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| Revision:
Name Size Revision Age Author Comment
  IndividualObservation 12886 over 10 years Aaron Marcuse-Kubitza schemas/vegbien.sql: specimenreplicate.institut...
  Location 11396 about 11 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  LocationObservation 11999 almost 11 years Aaron Marcuse-Kubitza fix: inputs/SALVIAS/plotMetadata_/map.csv, inpu...
  Source 11396 about 11 years Aaron Marcuse-Kubitza fix: bin/map: put template: comment out the "Pu...
  _archive 7587 almost 12 years Aaron Marcuse-Kubitza Added inputs/Madidi/_archive/2010-1-2/madidi_pl...
  _src 13195 over 10 years Aaron Marcuse-Kubitza inputs/Madidi/_src/: set svn:ignore
  logs 8801 over 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: SVN: add, %/add: */logs:...
  verify 12018 almost 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: add!: verify/: also svn:...
Makefile 27 Bytes 10177 over 11 years Aaron Marcuse-Kubitza inputs/*/: added top-level Makefile which inclu...
_README.TXT 365 Bytes 7223 almost 12 years Aaron Marcuse-Kubitza Added inputs/Madidi/_README.TXT
import_order.txt 58 Bytes 7217 almost 12 years Aaron Marcuse-Kubitza inputs/Madidi/: Refreshed. Note that new export...
map.csv 6.01 KB 11999 almost 11 years Aaron Marcuse-Kubitza fix: inputs/SALVIAS/plotMetadata_/map.csv, inpu...
new_terms.csv 2.42 KB 11788 almost 11 years Aaron Marcuse-Kubitza **/new_terms.csv, unmapped_terms.csv updated (u...
run 87 Bytes 10301 over 11 years Aaron Marcuse-Kubitza inputs/Madidi/: switched to new-style import
table.run 81 Bytes 10179 over 11 years Aaron Marcuse-Kubitza inputs/*/: added table.run for use by the table...
unmapped_terms.csv 926 Bytes 11788 almost 11 years Aaron Marcuse-Kubitza **/new_terms.csv, unmapped_terms.csv updated (u...
  • svn:ignore: *

Latest revisions

# Date Author Comment
13195 04/19/2014 10:14 PM Aaron Marcuse-Kubitza

inputs/Madidi/_src/: set svn:ignore

13055 04/04/2014 06:13 PM Aaron Marcuse-Kubitza

added inputs/Madidi/_src/ to match wiki steps in wiki.vegpath.org/Adding_a_flat-file_datasource

12886 03/24/2014 05:35 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: specimenreplicate.institution_id: renamed to duplicate_institutions_sourcelist_id, as decided in the conference calls (wiki.vegpath.org/2014-03-13_conference_call#schema-changes-2)

12879 03/24/2014 01:49 AM Aaron Marcuse-Kubitza

mappings/VegCore.htm: regenerated from wiki: rename specimenHolderInstitutions to specimen_duplicate_institutions, as decided in the 2014-03-13 conference call (wiki.vegpath.org/2014-03-13_conference_call#schema-changes-2). note that most schema changes (such as this one) involve mappings changes, which are handled automatically by `inputs/run postprocess; yes|make inputs/{NVS,SALVIAS,TEAM}/test`.

12018 02/02/2014 12:49 AM Aaron Marcuse-Kubitza

inputs/input.Makefile: add!: verify/: also svn:ignore *.tsv, *.txt

11999 01/23/2014 12:54 AM Aaron Marcuse-Kubitza

fix: inputs/SALVIAS/plotMetadata_/map.csv, inputs/Madidi/LocationObservation/map.csv: things mapped to communityID: remapped to communityName, which is what's used in analytical_stem (communityID is for numeric IDs)

11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).

11788 11/26/2013 11:11 PM Aaron Marcuse-Kubitza

**/new_terms.csv, unmapped_terms.csv updated (using `make missing_mappings`)

11396 10/21/2013 07:14 PM Aaron Marcuse-Kubitza

fix: bin/map: put template: comment out the "Put template:" label so that the output is valid XML, and displays properly in a browser rather than showing a syntax error

11107 09/29/2013 08:58 PM Aaron Marcuse-Kubitza

bugfix: mappings/VegCore-VegBIEN.csv: nest all taxonoccurrences inside a stratum event, so that the parent locationevent is always fully populated before child locationevents point to it. (previously, a stub parent event was created when the child event was imported first, which blocked the fully-populated parent event from being inserted later on.) this uses auto-folding (for VegBank/CVS) and auto-forwarding (for other datasources) to prune empty stratum events for taxonoccurrences that don't have strata. (see wiki.vegpath.org/Auto-folding, wiki.vegpath.org/Auto-forwarding for more info about these normalization techniques.) note that the inserted row counts stay exactly the same for all datasources except VegBank (which was being fixed), indicating that this signficant change to the mappings did not change the semantics of the import of taxonoccurrences.

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