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1 1267 aaronmk
UArizona[DwC]:ariz_raw,VegBIEN:/specimenreplicate,Comments,Order
2 1356 aaronmk
CoordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
3
coordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
4
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
5
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
6 1323 aaronmk
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
7
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
8
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
9 1351 aaronmk
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
10
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
11 1353 aaronmk
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
12
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
13
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
14
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
15 1275 aaronmk
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
16 1267 aaronmk
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
17 1270 aaronmk
VerbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
18 1267 aaronmk
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
19 1270 aaronmk
Habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
20 1267 aaronmk
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
21
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
22 1270 aaronmk
MaximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
23 1267 aaronmk
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
24
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
25 1270 aaronmk
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
26 1267 aaronmk
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
27 1323 aaronmk
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
28
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
29
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
30
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
31
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
32
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
33
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
34
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
35
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
36
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
37 1310 aaronmk
EventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date,,44
38
eventDate/_alt,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44
39
VerbatimCollectingDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/0,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44
40
DayCollected,"/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44
41
MonthCollected,"/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,44
42
YearCollected,"/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,44
43
CollectedDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/2,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44
44
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/2,,44
45 1303 aaronmk
MaximumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
46
MaximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
47
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
48
MinimumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
49
MinimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
50
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
51 1353 aaronmk
DateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date,,120
52
dateIdentified/_alt,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping,120
53
IdentifiedDate,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_alt/0,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping,120
54
DayIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,120
55
MonthIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,120
56
YearIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,120
57
dateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_alt/2,,120
58
IdentifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
59
identifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
60
ScientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
61
scientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
62
ScientificNameAuthor,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
63
ScientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
64
scientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
65
InfraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
66
Subspecies,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
67
infraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
68
Species,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
69
SpecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
70
specificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
71
Genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
72
genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
73
Family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
74
family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
75
Order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
76
order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
77
Class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
78
class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
79
Phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
80
phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
81
Kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
82
kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
83 1279 aaronmk
GenGankNum,"/_label[label=""GenBank""]/value",This is a typo of GenBankNum from the original CSV,39
84 1267 aaronmk
CollectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
85
collectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
86
Sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
87
sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
88
Notes,/description,,
89
fieldNotes,/description,,
90 1280 aaronmk
FieldNotes,/description/_merge/1,,
91
Remarks,/description/_merge/2,,
92 1267 aaronmk
Collector,/verbatimcollectorname,,23
93 1270 aaronmk
RecordedBy,/verbatimcollectorname,,23
94 1267 aaronmk
recordedBy,/verbatimcollectorname,,23
95
CatalogNumberNumeric,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
96
catalogNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
97
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
98 1270 aaronmk
RecordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
99 1267 aaronmk
recordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
100 1270 aaronmk
CollectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
101 1267 aaronmk
collectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
102
FieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
103
fieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
104 1270 aaronmk
InstitutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
105 1267 aaronmk
institutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
106
GlobalUniqueIdentifier,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
107 1270 aaronmk
OccurrenceID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
108 1267 aaronmk
occurrenceID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
109 1270 aaronmk
AcceptedNameUsage,,,135
110
AcceptedNameUsageID,,,128
111 1279 aaronmk
AgeClass,,,27
112 1270 aaronmk
AssociatedMedia,,,36
113
AssociatedOccurrences,,,38
114
AssociatedReferences,,,37
115
AssociatedSequences,,,39
116
AssociatedTaxa,,,40
117 1267 aaronmk
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
118 1270 aaronmk
Bed,,,117
119
Behavior,,,29
120 1267 aaronmk
CatalogNumber,,Map to nothing so it doesn't overwrite CatalogNumberNumeric
121 1270 aaronmk
Continent,,Brad: OMIT,59
122 1267 aaronmk
ContinentOcean,,Brad: OMIT,59
123 1270 aaronmk
CountryCode,,,64
124
DataGeneralizations,,,17
125
DatasetID,,,10
126
DatasetName,,,13
127 1267 aaronmk
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
128 1270 aaronmk
Day,,Brad: OMIT,50
129
Dcterms:accessRights,,,5
130
Dcterms:bibliographicCitation,,,6
131
Dcterms:language,,,2
132
Dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
133
Dcterms:references,,,7
134
Dcterms:rights,,,3
135
Dcterms:rightsHolder,,,4
136
Dcterms:type,,,0
137
Disposition,,,33
138
DynamicProperties,,,18
139
EarliestAgeOrLowestStage,,,109
140
EarliestEonOrLowestEonothem,,,101
141
EarliestEpochOrLowestSeries,,,107
142
EarliestEraOrLowestErathem,,,103
143
EarliestPeriodOrLowestSystem,,,105
144
EndDayOfYear,,,47
145
EstablishmentMeans,,,30
146
EventID,,,41
147
EventRemarks,,,55
148
EventTime,,Brad: OMIT,45
149
FootprintSRS,,,92
150
FootprintSpatialFit,,,93
151
Formation,,,115
152 1279 aaronmk
GeoRefMethod,,,96
153 1270 aaronmk
GeodeticDatum,,,87
154
GeologicalContextID,,,100
155
GeoreferenceProtocol,,,96
156
GeoreferenceRemarks,,,99
157
GeoreferenceSources,,,97
158
GeoreferenceVerificationStatus,,,98
159
GeoreferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
160
GeoreferencedDate,,,95
161
Group,,,114
162
HigherClassification,,,141
163 1278 aaronmk
HigherGeography,,,58
164 1270 aaronmk
HigherGeographyID,,,57
165
HighestBiostratigraphicZone,,,112
166 1279 aaronmk
HorizontalDatum,,Not used
167 1270 aaronmk
IdentificationID,,,118
168 1279 aaronmk
IdentificationModifier,,,124
169 1270 aaronmk
IdentificationQualifier,,,124
170
IdentificationReferences,,,121
171
IdentificationRemarks,,,123
172
IdentificationVerificationStatus,,,122
173 1267 aaronmk
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
174 1270 aaronmk
IndividualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
175
InformationWithheld,,,16
176 1267 aaronmk
InstitutionCode,,,
177 1278 aaronmk
Island,,,62
178
IslandGroup,,,61
179 1267 aaronmk
JulianDay,,Brad: OMIT,50
180 1279 aaronmk
LatLongComments,,,99
181 1270 aaronmk
LatestAgeOrHighestStage,,,110
182
LatestEonOrHighestEonothem,,,102
183
LatestEpochOrHighestSeries,,,108
184
LatestEraOrHighestErathem,,,104
185
LatestPeriodOrHighestSystem,,,106
186
LifeStage,,,27
187
LithostratigraphicTerms,,,113
188
LocationAccordingTo,,,78
189
LocationID,,,56
190
LocationRemarks,,,79
191
LowestBiostratigraphicZone,,,111
192
MaximumDistanceAboveSurfaceInMeters,,,77
193
MeasurementAccuracy,,,169
194
MeasurementDeterminedBy,,,172
195
MeasurementDeterminedDate,,,171
196
MeasurementID,,,166
197
MeasurementMethod,,,173
198
MeasurementRemarks,,,174
199
MeasurementType,,,167
200
MeasurementUnit,,,170
201
MeasurementValue,,,168
202
Member,,,116
203
MinimumDistanceAboveSurfaceInMeters,,,76
204
Month,,,49
205
Municipality,,,67
206
NameAccordingTo,,,138
207
NameAccordingToID,,,131
208
NamePublishedIn,,,139
209
NamePublishedInID,,,132
210
NamePublishedInYear,,,140
211
NomenclaturalCode,,,155
212
NomenclaturalStatus,,,157
213
OccurrenceRemarks,,,21
214
OccurrenceStatus,,,31
215 1279 aaronmk
OriginalCoordinateSystem,,,84
216 1270 aaronmk
OriginalNameUsage,,,137
217
OriginalNameUsageID,,,130
218 1279 aaronmk
OtherCatalogNumber,,Brad: OMIT,161
219 1270 aaronmk
OtherCatalogNumbers,,,34
220
OwnerInstitutionCode,,,14
221
ParentNameUsage,,,136
222
ParentNameUsageID,,,129
223
PointRadiusSpatialFit,,,90
224 1267 aaronmk
PreparationType,,Brad: OMIT,32
225 1270 aaronmk
Preparations,,Brad: OMIT,32
226 1267 aaronmk
PreviousCatalogNumber,,?; Brad: OMIT,35
227 1270 aaronmk
PreviousIdentifications,,Brad: OMIT,35
228 1267 aaronmk
RelatedCatalogItem,,Brad: OMIT,161
229 1356 aaronmk
RelatedCatalogItems,,"Used only when OtherCatalogNumber is NULL, so _alt not needed; Brad: OMIT",161
230 1270 aaronmk
RelatedResourceID,,Brad: OMIT,161
231
RelationshipAccordingTo,,,163
232
RelationshipEstablishedDate,,,164
233
RelationshipOfResource,,Brad: OMIT,162
234
RelationshipRemarks,,,165
235 1267 aaronmk
RelationshipType,,Brad: OMIT,162
236 1270 aaronmk
ReproductiveCondition,,,28
237
ResourceID,,,160
238
ResourceRelationshipID,,,159
239
SamplingEffort,,,43
240
SamplingProtocol,,,42
241
ScientificNameID,,,127
242
StartDayOfYear,,,46
243
Subgenus,,,148
244
TaxonConceptID,,,133
245
TaxonID,,,126
246
TaxonRank,,,151
247
TaxonRemarks,,,158
248
TaxonomicStatus,,,156
249 1267 aaronmk
TimeOfDay,,Brad: OMIT,45
250 1279 aaronmk
Tissues,,Not used
251 1267 aaronmk
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
252 1270 aaronmk
VerbatimCoordinateSystem,,,83
253
VerbatimCoordinates,,,80
254 1278 aaronmk
VerbatimDepth,,,73
255
VerbatimElevation,,,70
256 1270 aaronmk
VerbatimEventDate,,,51
257
VerbatimSRS,,,84
258
VerbatimTaxonRank,,,152
259
VernacularName,,,154
260
WaterBody,,,60
261
Year,,,48
262 1267 aaronmk
acceptedNameUsage,,,135
263
acceptedNameUsageID,,,128
264
associatedMedia,,,36
265
associatedOccurrences,,,38
266
associatedReferences,,,37
267
associatedSequences,,,39
268
associatedTaxa,,,40
269
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
270
bed,,,117
271
behavior,,,29
272
continent,,Brad: OMIT,59
273
countryCode,,,64
274
dataGeneralizations,,,17
275
datasetID,,,10
276
datasetName,,,13
277
day,,Brad: OMIT,50
278
dcterms:accessRights,,,5
279
dcterms:bibliographicCitation,,,6
280
dcterms:language,,,2
281
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
282
dcterms:references,,,7
283
dcterms:rights,,,3
284
dcterms:rightsHolder,,,4
285
dcterms:type,,,0
286
disposition,,,33
287
dynamicProperties,,,18
288
earliestAgeOrLowestStage,,,109
289
earliestEonOrLowestEonothem,,,101
290
earliestEpochOrLowestSeries,,,107
291
earliestEraOrLowestErathem,,,103
292
earliestPeriodOrLowestSystem,,,105
293
endDayOfYear,,,47
294
establishmentMeans,,,30
295
eventID,,,41
296
eventRemarks,,,55
297
eventTime,,Brad: OMIT,45
298
footprintSRS,,,92
299
footprintSpatialFit,,,93
300
formation,,,115
301
geodeticDatum,,,87
302
geologicalContextID,,,100
303
georeferenceProtocol,,,96
304
georeferenceRemarks,,,99
305
georeferenceSources,,,97
306
georeferenceVerificationStatus,,,98
307
georeferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
308
georeferencedDate,,,95
309
group,,,114
310
higherClassification,,,141
311
higherGeography,,,58
312
higherGeographyID,,,57
313
highestBiostratigraphicZone,,,112
314
identificationID,,,118
315
identificationQualifier,,,124
316
identificationReferences,,,121
317
identificationRemarks,,,123
318
identificationVerificationStatus,,,122
319
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
320
individualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
321
informationWithheld,,,16
322
institutionCode,,,
323
island,,,62
324
islandGroup,,,61
325
latestAgeOrHighestStage,,,110
326
latestEonOrHighestEonothem,,,102
327
latestEpochOrHighestSeries,,,108
328
latestEraOrHighestErathem,,,104
329
latestPeriodOrHighestSystem,,,106
330
lifeStage,,,27
331
lithostratigraphicTerms,,,113
332
locationAccordingTo,,,78
333
locationID,,,56
334
locationRemarks,,,79
335
lowestBiostratigraphicZone,,,111
336
maximumDistanceAboveSurfaceInMeters,,,77
337
measurementAccuracy,,,169
338
measurementDeterminedBy,,,172
339
measurementDeterminedDate,,,171
340
measurementID,,,166
341
measurementMethod,,,173
342
measurementRemarks,,,174
343
measurementType,,,167
344
measurementUnit,,,170
345
measurementValue,,,168
346
member,,,116
347
minimumDistanceAboveSurfaceInMeters,,,76
348
month,,,49
349
municipality,,,67
350
nameAccordingTo,,,138
351
nameAccordingToID,,,131
352
namePublishedIn,,,139
353
namePublishedInID,,,132
354
namePublishedInYear,,,140
355
nomenclaturalCode,,,155
356
nomenclaturalStatus,,,157
357
occurrenceRemarks,,,21
358
occurrenceStatus,,,31
359
originalNameUsage,,,137
360
originalNameUsageID,,,130
361
otherCatalogNumbers,,,34
362
ownerInstitutionCode,,,14
363
parentNameUsage,,,136
364
parentNameUsageID,,,129
365
pointRadiusSpatialFit,,,90
366
preparations,,Brad: OMIT,32
367
previousIdentifications,,Brad: OMIT,35
368
relatedResourceID,,Brad: OMIT,161
369
relationshipAccordingTo,,,163
370
relationshipEstablishedDate,,,164
371
relationshipOfResource,,Brad: OMIT,162
372
relationshipRemarks,,,165
373
reproductiveCondition,,,28
374
resourceID,,,160
375
resourceRelationshipID,,,159
376
samplingEffort,,,43
377
samplingProtocol,,,42
378
scientificNameID,,,127
379
startDayOfYear,,,46
380
subgenus,,,148
381
taxonConceptID,,,133
382
taxonID,,,126
383
taxonRank,,,151
384
taxonRemarks,,,158
385
taxonomicStatus,,,156
386
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
387
verbatimCoordinateSystem,,,83
388
verbatimCoordinates,,,80
389
verbatimDepth,,,73
390
verbatimElevation,,,70
391
verbatimEventDate,,,51
392
verbatimSRS,,,84
393
verbatimTaxonRank,,,152
394
vernacularName,,,154
395
waterBody,,,60
396
year,,,48