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Name Size Revision Age Author Comment
  .NCBI 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  .TNRS 13508 over 10 years Aaron Marcuse-Kubitza fix: inputs/.TNRS/schema.sql: MatchedTaxon.taxo...
  .archive 11717 about 11 years Aaron Marcuse-Kubitza inputs/: removed SALVIAS-CSV, because this is a...
  .geoscrub 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  .herbaria 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  ACAD 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  ARIZ 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  BRIT 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  CTFS 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  CVS 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  FIA 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  GBIF 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  HIBG 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  HVAA 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  IRMNG 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  IUCN 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  JBM 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  MO 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  MT 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  Madidi 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  NCU 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  NVS 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  NY 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  QFA 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  REMIB 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  SALVIAS 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  SpeciesLink 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TEAM 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TEX 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TRT 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TRTE 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TurboVeg 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  U 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  UBC 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  UNCC 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  VASCAN 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  VegBIEN 12112 almost 11 years Aaron Marcuse-Kubitza fix: inputs/VegBIEN/Redmine/wiki/.htaccess: red...
  VegBank 13402 over 10 years Aaron Marcuse-Kubitza added inputs/VegBank/verify/outputBien.log.url
  WIN 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  XAL 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  analytical_db 13417 over 10 years Aaron Marcuse-Kubitza bugfix: inputs/analytical_db/: need dummy table...
  bien2_traits 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  bien_web 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  newWorld 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  test_taxonomic_names 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
.htaccess 334 Bytes 8513 over 11 years Aaron Marcuse-Kubitza added .htaccess files for inputs/, schemas/ bec...
.rsync_filter.download 18 Bytes 10043 over 11 years Aaron Marcuse-Kubitza inputs/.rsync_ignore: test*.xml: turn on syncin...
.rsync_filter.starscream.download 24 Bytes 10039 over 11 years Aaron Marcuse-Kubitza inputs/.rsync_ignore: install.log.sql: only exc...
.rsync_filter.starscream.upload 24 Bytes 10039 over 11 years Aaron Marcuse-Kubitza inputs/.rsync_ignore: install.log.sql: only exc...
.rsync_filter.vegbiendev.upload 18 Bytes 10067 over 11 years Aaron Marcuse-Kubitza inputs/: don't upload test*.xml to jupiter on v...
BIEN2.datasources.xlsx 14.8 KB 3607 over 12 years Aaron Marcuse-Kubitza Added inputs/BIEN2.datasources.xlsx (formerly b...
Makefile 540 Bytes 10026 over 11 years Aaron Marcuse-Kubitza inputs/Makefile: download-logs: use bin/sync_up...
datasource_release_status.xlsx 33 Bytes 11942 almost 11 years Aaron Marcuse-Kubitza inputs/datasource_release_status.xlsx: renamed ...
import.stats.xls 1.2 MB 12158 almost 11 years Aaron Marcuse-Kubitza inputs/import.stats.xls: updated import times
input.Makefile 19.5 KB 13418 over 10 years Aaron Marcuse-Kubitza bugfix: inputs/input.Makefile: $(datasrc_schema...
publishable datasources.xlsx 6.06 KB 12005 almost 11 years Aaron Marcuse-Kubitza inputs/publishable datasources.xlsx: updated
publishable datasources.xlsx.url 88 Bytes 11942 almost 11 years Aaron Marcuse-Kubitza inputs/datasource_release_status.xlsx: renamed ...
run 207 Bytes 12891 over 10 years Aaron Marcuse-Kubitza inputs/run: postprocess(): documented runtime o...
  • svn:ignore: .~*

Latest revisions

# Date Author Comment
13508 05/21/2014 04:25 PM Aaron Marcuse-Kubitza

fix: inputs/.TNRS/schema.sql: MatchedTaxon.taxonomicStatus: filter using map_taxonomic_status() so that the corrected value is available in the normalized DB, not just analytical_stem

13507 05/21/2014 04:05 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: MatchedTaxon: to modify: use new MatchedTaxon_modify(), which eliminates the work of putting together the dependent views

13506 05/21/2014 03:53 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: added MatchedTaxon_modify()

13503 05/21/2014 04:13 AM Aaron Marcuse-Kubitza

bugfix: inputs/.TNRS/schema.sql: map_taxonomic_status(): need to use accepted name instead of scrubbed name (which also includes no-opinion names), as described at http://wiki.vegpath.org/2013-11-14_conference_call#taxonomic-fields. this used to be the accepted name, but got switched when the concatenated name was also used to store the matched name for no-opinion names.

13501 05/21/2014 01:27 AM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: MatchedTaxon: documented how to modify it (using util.force_recreate())

13498 05/20/2014 05:46 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: MatchedTaxon, etc.: added accepted_morphospecies_binomial derived field

13444 05/13/2014 04:50 AM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: MatchedTaxon.Accepted_name_species: mapped to accepted_species_binomial

13443 05/13/2014 04:09 AM Aaron Marcuse-Kubitza

fix: inputs/.TNRS/schema.sql: COMMENTs: always include newline before and after

13441 05/13/2014 03:46 AM Aaron Marcuse-Kubitza

bugfix: inputs/.TNRS/schema.sql: taxon_scrub, etc.: undid rename of accepted name columns to scrubbed_* (r13435), because these are actually not the same (scrubbed_* is the combination of accepted and no-opinion names). the accepted name columns will now be named accepted_*, following the standard naming scheme.

13439 05/13/2014 03:13 AM Aaron Marcuse-Kubitza

fix: inputs/.TNRS/schema.sql: taxon_scrub, etc.: scrubbed_*: use columns from MatchedTaxon whenever possible, to as much as possible avoid the need to join to taxon_scrub.scrubbed_unique_taxon_name.*

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