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root/trunk @ 13440

Name Size Revision Age Author Comment
  BIEN2 12779 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  _archive 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 13400 about 10 years Aaron Marcuse-Kubitza added validation/aggregating/plots/VegBank/bien...
  backups 13294 about 10 years Aaron Marcuse-Kubitza backups/mysql_snapshot: documented initial vegb...
  bin 13309 about 10 years Aaron Marcuse-Kubitza bin/in_place: diff: use --brief to avoid scanni...
  config 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  derived 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  exports 13330 about 10 years Aaron Marcuse-Kubitza bugfix: exports/.rsync_filter.upload: *.csv: ne...
  inputs 13439 about 10 years Aaron Marcuse-Kubitza fix: inputs/.TNRS/schema.sql: taxon_scrub, etc....
  issues 12124 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 13436 about 10 years Aaron Marcuse-Kubitza lib/tnrs.py: retrieval_request_template: taxono...
  mappings 13115 about 10 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: mapped subspecies...
  planning 13396 about 10 years Aaron Marcuse-Kubitza planning/meetings/BIEN conference call availabi...
  schemas 13440 about 10 years Aaron Marcuse-Kubitza bugfix: schemas/public_.sql: _plots_20_tnrs_nam...
  validation 13434 about 10 years Aaron Marcuse-Kubitza validation/aggregating/plots/bien3_validations_...
  web 13407 about 10 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
  wiki 12124 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
.htaccess 326 Bytes 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.18 KB 12124 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
Makefile 13.3 KB 13419 about 10 years Aaron Marcuse-Kubitza bugfix: /Makefile: install: use schemas/public/...
README.TXT 33 KB 13429 about 10 years Aaron Marcuse-Kubitza /README.TXT: Full database import: for test imp...
fix_perms 97 Bytes 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 518 Bytes 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
unmapped_terms.csv 33 KB 11970 over 10 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
13440 05/13/2014 03:28 AM Aaron Marcuse-Kubitza

bugfix: schemas/public_.sql: _plots_20_tnrs_names: morphospeciesSuffix must still be called morphospecies_suffix, not taxon_morphospecies, because that column has not been updated to the taxon_morphospecies yet (fixes r13435)
13439 05/13/2014 03:13 AM Aaron Marcuse-Kubitza

fix: inputs/.TNRS/schema.sql: taxon_scrub, etc.: scrubbed_*: use columns from MatchedTaxon whenever possible, to as much as possible avoid the need to join to taxon_scrub.scrubbed_unique_taxon_name.*
13438 05/13/2014 02:53 AM Aaron Marcuse-Kubitza

schemas/Makefile: vegbien.sql: exclude the same set of Source tables excluded by inputs/.TNRS/schema.sql, so that reinstalling TNRS doesn't change the contents of this file
13437 05/13/2014 02:29 AM Aaron Marcuse-Kubitza

bugfix: inputs/.TNRS/grants.sql: added GRANT statements from schema.sql because these aren't run by `make inputs/.TNRS/reinstall`
13436 05/12/2014 07:06 PM Aaron Marcuse-Kubitza

lib/tnrs.py: retrieval_request_template: taxonomic_constraint, source_sorting: documented their meaning and why they need to be on/off
13435 05/12/2014 04:28 PM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_names: changed to set of columns requested by Martha
13434 05/10/2014 09:32 PM Aaron Marcuse-Kubitza

validation/aggregating/plots/bien3_validations_salvias_vegbien.sql: updated to DB
13433 05/10/2014 09:17 PM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_names: added morphospecies suffix in order to also validate it
13432 05/10/2014 09:13 PM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_names: added verbatim name in order to also validate the formation of the concatenated name
13431 05/10/2014 08:49 PM Aaron Marcuse-Kubitza

schemas/public_.sql: merged _plots_20_tnrs_input_names, _plots_21_tnrs_output_names into _plots_20_tnrs_names so the input and output names can be compared side-by-side

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