Revision 13575
Added by Aaron Marcuse-Kubitza over 10 years ago
trunk/inputs/.TNRS/schema.sql | ||
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-- Name: SCHEMA "TNRS"; Type: COMMENT; Schema: -; Owner: - |
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-- |
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COMMENT ON SCHEMA "TNRS" IS 'IMPORTANT: when changing this schema, you must also make the same changes on vegbiendev: |
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COMMENT ON SCHEMA "TNRS" IS ' |
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IMPORTANT: when changing this schema, you must also make the same changes on vegbiendev: |
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on vegbiendev: |
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# back up existing TNRS schema (in case of an accidental incorrect change): |
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$ make backups/TNRS.backup-remake # runtime: 3 min ("real 2m44.277s") |
... | ... | |
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$ rm=1 inputs/.TNRS/schema.sql.run |
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# repeat until `svn di` shows no diff |
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# back up new TNRS schema: |
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$ make backups/TNRS.backup-remake # runtime: 3 min ("real 2m44.277s")'; |
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$ make backups/TNRS.backup-remake # runtime: 3 min ("real 2m44.277s") |
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'; |
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SET search_path = "TNRS", pg_catalog; |
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-- Name: FUNCTION tnrs_populate_fields(); Type: COMMENT; Schema: TNRS; Owner: - |
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-- |
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COMMENT ON FUNCTION tnrs_populate_fields() IS 'IMPORTANT: when changing this function, you must regenerate the derived cols: |
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COMMENT ON FUNCTION tnrs_populate_fields() IS ' |
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IMPORTANT: when changing this function, you must regenerate the derived cols: |
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UPDATE "TNRS".tnrs SET "Name_submitted" = "Name_submitted" |
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runtime: 30 min ("5564082 rows affected, 1918900 ms execution time") |
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VACUUM ANALYZE "TNRS".tnrs -- to remove previous rows |
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runtime: 1.5 min ("92633 ms")'; |
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runtime: 1.5 min ("92633 ms") |
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'; |
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SET default_tablespace = ''; |
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-- Name: TABLE tnrs; Type: COMMENT; Schema: TNRS; Owner: - |
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-- |
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COMMENT ON TABLE tnrs IS 'IMPORTANT: when changing this table''s schema, you may need to re-run TNRS: |
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$ inputs/.TNRS/data.sql.run refresh'; |
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COMMENT ON TABLE tnrs IS ' |
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IMPORTANT: when changing this table''s schema, you may need to re-run TNRS: |
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$ inputs/.TNRS/data.sql.run refresh |
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'; |
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-- |
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-- Name: TABLE batch_download_settings; Type: COMMENT; Schema: TNRS; Owner: - |
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-- |
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COMMENT ON TABLE batch_download_settings IS 'stores data from http://tnrs.iplantcollaborative.org/TNRSapp.html > Submit List > results section > Download settings > settings.txt'; |
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COMMENT ON TABLE batch_download_settings IS ' |
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stores data from http://tnrs.iplantcollaborative.org/TNRSapp.html > Submit List > results section > Download settings > settings.txt |
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'; |
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-- |
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-- Name: TABLE client_version; Type: COMMENT; Schema: TNRS; Owner: - |
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-- |
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COMMENT ON TABLE client_version IS 'contains svn revisions'; |
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COMMENT ON TABLE client_version IS ' |
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contains svn revisions |
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'; |
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-- |
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-- Name: COLUMN client_version.global_rev; Type: COMMENT; Schema: TNRS; Owner: - |
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-- |
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COMMENT ON COLUMN client_version.global_rev IS 'from `svn info .` > Last Changed Rev'; |
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COMMENT ON COLUMN client_version.global_rev IS ' |
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from `svn info .` > Last Changed Rev |
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'; |
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-- |
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-- Name: COLUMN client_version."/lib/tnrs.py rev"; Type: COMMENT; Schema: TNRS; Owner: - |
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-- |
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COMMENT ON COLUMN client_version."/lib/tnrs.py rev" IS 'from `svn info lib/tnrs.py` > Last Changed Rev'; |
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COMMENT ON COLUMN client_version."/lib/tnrs.py rev" IS ' |
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from `svn info lib/tnrs.py` > Last Changed Rev |
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'; |
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-- |
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-- Name: COLUMN client_version."/bin/tnrs_db rev"; Type: COMMENT; Schema: TNRS; Owner: - |
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-- |
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COMMENT ON COLUMN client_version."/bin/tnrs_db rev" IS 'from `svn info bin/tnrs_db` > Last Changed Rev'; |
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COMMENT ON COLUMN client_version."/bin/tnrs_db rev" IS ' |
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from `svn info bin/tnrs_db` > Last Changed Rev |
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'; |
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-- |
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-- Name: VIEW "taxon_scrub.scrubbed_unique_taxon_name.*"; Type: COMMENT; Schema: TNRS; Owner: - |
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-- |
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COMMENT ON VIEW "taxon_scrub.scrubbed_unique_taxon_name.*" IS 'scrubbed_family: Name_matched_accepted_family was missing from the TNRS results at one point, so Family_matched is used as a workaround to populate this. the workaround is for *accepted names only*, as no opinion names do not have an Accepted_name_family to prepend to the scrubbed name to parse.'; |
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COMMENT ON VIEW "taxon_scrub.scrubbed_unique_taxon_name.*" IS ' |
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scrubbed_family: Name_matched_accepted_family was missing from the TNRS results at one point, so Family_matched is used as a workaround to populate this. the workaround is for *accepted names only*, as no opinion names do not have an Accepted_name_family to prepend to the scrubbed name to parse. |
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'; |
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-- |
Also available in: Unified diff
inputs/.TNRS/schema.sql: made COMMENTs start on their own line, using the steps at wiki.vegpath.org/Postgres_queries#make-COMMENTs-start-on-their-own-line