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Name Size Revision Age Author Comment
  logs 8801 over 11 years Aaron Marcuse-Kubitza inputs/input.Makefile: SVN: add, %/add: */logs:...
+header.dmp 68 Bytes 5491 about 12 years Aaron Marcuse-Kubitza Added inputs/.NCBI/. This uses many of the new ...
.map.csv.last_cleanup 0 Bytes 11863 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/.NCBI/import_order.txt: added no...
VegBIEN.csv 42 Bytes 12029 almost 11 years Aaron Marcuse-Kubitza inputs/.geoscrub/county_centroids/test.xml.ref,...
_no_import 0 Bytes 11903 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_i...
header.csv 66 Bytes 10091 over 11 years Aaron Marcuse-Kubitza added inputs/*/*/header.csv for CSV inputs, whi...
map.csv 197 Bytes 11863 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/.NCBI/import_order.txt: added no...
new_terms.csv 67 Bytes 11863 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/.NCBI/import_order.txt: added no...
run 63 Bytes 11863 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/.NCBI/import_order.txt: added no...
test.xml.ref 1.79 KB 12029 almost 11 years Aaron Marcuse-Kubitza inputs/.geoscrub/county_centroids/test.xml.ref,...
unmapped_terms.csv 56 Bytes 11863 almost 11 years Aaron Marcuse-Kubitza bugfix: inputs/.NCBI/import_order.txt: added no...
  • svn:ignore: *

Latest revisions

# Date Author Comment
12029 02/02/2014 11:10 PM Aaron Marcuse-Kubitza

inputs/.geoscrub/county_centroids/test.xml.ref, inputs/.NCBI/{names.src,nodes.src}/test.xml.ref: accepted test outputs (generated now that these tables are in import_order.txt)

11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).

11903 12/11/2013 10:40 PM Aaron Marcuse-Kubitza

bugfix: inputs/{.NCBI,CTFS}/*.src/: added _no_import because these tables are left-joined and should not be imported separately

11863 12/06/2013 06:12 AM Aaron Marcuse-Kubitza

bugfix: inputs/.NCBI/import_order.txt: added nodes.src, names.src so that these would be installed under new-style import as well. this means that their columns will now be automapped, requiring the names to be renamed to VegCore names in nodes/create.sql.

10091 06/27/2013 12:28 PM Aaron Marcuse-Kubitza

added inputs/*/*/header.csv for CSV inputs, which are now generated by inputs/input.Makefile %/install

8801 05/02/2013 08:53 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: SVN: add, %/add: */logs: also svn:ignore *.gz, used for compressed log files

5702 10/23/2012 12:49 AM Aaron Marcuse-Kubitza

inputs/.NCBI/: Renamed names, nodes to *.src so they wouldn't get an automatic row_num column and can be used in higher_taxa's join

5491 10/12/2012 05:11 PM Aaron Marcuse-Kubitza

Added inputs/.NCBI/. This uses many of the new schema and mappings features, such as taxonconcept.sourceaccessioncode and parentTaxonID

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