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#!/bin/bash
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# Creates analytical DB
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# Usage: self [log=]
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selfDir="$(dirname -- "$0")"
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6
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. "$selfDir/vegbien_dest"
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if test -n "${log=1}"; then # $log defaults to 1
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exec >>"$selfDir/../inputs/analytical_db/logs/make_analytical_db.log.sql" 2>&1
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fi
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12
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(set -x; date)
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14
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sleep 5 # wait for tnrs.make to acquire the lock if being run right after import
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"$selfDir/waitself" "$selfDir/../inputs/.TNRS/tnrs/tnrs.make"
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mk_table()
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{
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local table="$1"
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local public_table="\"$public\".$table"
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cat <<EOF
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-- Create $table
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TRUNCATE $public_table;
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INSERT INTO $public_table SELECT * FROM ${public_table}_view;
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ANALYZE $public_table;
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EOF
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}
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((set -x; "$selfDir/psql_verbose_vegbien") <<EOF
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GRANT USAGE ON SCHEMA analytical_db TO bien_read;
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GRANT USAGE ON SCHEMA analytical_db TO public_;
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$(mk_table geoscrub_input)
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35
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$(mk_table threatened_taxonlabel)
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$(mk_table taxon_trait)
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$(mk_table analytical_stem)
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$(mk_table provider_count)
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GRANT SELECT ON TABLE analytical_db.provider_count TO public_;
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EOF
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) || exit
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remake=1 "$selfDir"/../run export_ </dev/null
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#"$selfDir/export_analytical_db"
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