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Revision 13763

Added by Aaron Marcuse-Kubitza over 10 years ago

*: use vegbiendev:/home/bien instead of /home/bien/svn

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trunk/inputs/CTFS/_src/_README.TXT
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e-mails from Brad Boyle <bboyle@email.arizona.edu> on 2013-3-8:
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We are hoping to finish loading and validating the BIEN3 database in the next couple of weeks so we can re-run the species distribution models in April. For this first release of BIEN3, we are fine with using the same summary CTFS extract used for BIEN2, as long as it does not contain any known errors. I seem to recall there were doubts as to whether counts of individuals were aggregated correctly by species. Attached is an example of the first few lines from that data dump. If you wish to review the entire file, it is on vegbiendev.nceas.ucsb.edu in /home/bien/svn/inputs/CTFS/_src/ctfs_extract.tab. If you do not already have a shell account on that server, Aaron can set you up.
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We are hoping to finish loading and validating the BIEN3 database in the next couple of weeks so we can re-run the species distribution models in April. For this first release of BIEN3, we are fine with using the same summary CTFS extract used for BIEN2, as long as it does not contain any known errors. I seem to recall there were doubts as to whether counts of individuals were aggregated correctly by species. Attached is an example of the first few lines from that data dump. If you wish to review the entire file, it is on vegbiendev.nceas.ucsb.edu in /home/bien/inputs/CTFS/_src/ctfs_extract.tab. If you do not already have a shell account on that server, Aaron can set you up.
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If you think this extract is error-free, then we will go ahead and use it for the first release of BIEN3. If not, then we would like to request a new extract.


  		




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      trunk/README.TXT
    
  





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Connecting to vegbiendev:


  		




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	ssh -t vegbiendev.nceas.ucsb.edu exec sudo -u aaronmk -i


  		




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	cd /home/bien/svn # should happen automatically at login


  		




  
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	cd /home/bien # should happen automatically at login


  		




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Notes on system stability:


  		




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	**WARNING**: system upgrades can break key parts of the full-database


  		












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