Revision 1323
Added by Aaron Marcuse-Kubitza almost 13 years ago
| inputs/NYBG/test/import.specimens.out.ref | ||
|---|---|---|
| 1 |
Inserted 58 new rows into database |
|
| 1 |
Inserted 56 new rows into database |
|
| inputs/NYBG/test/VegBIEN.specimens.xml.ref | ||
|---|---|---|
| 26 | 26 |
<placename>Manú</placename> |
| 27 | 27 |
</namedplace> |
| 28 | 28 |
</namedplace_id> |
| 29 |
<latitude>-11.80000000</latitude> |
|
| 30 |
<longitude>-71.40000000</longitude> |
|
| 29 | 31 |
</locationdetermination> |
| 30 | 32 |
<locationnarrative>Parque Nacional del Manu. Río Manu: Cocha Casha Station; habitat: Floodplain forest</locationnarrative> |
| 31 | 33 |
<elevation>350.0</elevation> |
| 32 | 34 |
<elevationrange>0.0</elevationrange> |
| 33 |
<locationdetermination> |
|
| 34 |
<latitude>-11.80000000</latitude> |
|
| 35 |
<longitude>-71.40000000</longitude> |
|
| 36 |
</locationdetermination> |
|
| 37 | 35 |
<centerlatitude>-11.80000000</centerlatitude> |
| 38 | 36 |
<centerlongitude>-71.40000000</centerlongitude> |
| 39 | 37 |
</location> |
| ... | ... | |
| 183 | 181 |
<placename>Belize District</placename> |
| 184 | 182 |
</namedplace> |
| 185 | 183 |
</namedplace_id> |
| 184 |
<latitude>17.40000000</latitude> |
|
| 185 |
<longitude>-88.50000000</longitude> |
|
| 186 | 186 |
</locationdetermination> |
| 187 | 187 |
<locationnarrative>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</locationnarrative> |
| 188 | 188 |
<elevation>15.0</elevation> |
| 189 | 189 |
<elevationrange>0.0</elevationrange> |
| 190 |
<locationdetermination> |
|
| 191 |
<latitude>17.40000000</latitude> |
|
| 192 |
<longitude>-88.50000000</longitude> |
|
| 193 |
</locationdetermination> |
|
| 194 | 190 |
<centerlatitude>17.40000000</centerlatitude> |
| 195 | 191 |
<centerlongitude>-88.50000000</centerlongitude> |
| 196 | 192 |
</location> |
| inputs/NYBG/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 1 | 1 |
NYBG[DwC]:nybg_raw,VegBIEN:/specimenreplicate,Comments,Order |
| 2 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 3 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 4 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 5 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 6 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 2 | 7 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 3 | 8 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 4 | 9 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 5 | 10 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 6 | 11 |
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 7 | 12 |
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 10 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 11 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 12 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 13 | 13 |
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 14 | 14 |
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1/_merge/1,,68 |
| 15 | 15 |
Substrate,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1/_merge/2/_label[label=""substrate""]/value",,68 |
| ... | ... | |
| 24 | 24 |
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 25 | 25 |
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 26 | 26 |
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_nullIf:[null=.]/value",,71
|
| 27 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 28 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 29 |
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 30 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 31 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 32 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 33 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 34 |
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 35 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 36 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 27 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 28 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 29 |
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 30 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 31 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 32 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 33 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 34 |
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 35 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 36 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 37 | 37 |
EventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date,,44 |
| 38 | 38 |
eventDate/_alt,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44 |
| 39 | 39 |
DayCollected,"/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44 |
| inputs/SALVIAS/test/VegBIEN.plots.xml.ref | ||
|---|---|---|
| 18 | 18 |
<placename>Ecuador</placename> |
| 19 | 19 |
</namedplace> |
| 20 | 20 |
</namedplace_id> |
| 21 |
</locationdetermination> |
|
| 22 |
<locationdetermination> |
|
| 23 | 21 |
<latitude>-3.45</latitude> |
| 24 | 22 |
<longitude>-78.3667</longitude> |
| 25 | 23 |
</locationdetermination> |
| ... | ... | |
| 67 | 65 |
<placename>Germany</placename> |
| 68 | 66 |
</namedplace> |
| 69 | 67 |
</namedplace_id> |
| 70 |
</locationdetermination> |
|
| 71 |
<locationdetermination> |
|
| 72 | 68 |
<latitude>48.0667</latitude> |
| 73 | 69 |
<longitude>11.5</longitude> |
| 74 | 70 |
</locationdetermination> |
| inputs/SALVIAS/test/import.plots.out.ref | ||
|---|---|---|
| 1 |
Inserted 23 new rows into database |
|
| 1 |
Inserted 21 new rows into database |
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| inputs/SALVIAS/maps/VegBIEN.plots.csv | ||
|---|---|---|
| 10 | 10 |
slope_gradient,/*_id/location/slopegradient, |
| 11 | 11 |
elev_max_m,"/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",
|
| 12 | 12 |
elev_min_m,"/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",
|
| 13 |
LatDec,"/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}",
|
|
| 14 |
LongDec,"/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}",
|
|
| 13 |
LatDec,"/*_id/location/{locationdetermination/latitude,centerlatitude}",
|
|
| 14 |
LongDec,"/*_id/location/{locationdetermination/longitude,centerlongitude}",
|
|
| 15 | 15 |
PlotMethod,/*_id/method/name, |
| 16 | 16 |
project_id,/*_id/project:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/projectname, |
| 17 | 17 |
life_zone_code,/commclass/commdetermination/*_id/commconcept/*_id/*/commname, |
| inputs/NYBG-CSV/test/import.specimens.out.ref | ||
|---|---|---|
| 1 |
Inserted 58 new rows into database |
|
| 1 |
Inserted 56 new rows into database |
|
| inputs/NYBG-CSV/test/VegBIEN.specimens.xml.ref | ||
|---|---|---|
| 26 | 26 |
<placename>Manú</placename> |
| 27 | 27 |
</namedplace> |
| 28 | 28 |
</namedplace_id> |
| 29 |
<latitude>-11.80</latitude> |
|
| 30 |
<longitude>-71.40</longitude> |
|
| 29 | 31 |
</locationdetermination> |
| 30 | 32 |
<locationnarrative>Parque Nacional del Manu. Río Manu: Cocha Casha Station; habitat: Floodplain forest</locationnarrative> |
| 31 | 33 |
<elevation>350.0</elevation> |
| 32 | 34 |
<elevationrange>0.0</elevationrange> |
| 33 |
<locationdetermination> |
|
| 34 |
<latitude>-11.80</latitude> |
|
| 35 |
<longitude>-71.40</longitude> |
|
| 36 |
</locationdetermination> |
|
| 37 | 35 |
<centerlatitude>-11.80</centerlatitude> |
| 38 | 36 |
<centerlongitude>-71.40</centerlongitude> |
| 39 | 37 |
</location> |
| ... | ... | |
| 183 | 181 |
<placename>Belize District</placename> |
| 184 | 182 |
</namedplace> |
| 185 | 183 |
</namedplace_id> |
| 184 |
<latitude>17.40</latitude> |
|
| 185 |
<longitude>-88.50</longitude> |
|
| 186 | 186 |
</locationdetermination> |
| 187 | 187 |
<locationnarrative>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</locationnarrative> |
| 188 | 188 |
<elevation>15.0</elevation> |
| 189 | 189 |
<elevationrange>0.0</elevationrange> |
| 190 |
<locationdetermination> |
|
| 191 |
<latitude>17.40</latitude> |
|
| 192 |
<longitude>-88.50</longitude> |
|
| 193 |
</locationdetermination> |
|
| 194 | 190 |
<centerlatitude>17.40</centerlatitude> |
| 195 | 191 |
<centerlongitude>-88.50</centerlongitude> |
| 196 | 192 |
</location> |
| inputs/NYBG-CSV/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 1 | 1 |
NYBG-CSV[DwC],VegBIEN:/specimenreplicate,Comments,Order |
| 2 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 3 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 4 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 5 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 6 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 2 | 7 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 3 | 8 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 4 | 9 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 5 | 10 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 6 | 11 |
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 7 | 12 |
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 10 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 11 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 12 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 13 | 13 |
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 14 | 14 |
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1/_merge/1,,68 |
| 15 | 15 |
Substrate,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1/_merge/2/_label[label=""substrate""]/value",,68 |
| ... | ... | |
| 24 | 24 |
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 25 | 25 |
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 26 | 26 |
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_nullIf:[null=.]/value",,71
|
| 27 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 28 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 29 |
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 30 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 31 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 32 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 33 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 34 |
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 35 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 36 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 27 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 28 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 29 |
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 30 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 31 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 32 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 33 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 34 |
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 35 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 36 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 37 | 37 |
EventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date,,44 |
| 38 | 38 |
eventDate/_alt,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44 |
| 39 | 39 |
DayCollected,"/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44 |
| inputs/UArizona/test/import.specimens.out.ref | ||
|---|---|---|
| 1 |
Inserted 70 new rows into database |
|
| 1 |
Inserted 68 new rows into database |
|
| inputs/UArizona/test/VegBIEN.specimens.xml.ref | ||
|---|---|---|
| 20 | 20 |
<placename>Guerrero</placename> |
| 21 | 21 |
</namedplace> |
| 22 | 22 |
</namedplace_id> |
| 23 |
</locationdetermination> |
|
| 24 |
<locationnarrative>Iguala, Hwy. 95, 4/10 mi. So. of La Cabana Motel. Dry valley.</locationnarrative> |
|
| 25 |
<locationdetermination> |
|
| 26 | 23 |
<latitude/> |
| 27 | 24 |
<longitude/> |
| 28 | 25 |
</locationdetermination> |
| 26 |
<locationnarrative>Iguala, Hwy. 95, 4/10 mi. So. of La Cabana Motel. Dry valley.</locationnarrative> |
|
| 29 | 27 |
<centerlatitude/> |
| 30 | 28 |
<centerlongitude/> |
| 31 | 29 |
</location> |
| ... | ... | |
| 170 | 168 |
<placename>Afghanistan</placename> |
| 171 | 169 |
</namedplace> |
| 172 | 170 |
</namedplace_id> |
| 173 |
</locationdetermination> |
|
| 174 |
<locationnarrative>Grown in University of Arizona (tucson, AZ) greenhouses from seeds provided by the USDA, Plant Introduction accession 220085. .</locationnarrative> |
|
| 175 |
<locationdetermination> |
|
| 176 | 171 |
<latitude/> |
| 177 | 172 |
<longitude/> |
| 178 | 173 |
</locationdetermination> |
| 174 |
<locationnarrative>Grown in University of Arizona (tucson, AZ) greenhouses from seeds provided by the USDA, Plant Introduction accession 220085. .</locationnarrative> |
|
| 179 | 175 |
<centerlatitude/> |
| 180 | 176 |
<centerlongitude/> |
| 181 | 177 |
</location> |
| inputs/UArizona/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 1 | 1 |
UArizona[DwC]:ariz_raw,VegBIEN:/specimenreplicate,Comments,Order |
| 2 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 3 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 4 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 5 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 6 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 2 | 7 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 3 | 8 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 4 | 9 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 5 | 10 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 6 | 11 |
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 7 | 12 |
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 10 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 11 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 12 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 13 | 13 |
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 14 | 14 |
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 15 | 15 |
VerbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69 |
| ... | ... | |
| 22 | 22 |
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 23 | 23 |
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 24 | 24 |
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 25 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 26 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 27 |
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 28 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 29 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 30 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 31 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 32 |
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 33 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 34 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 25 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 26 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 27 |
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 28 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 29 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 30 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 31 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 32 |
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 33 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 34 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 35 | 35 |
EventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date,,44 |
| 36 | 36 |
eventDate/_alt,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44 |
| 37 | 37 |
VerbatimCollectingDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/0,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44 |
| inputs/SALVIAS-CSV/test/VegBIEN.plots.xml.ref | ||
|---|---|---|
| 24 | 24 |
<placename>Loreto</placename> |
| 25 | 25 |
</namedplace> |
| 26 | 26 |
</namedplace_id> |
| 27 |
</locationdetermination> |
|
| 28 |
<locationnarrative>pre-Holocene; clay</locationnarrative> |
|
| 29 |
<locationdetermination> |
|
| 30 | 27 |
<latitude>-3.95</latitude> |
| 31 | 28 |
<longitude>-73.4333</longitude> |
| 32 | 29 |
</locationdetermination> |
| 30 |
<locationnarrative>pre-Holocene; clay</locationnarrative> |
|
| 33 | 31 |
<centerlatitude>-3.95</centerlatitude> |
| 34 | 32 |
<centerlongitude>-73.4333</centerlongitude> |
| 35 | 33 |
</location> |
| ... | ... | |
| 70 | 68 |
<placename>Loreto</placename> |
| 71 | 69 |
</namedplace> |
| 72 | 70 |
</namedplace_id> |
| 73 |
</locationdetermination> |
|
| 74 |
<locationnarrative>pre-Holocene; white and brown sand</locationnarrative> |
|
| 75 |
<locationdetermination> |
|
| 76 | 71 |
<latitude>-3.95</latitude> |
| 77 | 72 |
<longitude>-73.4333</longitude> |
| 78 | 73 |
</locationdetermination> |
| 74 |
<locationnarrative>pre-Holocene; white and brown sand</locationnarrative> |
|
| 79 | 75 |
<centerlatitude>-3.95</centerlatitude> |
| 80 | 76 |
<centerlongitude>-73.4333</centerlongitude> |
| 81 | 77 |
</location> |
| inputs/SALVIAS-CSV/test/import.plots.out.ref | ||
|---|---|---|
| 1 |
Inserted 12 new rows into database |
|
| 1 |
Inserted 10 new rows into database |
|
| inputs/SALVIAS-CSV/maps/VegBIEN.plots.csv | ||
|---|---|---|
| 10 | 10 |
slope_gradient,/*_id/location/slopegradient, |
| 11 | 11 |
elev_max_m,"/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",
|
| 12 | 12 |
elev_min_m,"/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",
|
| 13 |
lat_decimal,"/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}",
|
|
| 14 |
long_decimal,"/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}",
|
|
| 13 |
lat_decimal,"/*_id/location/{locationdetermination/latitude,centerlatitude}",
|
|
| 14 |
long_decimal,"/*_id/location/{locationdetermination/longitude,centerlongitude}",
|
|
| 15 | 15 |
plot_methodology,/*_id/method/name, |
| 16 | 16 |
project,/*_id/project:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/projectname, |
| 17 | 17 |
holdridge_life_zone,/commclass/commdetermination/*_id/commconcept/*_id/*/commname, |
| mappings/VegX-VegBIEN.plots.csv | ||
|---|---|---|
| 1 | 1 |
VegX:/*s/plotObservation,VegBIEN:/locationevent,Comments |
| 2 | 2 |
/*UniqueIdentifierID->/*s/plot/area,/*_id/location/area, |
| 3 | 3 |
/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation,/*_id/location/elevation/_alt/1, |
| 4 |
/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*_id/location/locationdetermination/coordsaccuracy, |
|
| 5 |
/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT,/*_id/location/locationdetermination/footprintgeometry_dwc, |
|
| 4 | 6 |
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=majorGeo]/value,"/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/parent_id/namedplace[rank=continent]/placename", |
| 5 | 7 |
/*UniqueIdentifierID->/*s/plot/country,"/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename", |
| 6 | 8 |
/*UniqueIdentifierID->/*s/plot/state,"/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename", |
| 7 | 9 |
/*UniqueIdentifierID->/*s/plot/county,"/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename", |
| 8 |
/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy, |
|
| 9 |
/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT,/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc, |
|
| 10 | 10 |
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=localityDescription]/value,/*_id/location/locationnarrative, |
| 11 | 11 |
/*UniqueIdentifierID->/*s/plot/slopeAspect,/*_id/location/slopeaspect, |
| 12 | 12 |
/*UniqueIdentifierID->/*s/plot/slopeGradient,/*_id/location/slopegradient, |
| 13 | 13 |
/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters,"/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",
|
| 14 | 14 |
/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters,"/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",
|
| 15 |
/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude,"/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}",
|
|
| 16 |
/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLongitude,"/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}",
|
|
| 15 |
/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude,"/*_id/location/{locationdetermination/latitude,centerlatitude}",
|
|
| 16 |
/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLongitude,"/*_id/location/{locationdetermination/longitude,centerlongitude}",
|
|
| 17 | 17 |
/simpleUserdefined[name=plotMethodology]/value,/*_id/method/name, |
| 18 | 18 |
/*ID->/*s/project/personnel[role=metadataProvider]/organizationName,/*_id/project:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1, |
| 19 | 19 |
/*ID->/*s/project:[personnel[role=metadataProvider]/organizationName=$/_ignore/inLabel]/title,/*_id/project:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/projectname, |
| mappings/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 1 | 1 |
VegX:/*s/individualOrganismObservation,VegBIEN:/taxonoccurrence,Comments |
| 2 | 2 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/area,/*_id/locationevent/*_id/location/area, |
| 3 | 3 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation,/*_id/locationevent/*_id/location/elevation/_alt/1, |
| 4 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy, |
|
| 5 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT,/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc, |
|
| 4 | 6 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=majorGeo]/value,"/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/parent_id/namedplace[rank=continent]/placename", |
| 5 | 7 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/country,"/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename", |
| 6 | 8 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/state,"/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename", |
| 7 | 9 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/county,"/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename", |
| 8 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy, |
|
| 9 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT,/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc, |
|
| 10 | 10 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=localityDescription]/value,/*_id/locationevent/*_id/location/locationnarrative, |
| 11 | 11 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeAspect,/*_id/locationevent/*_id/location/slopeaspect, |
| 12 | 12 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeGradient,/*_id/locationevent/*_id/location/slopegradient, |
| 13 | 13 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",
|
| 14 | 14 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",
|
| 15 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude,"/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}",
|
|
| 16 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLongitude,"/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}",
|
|
| 15 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude,"/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}",
|
|
| 16 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLongitude,"/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}",
|
|
| 17 | 17 |
/*ID->/*s/plotObservation/simpleUserdefined[name=plotMethodology]/value,/*_id/locationevent/*_id/method/name, |
| 18 | 18 |
/*ID->/*s/plotObservation/*ID->/*s/project/personnel[role=metadataProvider]/organizationName,/*_id/locationevent/*_id/project:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1, |
| 19 | 19 |
/*ID->/*s/plotObservation/*ID->/*s/project:[personnel[role=metadataProvider]/organizationName=$/_ignore/inLabel]/title,/*_id/locationevent/*_id/project:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/projectname, |
| mappings/DwC.self.specimens.csv | ||
|---|---|---|
| 1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/" |
| 2 |
CoordinatePrecision,CoordinatePrecision |
|
| 3 |
coordinatePrecision,coordinatePrecision |
|
| 4 |
BoundingBox,BoundingBox |
|
| 5 |
FootprintWKT,FootprintWKT |
|
| 6 |
footprintWKT,footprintWKT |
|
| 2 | 7 |
Country,Country |
| 3 | 8 |
country,country |
| 4 | 9 |
StateProvince,StateProvince |
| 5 | 10 |
stateProvince,stateProvince |
| 6 | 11 |
County,County |
| 7 | 12 |
county,county |
| 8 |
CoordinatePrecision,CoordinatePrecision |
|
| 9 |
coordinatePrecision,coordinatePrecision |
|
| 10 |
BoundingBox,BoundingBox |
|
| 11 |
FootprintWKT,FootprintWKT |
|
| 12 |
footprintWKT,footprintWKT |
|
| 13 | 13 |
Locality,Locality |
| 14 | 14 |
locality,locality |
| 15 | 15 |
VerbatimLocality,VerbatimLocality |
| mappings/DwC2.ci-VegBIEN.specimens.csv | ||
|---|---|---|
| 1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order |
| 2 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 3 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 4 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 5 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 2 | 6 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 3 | 7 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 4 | 8 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 5 | 9 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 6 | 10 |
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 7 | 11 |
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 10 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 11 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 12 | 12 |
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 13 | 13 |
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 14 | 14 |
VerbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69 |
| ... | ... | |
| 19 | 19 |
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
|
| 20 | 20 |
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 21 | 21 |
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 22 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 23 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 24 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 25 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 26 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 27 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 28 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 29 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 22 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 23 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 24 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 25 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 26 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 27 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 28 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 29 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 30 | 30 |
EventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date,,44 |
| 31 | 31 |
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date,,44 |
| 32 | 32 |
MaximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75 |
| mappings/DwC2-VegBIEN.specimens.csv | ||
|---|---|---|
| 1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order |
| 2 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 3 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 2 | 4 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 3 | 5 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 4 | 6 |
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 5 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 6 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 7 | 7 |
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 8 | 8 |
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69 |
| 9 | 9 |
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52 |
| 10 | 10 |
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
|
| 11 | 11 |
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 12 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 13 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 14 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 15 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 12 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 13 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 14 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 15 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 16 | 16 |
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date,,44 |
| 17 | 17 |
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75 |
| 18 | 18 |
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74 |
| mappings/for_review/VegX-VegBIEN.plots.csv | ||
|---|---|---|
| 1 | 1 |
VegX:/*s/plotObservation,VegBIEN:/locationevent,Comments |
| 2 | 2 |
//plot/area,//location/area, |
| 3 | 3 |
//geospatial/verbatimElevation,//location/elevation/_alt/1, |
| 4 |
//geospatial/CoordinateUncertaintyInMeters,//locationdetermination/coordsaccuracy, |
|
| 5 |
//geospatial/FootprintWKT,//locationdetermination/footprintgeometry_dwc, |
|
| 4 | 6 |
//plot/simpleUserdefined[name=majorGeo]/value,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/parent_id/namedplace[rank=continent]/placename, |
| 5 | 7 |
//plot/country,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename, |
| 6 | 8 |
//plot/state,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename, |
| 7 | 9 |
//plot/county,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/placename, |
| 8 |
//geospatial/CoordinateUncertaintyInMeters,//location/locationdetermination[]/coordsaccuracy, |
|
| 9 |
//geospatial/FootprintWKT,//location/locationdetermination[]/footprintgeometry_dwc, |
|
| 10 | 10 |
//plot/simpleUserdefined[name=localityDescription]/value,//location/locationnarrative, |
| 11 | 11 |
//plot/slopeAspect,//location/slopeaspect, |
| 12 | 12 |
//plot/slopeGradient,//location/slopegradient, |
| 13 | 13 |
//geospatial/maximumElevationInMeters,"/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",
|
| 14 | 14 |
//geospatial/minimumElevationInMeters,"/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",
|
| 15 |
//geospatial/DecimalLatitude,"/*_id/location/{locationdetermination[]/latitude,centerlatitude}",
|
|
| 16 |
//geospatial/DecimalLongitude,"/*_id/location/{locationdetermination[]/longitude,centerlongitude}",
|
|
| 15 |
//geospatial/DecimalLatitude,"/*_id/location/{locationdetermination/latitude,centerlatitude}",
|
|
| 16 |
//geospatial/DecimalLongitude,"/*_id/location/{locationdetermination/longitude,centerlongitude}",
|
|
| 17 | 17 |
/simpleUserdefined[name=plotMethodology]/value,//method/name, |
| 18 | 18 |
//project/personnel[role=metadataProvider]/organizationName,//party/organizationname/_alt/1, |
| 19 | 19 |
//*s/project:[personnel[role=metadataProvider]/organizationName=$/_ignore/inLabel]/title,//project/projectname, |
| mappings/for_review/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 1 | 1 |
VegX:/*s/individualOrganismObservation,VegBIEN:/taxonoccurrence,Comments |
| 2 | 2 |
//plot/area,//location/area, |
| 3 | 3 |
//geospatial/verbatimElevation,//location/elevation/_alt/1, |
| 4 |
//geospatial/CoordinateUncertaintyInMeters,//locationdetermination/coordsaccuracy, |
|
| 5 |
//geospatial/FootprintWKT,//locationdetermination/footprintgeometry_dwc, |
|
| 4 | 6 |
//plot/simpleUserdefined[name=majorGeo]/value,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/parent_id/namedplace[rank=continent]/placename, |
| 5 | 7 |
//plot/country,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename, |
| 6 | 8 |
//plot/state,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename, |
| 7 | 9 |
//plot/county,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/placename, |
| 8 |
//geospatial/CoordinateUncertaintyInMeters,//location/locationdetermination[]/coordsaccuracy, |
|
| 9 |
//geospatial/FootprintWKT,//location/locationdetermination[]/footprintgeometry_dwc, |
|
| 10 | 10 |
//plot/simpleUserdefined[name=localityDescription]/value,//location/locationnarrative, |
| 11 | 11 |
//plot/slopeAspect,//location/slopeaspect, |
| 12 | 12 |
//plot/slopeGradient,//location/slopegradient, |
| 13 | 13 |
//geospatial/maximumElevationInMeters,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",
|
| 14 | 14 |
//geospatial/minimumElevationInMeters,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",
|
| 15 |
//geospatial/DecimalLatitude,"/*_id/locationevent/*_id/location/{locationdetermination[]/latitude,centerlatitude}",
|
|
| 16 |
//geospatial/DecimalLongitude,"/*_id/locationevent/*_id/location/{locationdetermination[]/longitude,centerlongitude}",
|
|
| 15 |
//geospatial/DecimalLatitude,"/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}",
|
|
| 16 |
//geospatial/DecimalLongitude,"/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}",
|
|
| 17 | 17 |
//plotObservation/simpleUserdefined[name=plotMethodology]/value,//method/name, |
| 18 | 18 |
//project/personnel[role=metadataProvider]/organizationName,//party/organizationname/_alt/1, |
| 19 | 19 |
//*s/project:[personnel[role=metadataProvider]/organizationName=$/_ignore/inLabel]/title,//project/projectname, |
| mappings/for_review/DwC2-VegBIEN.specimens.csv | ||
|---|---|---|
| 1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order |
| 2 |
coordinatePrecision,//locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 3 |
footprintWKT,//locationdetermination/footprintgeometry_dwc,,91 |
|
| 2 | 4 |
country,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename,Brad: Required; reject record if this field NULL,63 |
| 3 | 5 |
stateProvince,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename,,65 |
| 4 | 6 |
county,//locationdetermination/namedplace_id/_simplifyPath/path/namedplace[rank=county]/placename,,66 |
| 5 |
coordinatePrecision,//location/locationdetermination[]/coordsaccuracy/_noCV/value,,89 |
|
| 6 |
footprintWKT,//location/locationdetermination[]/footprintgeometry_dwc,,91 |
|
| 7 | 7 |
locality,//location/locationnarrative/_merge/1,,68 |
| 8 | 8 |
verbatimLocality,//location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69 |
| 9 | 9 |
habitat,"//location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52 |
| 10 | 10 |
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
|
| 11 | 11 |
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 12 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/latitude,centerlatitude}/_alt/1/_nullIf/value",,85
|
|
| 13 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/latitude,centerlatitude}/_alt/2/_nullIf/value",,81
|
|
| 14 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/longitude,centerlongitude}/_alt/1/_nullIf/value",,86
|
|
| 15 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/longitude,centerlongitude}/_alt/2/_nullIf/value",,82
|
|
| 12 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf/value",,85
|
|
| 13 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf/value",,81
|
|
| 14 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf/value",,86
|
|
| 15 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf/value",,82
|
|
| 16 | 16 |
eventDate,//locationevent/obsstartdate/_*/date,,44 |
| 17 | 17 |
maximumDepthInMeters,//locationevent/waterdepth/_avg/max,,75 |
| 18 | 18 |
minimumDepthInMeters,//locationevent/waterdepth/_avg/min,,74 |
| mappings/DwC-VegBIEN.specimens.csv | ||
|---|---|---|
| 1 | 1 |
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order |
| 2 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 3 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value,,89 |
|
| 4 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 5 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 6 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91 |
|
| 2 | 7 |
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 3 | 8 |
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/parent_id/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63 |
| 4 | 9 |
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 5 | 10 |
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/parent_id/namedplace[rank=stateProvince]/placename",,65 |
| 6 | 11 |
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 7 | 12 |
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/namedplace[rank=county]/placename",,66 |
| 8 |
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 9 |
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89 |
|
| 10 |
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 11 |
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 12 |
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91 |
|
| 13 | 13 |
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 14 | 14 |
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68 |
| 15 | 15 |
VerbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69 |
| ... | ... | |
| 22 | 22 |
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 23 | 23 |
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 24 | 24 |
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
| 25 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 26 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 27 |
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 28 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 29 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 30 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 31 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 32 |
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 33 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 34 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 25 |
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 26 |
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
|
|
| 27 |
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 28 |
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 29 |
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
|
|
| 30 |
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 31 |
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
|
|
| 32 |
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 33 |
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 34 |
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
|
|
| 35 | 35 |
EventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date,,44 |
| 36 | 36 |
eventDate/_alt,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44 |
| 37 | 37 |
DayCollected,"/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44 |
Also available in: Unified diff
VegBIEN mappings: lat/long locationdetermination: Removed [!namedplace_id] key so that it's merged into the namedplace locationdetermination