namedplace> |
65 | 65 |
</namedplace_id> |
66 | 66 |
</locationdetermination> |
67 | 67 |
<locationdetermination> |
68 | 68 |
<namedplace_id> |
69 | 69 |
<namedplace> |
70 |
<placesystem>continent</placesystem>
|
|
71 |
<placename>Europe</placename>
|
|
70 |
<rank>country</rank>
|
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71 |
<placename>Germany</placename>
|
|
72 | 72 |
</namedplace> |
73 | 73 |
</namedplace_id> |
74 | 74 |
</locationdetermination> |
inputs/SALVIAS/maps/VegBIEN.plots.csv | ||
---|---|---|
1 | 1 |
SALVIAS:plotMetadata,VegBIEN:/locationevent,Comments |
2 | 2 |
plot_area_ha,/*_id/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed" |
3 | 3 |
Elev,/*_id/location/elevation/_alt/1,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick. |
4 |
Country,"/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",
|
|
5 |
PolDiv1,"/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",Brad: No; pol1=stateProvince
|
|
6 |
MajorGeo,/*_id/location/locationdetermination(/*_id/namedplace[placesystem=continent])/placename,
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|
7 |
pol2,/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,Brad: No pol2=countyParish
|
|
4 |
MajorGeo,/*_id/location/locationdetermination(/*_id/namedplace[rank=continent])/placename,
|
|
5 |
Country,/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,
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|
6 |
pol2,/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,Brad: No pol2=countyParish
|
|
7 |
PolDiv1,/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,Brad: No; pol1=stateProvince
|
|
8 | 8 |
Locality_Description,/*_id/location/locationnarrative,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX" |
9 | 9 |
slope_aspect,/*_id/location/slopeaspect, |
10 | 10 |
slope_gradient,/*_id/location/slopegradient, |
inputs/NYBG-CSV/test/VegBIEN.specimens.xml.ref | ||
---|---|---|
10 | 10 |
<locationdetermination> |
11 | 11 |
<namedplace_id> |
12 | 12 |
<namedplace> |
13 |
<placesystem>area|country|territory</placesystem>
|
|
13 |
<rank>country</rank>
|
|
14 | 14 |
<placename>Peru</placename> |
15 | 15 |
</namedplace> |
16 | 16 |
</namedplace_id> |
... | ... | |
18 | 18 |
<locationdetermination> |
19 | 19 |
<namedplace_id> |
20 | 20 |
<namedplace> |
21 |
<placesystem>region|state|province</placesystem>
|
|
22 |
<placename>Madre de Dios</placename>
|
|
21 |
<rank>county</rank>
|
|
22 |
<placename>Manú</placename>
|
|
23 | 23 |
</namedplace> |
24 | 24 |
</namedplace_id> |
25 | 25 |
</locationdetermination> |
26 | 26 |
<locationdetermination> |
27 | 27 |
<namedplace_id> |
28 | 28 |
<namedplace> |
29 |
<placesystem>county</placesystem>
|
|
30 |
<placename>Manú</placename>
|
|
29 |
<rank>stateProvince</rank>
|
|
30 |
<placename>Madre de Dios</placename>
|
|
31 | 31 |
</namedplace> |
32 | 32 |
</namedplace_id> |
33 | 33 |
</locationdetermination> |
... | ... | |
177 | 177 |
<locationdetermination> |
178 | 178 |
<namedplace_id> |
179 | 179 |
<namedplace> |
180 |
<placesystem>area|country|territory</placesystem>
|
|
180 |
<rank>country</rank>
|
|
181 | 181 |
<placename>Belize</placename> |
182 | 182 |
</namedplace> |
183 | 183 |
</namedplace_id> |
... | ... | |
185 | 185 |
<locationdetermination> |
186 | 186 |
<namedplace_id> |
187 | 187 |
<namedplace> |
188 |
<placesystem>region|state|province</placesystem>
|
|
188 |
<rank>stateProvince</rank>
|
|
189 | 189 |
<placename>Belize District</placename> |
190 | 190 |
</namedplace> |
191 | 191 |
</namedplace_id> |
inputs/NYBG-CSV/maps/VegBIEN.specimens.csv | ||
---|---|---|
1 | 1 |
NYBG-CSV[DwC],VegBIEN:/specimenreplicate,Comments,Order |
2 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
3 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
4 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
5 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
6 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
7 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
2 |
Country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
3 |
country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
4 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
5 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
6 |
StateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
7 |
stateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
8 | 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
9 | 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
10 | 10 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
inputs/UArizona/test/VegBIEN.specimens.xml.ref | ||
---|---|---|
10 | 10 |
<locationdetermination> |
11 | 11 |
<namedplace_id> |
12 | 12 |
<namedplace> |
13 |
<placesystem>area|country|territory</placesystem>
|
|
13 |
<rank>country</rank>
|
|
14 | 14 |
<placename>Mexico</placename> |
15 | 15 |
</namedplace> |
16 | 16 |
</namedplace_id> |
... | ... | |
18 | 18 |
<locationdetermination> |
19 | 19 |
<namedplace_id> |
20 | 20 |
<namedplace> |
21 |
<placesystem>region|state|province</placesystem>
|
|
21 |
<rank>stateProvince</rank>
|
|
22 | 22 |
<placename>Guerrero</placename> |
23 | 23 |
</namedplace> |
24 | 24 |
</namedplace_id> |
... | ... | |
168 | 168 |
<locationdetermination> |
169 | 169 |
<namedplace_id> |
170 | 170 |
<namedplace> |
171 |
<placesystem>area|country|territory</placesystem>
|
|
171 |
<rank>country</rank>
|
|
172 | 172 |
<placename>Afghanistan</placename> |
173 | 173 |
</namedplace> |
174 | 174 |
</namedplace_id> |
inputs/UArizona/maps/VegBIEN.specimens.csv | ||
---|---|---|
1 | 1 |
UArizona[DwC]:ariz_raw,VegBIEN:/specimenreplicate,Comments,Order |
2 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
3 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
4 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
5 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
6 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
7 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
2 |
Country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
3 |
country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
4 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
5 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
6 |
StateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
7 |
stateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
8 | 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
9 | 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
10 | 10 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
inputs/SALVIAS-CSV/test/VegBIEN.plots.xml.ref | ||
---|---|---|
8 | 8 |
<locationdetermination> |
9 | 9 |
<namedplace_id> |
10 | 10 |
<namedplace> |
11 |
<placesystem>area|country|territory</placesystem>
|
|
12 |
<placename>Peru</placename>
|
|
11 |
<rank>continent</rank>
|
|
12 |
<placename>South America</placename>
|
|
13 | 13 |
</namedplace> |
14 | 14 |
</namedplace_id> |
15 | 15 |
</locationdetermination> |
16 | 16 |
<locationdetermination> |
17 | 17 |
<namedplace_id> |
18 | 18 |
<namedplace> |
19 |
<placesystem>region|state|province</placesystem>
|
|
20 |
<placename>Loreto</placename>
|
|
19 |
<rank>country</rank>
|
|
20 |
<placename>Peru</placename>
|
|
21 | 21 |
</namedplace> |
22 | 22 |
</namedplace_id> |
23 | 23 |
</locationdetermination> |
24 | 24 |
<locationdetermination> |
25 | 25 |
<namedplace_id> |
26 | 26 |
<namedplace> |
27 |
<placesystem>continent</placesystem>
|
|
28 |
<placename>South America</placename>
|
|
27 |
<rank>stateProvince</rank>
|
|
28 |
<placename>Loreto</placename>
|
|
29 | 29 |
</namedplace> |
30 | 30 |
</namedplace_id> |
31 | 31 |
</locationdetermination> |
... | ... | |
58 | 58 |
<locationdetermination> |
59 | 59 |
<namedplace_id> |
60 | 60 |
<namedplace> |
61 |
<placesystem>area|country|territory</placesystem>
|
|
62 |
<placename>Peru</placename>
|
|
61 |
<rank>continent</rank>
|
|
62 |
<placename>South America</placename>
|
|
63 | 63 |
</namedplace> |
64 | 64 |
</namedplace_id> |
65 | 65 |
</locationdetermination> |
66 | 66 |
<locationdetermination> |
67 | 67 |
<namedplace_id> |
68 | 68 |
<namedplace> |
69 |
<placesystem>region|state|province</placesystem>
|
|
70 |
<placename>Loreto</placename>
|
|
69 |
<rank>country</rank>
|
|
70 |
<placename>Peru</placename>
|
|
71 | 71 |
</namedplace> |
72 | 72 |
</namedplace_id> |
73 | 73 |
</locationdetermination> |
74 | 74 |
<locationdetermination> |
75 | 75 |
<namedplace_id> |
76 | 76 |
<namedplace> |
77 |
<placesystem>continent</placesystem>
|
|
78 |
<placename>South America</placename>
|
|
77 |
<rank>stateProvince</rank>
|
|
78 |
<placename>Loreto</placename>
|
|
79 | 79 |
</namedplace> |
80 | 80 |
</namedplace_id> |
81 | 81 |
</locationdetermination> |
inputs/SALVIAS-CSV/test/import.plots.out.ref | ||
---|---|---|
1 |
Inserted 20 new rows into database |
|
1 |
Inserted 14 new rows into database |
inputs/SALVIAS-CSV/maps/VegBIEN.plots.csv | ||
---|---|---|
1 | 1 |
SALVIAS-CSV,VegBIEN:/locationevent,Comments |
2 | 2 |
plot_area_ha,/*_id/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed" |
3 | 3 |
elev_m,/*_id/location/elevation/_alt/1,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick. |
4 |
country,"/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",
|
|
5 |
pol1,"/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",Brad: No; pol1=stateProvince
|
|
6 |
major_geo,/*_id/location/locationdetermination(/*_id/namedplace[placesystem=continent])/placename,
|
|
7 |
pol2,/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,Brad: No pol2=countyParish
|
|
4 |
major_geo,/*_id/location/locationdetermination(/*_id/namedplace[rank=continent])/placename,
|
|
5 |
country,/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,
|
|
6 |
pol2,/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,Brad: No pol2=countyParish
|
|
7 |
pol1,/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,Brad: No; pol1=stateProvince
|
|
8 | 8 |
locality_description,/*_id/location/locationnarrative,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX" |
9 | 9 |
slope_aspect,/*_id/location/slopeaspect, |
10 | 10 |
slope_gradient,/*_id/location/slopegradient, |
mappings/VegX-VegBIEN.plots.csv | ||
---|---|---|
1 | 1 |
VegX:/*s/plotObservation,VegBIEN:/locationevent,Comments |
2 | 2 |
/*UniqueIdentifierID->/*s/plot/area,/*_id/location/area, |
3 | 3 |
/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation,/*_id/location/elevation/_alt/1, |
4 |
/*UniqueIdentifierID->/*s/plot/country,"/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",
|
|
5 |
/*UniqueIdentifierID->/*s/plot/state,"/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",
|
|
6 |
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=majorGeo]/value,/*_id/location/locationdetermination(/*_id/namedplace[placesystem=continent])/placename,
|
|
7 |
/*UniqueIdentifierID->/*s/plot/county,/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,
|
|
4 |
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=majorGeo]/value,/*_id/location/locationdetermination(/*_id/namedplace[rank=continent])/placename,
|
|
5 |
/*UniqueIdentifierID->/*s/plot/country,/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,
|
|
6 |
/*UniqueIdentifierID->/*s/plot/county,/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,
|
|
7 |
/*UniqueIdentifierID->/*s/plot/state,/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,
|
|
8 | 8 |
/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy, |
9 | 9 |
/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT,/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc, |
10 | 10 |
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=localityDescription]/value,/*_id/location/locationnarrative, |
mappings/VegX-VegBIEN.organisms.csv | ||
---|---|---|
1 | 1 |
VegX:/*s/individualOrganismObservation,VegBIEN:/taxonoccurrence,Comments |
2 | 2 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/area,/*_id/locationevent/*_id/location/area, |
3 | 3 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation,/*_id/locationevent/*_id/location/elevation/_alt/1, |
4 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/country,"/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",
|
|
5 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/state,"/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",
|
|
6 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=majorGeo]/value,/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=continent])/placename,
|
|
7 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/county,/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,
|
|
4 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=majorGeo]/value,/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=continent])/placename,
|
|
5 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/country,/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,
|
|
6 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/county,/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,
|
|
7 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/state,/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,
|
|
8 | 8 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy, |
9 | 9 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT,/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc, |
10 | 10 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=localityDescription]/value,/*_id/locationevent/*_id/location/locationnarrative, |
mappings/DwC.self.specimens.csv | ||
---|---|---|
1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/" |
2 | 2 |
Country,Country |
3 | 3 |
country,country |
4 |
County,County |
|
5 |
county,county |
|
4 | 6 |
StateProvince,StateProvince |
5 | 7 |
stateProvince,stateProvince |
6 |
County,County |
|
7 |
county,county |
|
8 | 8 |
CoordinatePrecision,CoordinatePrecision |
9 | 9 |
coordinatePrecision,coordinatePrecision |
10 | 10 |
BoundingBox,BoundingBox |
mappings/DwC2.ci-VegBIEN.specimens.csv | ||
---|---|---|
1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order |
2 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
3 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
4 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
5 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
6 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
7 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
2 |
Country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
3 |
country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
4 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
5 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
6 |
StateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
7 |
stateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
8 | 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
9 | 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
10 | 10 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
mappings/DwC2-VegBIEN.specimens.csv | ||
---|---|---|
1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order |
2 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
3 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
4 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
2 |
country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
3 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
4 |
stateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
5 | 5 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
6 | 6 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
7 | 7 |
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
mappings/for_review/VegX-VegBIEN.plots.csv | ||
---|---|---|
1 | 1 |
VegX:/*s/plotObservation,VegBIEN:/locationevent,Comments |
2 | 2 |
//plot/area,//location/area, |
3 | 3 |
//geospatial/verbatimElevation,//location/elevation/_alt/1, |
4 |
//plot/country,"//*_id/namedplace[placesystem=""area|country|territory""]/placename",
|
|
5 |
//plot/state,"//*_id/namedplace[placesystem=""region|state|province""]/placename",
|
|
6 |
//plot/simpleUserdefined[name=majorGeo]/value,//*_id/namedplace[placesystem=continent]/placename,
|
|
7 |
//plot/county,//*_id/namedplace[placesystem=county]/placename,
|
|
4 |
//plot/simpleUserdefined[name=majorGeo]/value,//*_id/namedplace[rank=continent]/placename,
|
|
5 |
//plot/country,//*_id/namedplace[rank=country]/placename,
|
|
6 |
//plot/county,//*_id/namedplace[rank=county]/placename,
|
|
7 |
//plot/state,//*_id/namedplace[rank=stateProvince]/placename,
|
|
8 | 8 |
//geospatial/CoordinateUncertaintyInMeters,//location/locationdetermination[]/coordsaccuracy, |
9 | 9 |
//geospatial/FootprintWKT,//location/locationdetermination[]/footprintgeometry_dwc, |
10 | 10 |
//plot/simpleUserdefined[name=localityDescription]/value,//location/locationnarrative, |
mappings/for_review/VegX-VegBIEN.organisms.csv | ||
---|---|---|
1 | 1 |
VegX:/*s/individualOrganismObservation,VegBIEN:/taxonoccurrence,Comments |
2 | 2 |
//plot/area,//location/area, |
3 | 3 |
//geospatial/verbatimElevation,//location/elevation/_alt/1, |
4 |
//plot/country,"//*_id/namedplace[placesystem=""area|country|territory""]/placename",
|
|
5 |
//plot/state,"//*_id/namedplace[placesystem=""region|state|province""]/placename",
|
|
6 |
//plot/simpleUserdefined[name=majorGeo]/value,//*_id/namedplace[placesystem=continent]/placename,
|
|
7 |
//plot/county,//*_id/namedplace[placesystem=county]/placename,
|
|
4 |
//plot/simpleUserdefined[name=majorGeo]/value,//*_id/namedplace[rank=continent]/placename,
|
|
5 |
//plot/country,//*_id/namedplace[rank=country]/placename,
|
|
6 |
//plot/county,//*_id/namedplace[rank=county]/placename,
|
|
7 |
//plot/state,//*_id/namedplace[rank=stateProvince]/placename,
|
|
8 | 8 |
//geospatial/CoordinateUncertaintyInMeters,//location/locationdetermination[]/coordsaccuracy, |
9 | 9 |
//geospatial/FootprintWKT,//location/locationdetermination[]/footprintgeometry_dwc, |
10 | 10 |
//plot/simpleUserdefined[name=localityDescription]/value,//location/locationnarrative, |
mappings/for_review/DwC2-VegBIEN.specimens.csv | ||
---|---|---|
1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order |
2 |
country,"//*_id/namedplace[placesystem=""area|country|territory""]/placename",Brad: Required; reject record if this field NULL,63
|
|
3 |
stateProvince,"//*_id/namedplace[placesystem=""region|state|province""]/placename",,65
|
|
4 |
county,//*_id/namedplace[placesystem=county]/placename,,66
|
|
2 |
country,//*_id/namedplace[rank=country]/placename,Brad: Required; reject record if this field NULL,63
|
|
3 |
county,//*_id/namedplace[rank=county]/placename,,66
|
|
4 |
stateProvince,//*_id/namedplace[rank=stateProvince]/placename,,65
|
|
5 | 5 |
coordinatePrecision,//location/locationdetermination[]/coordsaccuracy/_noCV/value,,89 |
6 | 6 |
footprintWKT,//location/locationdetermination[]/footprintgeometry_dwc,,91 |
7 | 7 |
locality,//location/locationnarrative/_merge/1,,68 |
mappings/DwC-VegBIEN.specimens.csv | ||
---|---|---|
1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order |
2 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
3 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
|
|
4 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
5 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
|
|
6 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
7 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
|
|
2 |
Country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
3 |
country,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=country])/placename,Brad: Required; reject record if this field NULL,63
|
|
4 |
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
5 |
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=county])/placename,,66
|
|
6 |
StateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
7 |
stateProvince,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[rank=stateProvince])/placename,,65
|
|
8 | 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
9 | 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
10 | 10 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
Also available in: Unified diff
VegBIEN mappings: Map namedplaces using new rank field