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Revision 1410

Merged inputs/NYBG-CSV into NYBG

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inputs/NYBG-CSV/test/import.specimens.out.ref
1
Inserted 29 new rows into database
inputs/NYBG-CSV/test/DwC.specimens.xml.ref
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<?xml version="1.0" ?>
2
<DwC xmlns:dcterms="http://purl.org/dc/terms/">
3
    <list id="0">
4
        <institutionID>NYBG-CSV</institutionID>
5
        <BasisOfRecord>S</BasisOfRecord>
6
        <CatalogNumber>00682023</CatalogNumber>
7
        <CollectionCode>Herbarium</CollectionCode>
8
        <Collector>R. B. Foster</Collector>
9
        <ContinentOcean>South America</ContinentOcean>
10
        <Country>Peru</Country>
11
        <County>Man&#250;</County>
12
        <DateLastModified>2005-2-22T14:47:32.000EST</DateLastModified>
13
        <DayCollected>20</DayCollected>
14
        <Family>Lecythidaceae</Family>
15
        <FieldNumber>9877</FieldNumber>
16
        <Genus>Cariniana</Genus>
17
        <Habitat>Floodplain forest</Habitat>
18
        <InstitutionCode>NY</InstitutionCode>
19
        <JulianDay>233</JulianDay>
20
        <Kingdom>Plantae</Kingdom>
21
        <Latitude>-11.80</Latitude>
22
        <Locality>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</Locality>
23
        <Longitude>-71.40</Longitude>
24
        <MaximumElevation>350</MaximumElevation>
25
        <MinimumElevation>350</MinimumElevation>
26
        <MonthCollected>8</MonthCollected>
27
        <Notes>plant fungus: with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</Notes>
28
        <Phylum>Magnoliophyta (flowering plants)</Phylum>
29
        <ScientificName>Cariniana estrellensis (Raddi) Kuntze</ScientificName>
30
        <ScientificNameAuthor>(Raddi) Kuntze</ScientificNameAuthor>
31
        <Species>estrellensis</Species>
32
        <StateProvince>Madre de Dios</StateProvince>
33
        <YearCollected>1984</YearCollected>
34
        <occurrenceID>816590</occurrenceID>
35
    </list>
36
    <list id="1">
37
        <institutionID>NYBG-CSV</institutionID>
38
        <BasisOfRecord>S</BasisOfRecord>
39
        <CatalogNumber>200996</CatalogNumber>
40
        <CollectionCode>Herbarium</CollectionCode>
41
        <Collector>J. B. Walker</Collector>
42
        <ContinentOcean>Central America</ContinentOcean>
43
        <Country>Belize</Country>
44
        <DateLastModified>2004-1-13T00:00EST</DateLastModified>
45
        <DayCollected>17</DayCollected>
46
        <Family>Scrophulariaceae</Family>
47
        <FieldNumber>545</FieldNumber>
48
        <InstitutionCode>NY</InstitutionCode>
49
        <JulianDay>17</JulianDay>
50
        <Kingdom>Plantae</Kingdom>
51
        <Latitude>17.40</Latitude>
52
        <Locality>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</Locality>
53
        <Longitude>-88.50</Longitude>
54
        <MaximumElevation>15</MaximumElevation>
55
        <MinimumElevation>15</MinimumElevation>
56
        <MonthCollected>1</MonthCollected>
57
        <Phylum>Magnoliophyta (flowering plants)</Phylum>
58
        <ScientificName>Scrophulariaceae</ScientificName>
59
        <StateProvince>Belize District</StateProvince>
60
        <YearCollected>1994</YearCollected>
61
        <occurrenceID>220541</occurrenceID>
62
    </list>
63
</DwC>
inputs/NYBG-CSV/test/VegBIEN.specimens.xml.ref
1
<?xml version="1.0" ?>
2
<VegBIEN>
3
    <specimenreplicate id="0">
4
        <taxonoccurrence_id>
5
            <taxonoccurrence>
6
                <locationevent_id>
7
                    <locationevent>
8
                        <location_id>
9
                            <location>
10
                                <locationdetermination>
11
                                    <namedplace_id>
12
                                        <namedplace>
13
                                            <rank>county</rank>
14
                                            <placename>Man&#250;</placename>
15
                                            <parent_id>
16
                                                <namedplace>
17
                                                    <rank>stateProvince</rank>
18
                                                    <placename>Madre de Dios</placename>
19
                                                    <parent_id>
20
                                                        <namedplace>
21
                                                            <rank>country</rank>
22
                                                            <placename>Peru</placename>
23
                                                        </namedplace>
24
                                                    </parent_id>
25
                                                </namedplace>
26
                                            </parent_id>
27
                                        </namedplace>
28
                                    </namedplace_id>
29
                                    <latitude>-11.80</latitude>
30
                                    <longitude>-71.40</longitude>
31
                                </locationdetermination>
32
                                <locationnarrative>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station; habitat: Floodplain forest</locationnarrative>
33
                                <elevation>350.0</elevation>
34
                                <elevationrange>0.0</elevationrange>
35
                                <centerlatitude>-11.80</centerlatitude>
36
                                <centerlongitude>-71.40</centerlongitude>
37
                            </location>
38
                        </location_id>
39
                        <obsstartdate>1984-08-20</obsstartdate>
40
                        <obsenddate/>
41
                    </locationevent>
42
                </locationevent_id>
43
                <taxondetermination>
44
                    <role>identifier</role>
45
                    <isoriginal>true</isoriginal>
46
                    <iscurrent>true</iscurrent>
47
                    <plantconcept_id>
48
                        <plantconcept>
49
                            <plantname_id>
50
                                <plantname>
51
                                    <rank>binomial</rank>
52
                                    <plantname>Cariniana estrellensis (Raddi) Kuntze</plantname>
53
                                    <parent_id>
54
                                        <plantname>
55
                                            <rank>authority</rank>
56
                                            <plantname>(Raddi) Kuntze</plantname>
57
                                            <parent_id>
58
                                                <plantname>
59
                                                    <rank>species</rank>
60
                                                    <plantname>estrellensis</plantname>
61
                                                    <parent_id>
62
                                                        <plantname>
63
                                                            <rank>genus</rank>
64
                                                            <plantname>Cariniana</plantname>
65
                                                            <parent_id>
66
                                                                <plantname>
67
                                                                    <rank>family</rank>
68
                                                                    <plantname>Lecythidaceae</plantname>
69
                                                                    <parent_id>
70
                                                                        <plantname>
71
                                                                            <rank>subkingdom</rank>
72
                                                                            <plantname>Magnoliophyta (flowering plants)</plantname>
73
                                                                            <parent_id>
74
                                                                                <plantname>
75
                                                                                    <rank>kingdom</rank>
76
                                                                                    <plantname>Plantae</plantname>
77
                                                                                </plantname>
78
                                                                            </parent_id>
79
                                                                        </plantname>
80
                                                                    </parent_id>
81
                                                                </plantname>
82
                                                            </parent_id>
83
                                                        </plantname>
84
                                                    </parent_id>
85
                                                </plantname>
86
                                            </parent_id>
87
                                        </plantname>
88
                                    </parent_id>
89
                                </plantname>
90
                            </plantname_id>
91
                        </plantconcept>
92
                    </plantconcept_id>
93
                </taxondetermination>
94
            </taxonoccurrence>
95
        </taxonoccurrence_id>
96
        <collectioncode_dwc>Herbarium</collectioncode_dwc>
97
        <description>plant fungus: with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</description>
98
        <verbatimcollectorname>R. B. Foster</verbatimcollectorname>
99
        <datasource_id><party><organizationname>NYBG-CSV</organizationname></party></datasource_id>
100
        <catalognumber_dwc>00682023</catalognumber_dwc>
101
        <collectionnumber>9877</collectionnumber>
102
        <sourceaccessioncode>816590</sourceaccessioncode>
103
    </specimenreplicate>
104
    <specimenreplicate id="1">
105
        <taxonoccurrence_id>
106
            <taxonoccurrence>
107
                <locationevent_id>
108
                    <locationevent>
109
                        <location_id>
110
                            <location>
111
                                <locationdetermination>
112
                                    <namedplace_id>
113
                                        <namedplace>
114
                                            <rank>stateProvince</rank>
115
                                            <placename>Belize District</placename>
116
                                            <parent_id>
117
                                                <namedplace>
118
                                                    <rank>country</rank>
119
                                                    <placename>Belize</placename>
120
                                                </namedplace>
121
                                            </parent_id>
122
                                        </namedplace>
123
                                    </namedplace_id>
124
                                    <latitude>17.40</latitude>
125
                                    <longitude>-88.50</longitude>
126
                                </locationdetermination>
127
                                <locationnarrative>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</locationnarrative>
128
                                <elevation>15.0</elevation>
129
                                <elevationrange>0.0</elevationrange>
130
                                <centerlatitude>17.40</centerlatitude>
131
                                <centerlongitude>-88.50</centerlongitude>
132
                            </location>
133
                        </location_id>
134
                        <obsstartdate>1994-01-17</obsstartdate>
135
                        <obsenddate/>
136
                    </locationevent>
137
                </locationevent_id>
138
                <taxondetermination>
139
                    <role>identifier</role>
140
                    <isoriginal>true</isoriginal>
141
                    <iscurrent>true</iscurrent>
142
                    <plantconcept_id>
143
                        <plantconcept>
144
                            <plantname_id>
145
                                <plantname>
146
                                    <rank>binomial</rank>
147
                                    <plantname>Scrophulariaceae</plantname>
148
                                    <parent_id>
149
                                        <plantname>
150
                                            <rank>family</rank>
151
                                            <plantname>Scrophulariaceae</plantname>
152
                                            <parent_id>
153
                                                <plantname>
154
                                                    <rank>subkingdom</rank>
155
                                                    <plantname>Magnoliophyta (flowering plants)</plantname>
156
                                                    <parent_id>
157
                                                        <plantname>
158
                                                            <rank>kingdom</rank>
159
                                                            <plantname>Plantae</plantname>
160
                                                        </plantname>
161
                                                    </parent_id>
162
                                                </plantname>
163
                                            </parent_id>
164
                                        </plantname>
165
                                    </parent_id>
166
                                </plantname>
167
                            </plantname_id>
168
                        </plantconcept>
169
                    </plantconcept_id>
170
                </taxondetermination>
171
            </taxonoccurrence>
172
        </taxonoccurrence_id>
173
        <collectioncode_dwc>Herbarium</collectioncode_dwc>
174
        <verbatimcollectorname>J. B. Walker</verbatimcollectorname>
175
        <datasource_id><party><organizationname>NYBG-CSV</organizationname></party></datasource_id>
176
        <catalognumber_dwc>200996</catalognumber_dwc>
177
        <collectionnumber>545</collectionnumber>
178
        <sourceaccessioncode>220541</sourceaccessioncode>
179
    </specimenreplicate>
180
</VegBIEN>
inputs/NYBG-CSV/maps/DwC.specimens.csv
1
"NYBG-CSV[DwC]","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/","Comments"
2
"key",,
3
"Locality","Locality/_merge/1",
4
"MinimumElevation","MinimumElevation/_nullIf:[null=.]/value",
5
"Notes","Notes/_merge/1",
6
"PlantFungusDescription","Notes/_merge/2/_label[label=""plant fungus""]/value",
7
"Substrate","Locality/_merge/2/_label[label=""substrate""]/value",
8
"Vegetation","Locality/_merge/3/_label[label=""vegetation""]/value",
9
"UniqueNYInternalRecordNumber","occurrenceID",
inputs/NYBG-CSV/maps/DwC.specimens.full.csv
1
NYBG-CSV[DwC],"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",Comments
2
AcceptedNameUsage,AcceptedNameUsage
3
AcceptedNameUsageID,AcceptedNameUsageID
4
AssociatedMedia,AssociatedMedia
5
AssociatedOccurrences,AssociatedOccurrences
6
AssociatedReferences,AssociatedReferences
7
AssociatedSequences,AssociatedSequences
8
AssociatedTaxa,AssociatedTaxa
9
BasisOfRecord,BasisOfRecord
10
Bed,Bed
11
Behavior,Behavior
12
BoundingBox,BoundingBox
13
CatalogNumber,CatalogNumber
14
Class,Class
15
CollectedDate,CollectedDate
16
CollectionCode,CollectionCode
17
CollectionID,CollectionID
18
Collector,Collector
19
CollectorNumber,CollectorNumber
20
Continent,Continent
21
ContinentOcean,ContinentOcean
22
CoordinatePrecision,CoordinatePrecision
23
CoordinateUncertaintyInMeters,CoordinateUncertaintyInMeters
24
Country,Country
25
CountryCode,CountryCode
26
County,County
27
DataGeneralizations,DataGeneralizations
28
DatasetID,DatasetID
29
DatasetName,DatasetName
30
DateIdentified,DateIdentified
31
DateLastModified,DateLastModified
32
Day,Day
33
DayCollected,DayCollected
34
DayIdentified,DayIdentified
35
Dcterms:accessRights,Dcterms:accessRights
36
Dcterms:bibliographicCitation,Dcterms:bibliographicCitation
37
Dcterms:language,Dcterms:language
38
Dcterms:modified,Dcterms:modified
39
Dcterms:references,Dcterms:references
40
Dcterms:rights,Dcterms:rights
41
Dcterms:rightsHolder,Dcterms:rightsHolder
42
Dcterms:type,Dcterms:type
43
DecimalLatitude,DecimalLatitude
44
DecimalLongitude,DecimalLongitude
45
Disposition,Disposition
46
DynamicProperties,DynamicProperties
47
EarliestAgeOrLowestStage,EarliestAgeOrLowestStage
48
EarliestEonOrLowestEonothem,EarliestEonOrLowestEonothem
49
EarliestEpochOrLowestSeries,EarliestEpochOrLowestSeries
50
EarliestEraOrLowestErathem,EarliestEraOrLowestErathem
51
EarliestPeriodOrLowestSystem,EarliestPeriodOrLowestSystem
52
EndDayOfYear,EndDayOfYear
53
EstablishmentMeans,EstablishmentMeans
54
EventDate,EventDate
55
EventID,EventID
56
EventRemarks,EventRemarks
57
EventTime,EventTime
58
Family,Family
59
FieldNotes,FieldNotes
60
FieldNumber,FieldNumber
61
FootprintSRS,FootprintSRS
62
FootprintSpatialFit,FootprintSpatialFit
63
FootprintWKT,FootprintWKT
64
Formation,Formation
65
Genus,Genus
66
GeodeticDatum,GeodeticDatum
67
GeologicalContextID,GeologicalContextID
68
GeoreferenceProtocol,GeoreferenceProtocol
69
GeoreferenceRemarks,GeoreferenceRemarks
70
GeoreferenceSources,GeoreferenceSources
71
GeoreferenceVerificationStatus,GeoreferenceVerificationStatus
72
GeoreferencedBy,GeoreferencedBy
73
GeoreferencedDate,GeoreferencedDate
74
GlobalUniqueIdentifier,GlobalUniqueIdentifier
75
Group,Group
76
Habitat,Habitat
77
HigherClassification,HigherClassification
78
HigherGeography,HigherGeography
79
HigherGeographyID,HigherGeographyID
80
HighestBiostratigraphicZone,HighestBiostratigraphicZone
81
IdentificationID,IdentificationID
82
IdentificationQualifier,IdentificationQualifier
83
IdentificationReferences,IdentificationReferences
84
IdentificationRemarks,IdentificationRemarks
85
IdentificationVerificationStatus,IdentificationVerificationStatus
86
IdentifiedBy,IdentifiedBy
87
IdentifiedDate,IdentifiedDate
88
IndividualCount,IndividualCount
89
IndividualID,IndividualID
90
InformationWithheld,InformationWithheld
91
InfraspecificEpithet,InfraspecificEpithet
92
InstitutionCode,InstitutionCode
93
InstitutionID,InstitutionID
94
Island,Island
95
IslandGroup,IslandGroup
96
JulianDay,JulianDay
97
Kingdom,Kingdom
98
LatestAgeOrHighestStage,LatestAgeOrHighestStage
99
LatestEonOrHighestEonothem,LatestEonOrHighestEonothem
100
LatestEpochOrHighestSeries,LatestEpochOrHighestSeries
101
LatestEraOrHighestErathem,LatestEraOrHighestErathem
102
LatestPeriodOrHighestSystem,LatestPeriodOrHighestSystem
103
Latitude,Latitude
104
LifeStage,LifeStage
105
LithostratigraphicTerms,LithostratigraphicTerms
106
Locality,Locality/_merge/1,
107
Substrate,"Locality/_merge/2/_label[label=""substrate""]/value",
108
Vegetation,"Locality/_merge/3/_label[label=""vegetation""]/value",
109
LocationAccordingTo,LocationAccordingTo
110
LocationID,LocationID
111
LocationRemarks,LocationRemarks
112
Longitude,Longitude
113
LowestBiostratigraphicZone,LowestBiostratigraphicZone
114
MaximumDepth,MaximumDepth
115
MaximumDepthInMeters,MaximumDepthInMeters
116
MaximumDistanceAboveSurfaceInMeters,MaximumDistanceAboveSurfaceInMeters
117
MaximumElevation,MaximumElevation
118
MaximumElevationInMeters,MaximumElevationInMeters
119
MeasurementAccuracy,MeasurementAccuracy
120
MeasurementDeterminedBy,MeasurementDeterminedBy
121
MeasurementDeterminedDate,MeasurementDeterminedDate
122
MeasurementID,MeasurementID
123
MeasurementMethod,MeasurementMethod
124
MeasurementRemarks,MeasurementRemarks
125
MeasurementType,MeasurementType
126
MeasurementUnit,MeasurementUnit
127
MeasurementValue,MeasurementValue
128
Member,Member
129
MinimumDepth,MinimumDepth
130
MinimumDepthInMeters,MinimumDepthInMeters
131
MinimumDistanceAboveSurfaceInMeters,MinimumDistanceAboveSurfaceInMeters
132
MinimumElevation,MinimumElevation/_nullIf:[null=.]/value,
133
MinimumElevationInMeters,MinimumElevationInMeters
134
Month,Month
135
MonthCollected,MonthCollected
136
MonthIdentified,MonthIdentified
137
Municipality,Municipality
138
NameAccordingTo,NameAccordingTo
139
NameAccordingToID,NameAccordingToID
140
NamePublishedIn,NamePublishedIn
141
NamePublishedInID,NamePublishedInID
142
NamePublishedInYear,NamePublishedInYear
143
NomenclaturalCode,NomenclaturalCode
144
NomenclaturalStatus,NomenclaturalStatus
145
Notes,Notes/_merge/1,
146
PlantFungusDescription,"Notes/_merge/2/_label[label=""plant fungus""]/value",
147
OccurrenceID,OccurrenceID
148
OccurrenceRemarks,OccurrenceRemarks
149
OccurrenceStatus,OccurrenceStatus
150
Order,Order
151
OriginalNameUsage,OriginalNameUsage
152
OriginalNameUsageID,OriginalNameUsageID
153
OtherCatalogNumbers,OtherCatalogNumbers
154
OwnerInstitutionCode,OwnerInstitutionCode
155
ParentNameUsage,ParentNameUsage
156
ParentNameUsageID,ParentNameUsageID
157
Phylum,Phylum
158
PointRadiusSpatialFit,PointRadiusSpatialFit
159
PreparationType,PreparationType
160
Preparations,Preparations
161
PreviousCatalogNumber,PreviousCatalogNumber
162
PreviousIdentifications,PreviousIdentifications
163
RecordNumber,RecordNumber
164
RecordedBy,RecordedBy
165
RelatedCatalogItem,RelatedCatalogItem
166
RelatedResourceID,RelatedResourceID
167
RelationshipAccordingTo,RelationshipAccordingTo
168
RelationshipEstablishedDate,RelationshipEstablishedDate
169
RelationshipOfResource,RelationshipOfResource
170
RelationshipRemarks,RelationshipRemarks
171
RelationshipType,RelationshipType
172
Remarks,Remarks
173
ReproductiveCondition,ReproductiveCondition
174
ResourceID,ResourceID
175
ResourceRelationshipID,ResourceRelationshipID
176
SamplingEffort,SamplingEffort
177
SamplingProtocol,SamplingProtocol
178
ScientificName,ScientificName
179
ScientificNameAuthor,ScientificNameAuthor
180
ScientificNameAuthorship,ScientificNameAuthorship
181
ScientificNameID,ScientificNameID
182
Sex,Sex
183
Species,Species
184
SpecificEpithet,SpecificEpithet
185
StartDayOfYear,StartDayOfYear
186
StateProvince,StateProvince
187
Subgenus,Subgenus
188
Subspecies,Subspecies
189
TaxonConceptID,TaxonConceptID
190
TaxonID,TaxonID
191
TaxonRank,TaxonRank
192
TaxonRemarks,TaxonRemarks
193
TaxonomicStatus,TaxonomicStatus
194
TimeOfDay,TimeOfDay
195
TypeStatus,TypeStatus
196
VerbatimCoordinateSystem,VerbatimCoordinateSystem
197
VerbatimCoordinates,VerbatimCoordinates
198
VerbatimDepth,VerbatimDepth
199
VerbatimElevation,VerbatimElevation
200
VerbatimEventDate,VerbatimEventDate
201
VerbatimLatitude,VerbatimLatitude
202
VerbatimLocality,VerbatimLocality
203
VerbatimLongitude,VerbatimLongitude
204
VerbatimSRS,VerbatimSRS
205
VerbatimTaxonRank,VerbatimTaxonRank
206
VernacularName,VernacularName
207
WaterBody,WaterBody
208
Year,Year
209
YearCollected,YearCollected
210
YearIdentified,YearIdentified
211
acceptedNameUsage,acceptedNameUsage
212
acceptedNameUsageID,acceptedNameUsageID
213
associatedMedia,associatedMedia
214
associatedOccurrences,associatedOccurrences
215
associatedReferences,associatedReferences
216
associatedSequences,associatedSequences
217
associatedTaxa,associatedTaxa
218
basisOfRecord,basisOfRecord
219
bed,bed
220
behavior,behavior
221
catalogNumber,catalogNumber
222
class,class
223
collectionCode,collectionCode
224
collectionID,collectionID
225
continent,continent
226
coordinatePrecision,coordinatePrecision
227
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters
228
country,country
229
countryCode,countryCode
230
county,county
231
dataGeneralizations,dataGeneralizations
232
datasetID,datasetID
233
datasetName,datasetName
234
dateIdentified,dateIdentified
235
dateIdentified/_alt,dateIdentified/_alt
236
day,day
237
dcterms:accessRights,dcterms:accessRights
238
dcterms:bibliographicCitation,dcterms:bibliographicCitation
239
dcterms:language,dcterms:language
240
dcterms:modified,dcterms:modified
241
dcterms:references,dcterms:references
242
dcterms:rights,dcterms:rights
243
dcterms:rightsHolder,dcterms:rightsHolder
244
dcterms:type,dcterms:type
245
decimalLatitude,decimalLatitude
246
decimalLongitude,decimalLongitude
247
disposition,disposition
248
dynamicProperties,dynamicProperties
249
earliestAgeOrLowestStage,earliestAgeOrLowestStage
250
earliestEonOrLowestEonothem,earliestEonOrLowestEonothem
251
earliestEpochOrLowestSeries,earliestEpochOrLowestSeries
252
earliestEraOrLowestErathem,earliestEraOrLowestErathem
253
earliestPeriodOrLowestSystem,earliestPeriodOrLowestSystem
254
endDayOfYear,endDayOfYear
255
establishmentMeans,establishmentMeans
256
eventDate,eventDate
257
eventDate/_alt,eventDate/_alt
258
eventID,eventID
259
eventRemarks,eventRemarks
260
eventTime,eventTime
261
family,family
262
fieldNotes,fieldNotes
263
fieldNumber,fieldNumber
264
footprintSRS,footprintSRS
265
footprintSpatialFit,footprintSpatialFit
266
footprintWKT,footprintWKT
267
formation,formation
268
genus,genus
269
geodeticDatum,geodeticDatum
270
geologicalContextID,geologicalContextID
271
georeferenceProtocol,georeferenceProtocol
272
georeferenceRemarks,georeferenceRemarks
273
georeferenceSources,georeferenceSources
274
georeferenceVerificationStatus,georeferenceVerificationStatus
275
georeferencedBy,georeferencedBy
276
georeferencedDate,georeferencedDate
277
group,group
278
habitat,habitat
279
higherClassification,higherClassification
280
higherGeography,higherGeography
281
higherGeographyID,higherGeographyID
282
highestBiostratigraphicZone,highestBiostratigraphicZone
283
identificationID,identificationID
284
identificationQualifier,identificationQualifier
285
identificationReferences,identificationReferences
286
identificationRemarks,identificationRemarks
287
identificationVerificationStatus,identificationVerificationStatus
288
identifiedBy,identifiedBy
289
individualCount,individualCount
290
individualID,individualID
291
informationWithheld,informationWithheld
292
infraspecificEpithet,infraspecificEpithet
293
institutionCode,institutionCode
294
institutionID,institutionID
295
island,island
296
islandGroup,islandGroup
297
kingdom,kingdom
298
latestAgeOrHighestStage,latestAgeOrHighestStage
299
latestEonOrHighestEonothem,latestEonOrHighestEonothem
300
latestEpochOrHighestSeries,latestEpochOrHighestSeries
301
latestEraOrHighestErathem,latestEraOrHighestErathem
302
latestPeriodOrHighestSystem,latestPeriodOrHighestSystem
303
lifeStage,lifeStage
304
lithostratigraphicTerms,lithostratigraphicTerms
305
locality,locality
306
locationAccordingTo,locationAccordingTo
307
locationID,locationID
308
locationRemarks,locationRemarks
309
lowestBiostratigraphicZone,lowestBiostratigraphicZone
310
maximumDepthInMeters,maximumDepthInMeters
311
maximumDistanceAboveSurfaceInMeters,maximumDistanceAboveSurfaceInMeters
312
maximumElevationInMeters,maximumElevationInMeters
313
measurementAccuracy,measurementAccuracy
314
measurementDeterminedBy,measurementDeterminedBy
315
measurementDeterminedDate,measurementDeterminedDate
316
measurementID,measurementID
317
measurementMethod,measurementMethod
318
measurementRemarks,measurementRemarks
319
measurementType,measurementType
320
measurementUnit,measurementUnit
321
measurementValue,measurementValue
322
member,member
323
minimumDepthInMeters,minimumDepthInMeters
324
minimumDistanceAboveSurfaceInMeters,minimumDistanceAboveSurfaceInMeters
325
minimumElevationInMeters,minimumElevationInMeters
326
month,month
327
municipality,municipality
328
nameAccordingTo,nameAccordingTo
329
nameAccordingToID,nameAccordingToID
330
namePublishedIn,namePublishedIn
331
namePublishedInID,namePublishedInID
332
namePublishedInYear,namePublishedInYear
333
nomenclaturalCode,nomenclaturalCode
334
nomenclaturalStatus,nomenclaturalStatus
335
UniqueNYInternalRecordNumber,occurrenceID,
336
occurrenceID,occurrenceID
337
occurrenceRemarks,occurrenceRemarks
338
occurrenceStatus,occurrenceStatus
339
order,order
340
originalNameUsage,originalNameUsage
341
originalNameUsageID,originalNameUsageID
342
otherCatalogNumbers,otherCatalogNumbers
343
ownerInstitutionCode,ownerInstitutionCode
344
parentNameUsage,parentNameUsage
345
parentNameUsageID,parentNameUsageID
346
phylum,phylum
347
pointRadiusSpatialFit,pointRadiusSpatialFit
348
preparations,preparations
349
previousIdentifications,previousIdentifications
350
recordNumber,recordNumber
351
recordedBy,recordedBy
352
relatedResourceID,relatedResourceID
353
relationshipAccordingTo,relationshipAccordingTo
354
relationshipEstablishedDate,relationshipEstablishedDate
355
relationshipOfResource,relationshipOfResource
356
relationshipRemarks,relationshipRemarks
357
reproductiveCondition,reproductiveCondition
358
resourceID,resourceID
359
resourceRelationshipID,resourceRelationshipID
360
samplingEffort,samplingEffort
361
samplingProtocol,samplingProtocol
362
scientificName,scientificName
363
scientificNameAuthorship,scientificNameAuthorship
364
scientificNameID,scientificNameID
365
sex,sex
366
specificEpithet,specificEpithet
367
startDayOfYear,startDayOfYear
368
stateProvince,stateProvince
369
subgenus,subgenus
370
taxonConceptID,taxonConceptID
371
taxonID,taxonID
372
taxonRank,taxonRank
373
taxonRemarks,taxonRemarks
374
taxonomicStatus,taxonomicStatus
375
typeStatus,typeStatus
376
verbatimCoordinateSystem,verbatimCoordinateSystem
377
verbatimCoordinates,verbatimCoordinates
378
verbatimDepth,verbatimDepth
379
verbatimElevation,verbatimElevation
380
verbatimEventDate,verbatimEventDate
381
verbatimLatitude,verbatimLatitude
382
verbatimLocality,verbatimLocality
383
verbatimLongitude,verbatimLongitude
384
verbatimSRS,verbatimSRS
385
verbatimTaxonRank,verbatimTaxonRank
386
vernacularName,vernacularName
387
waterBody,waterBody
388
year,year
389
key,,
inputs/NYBG-CSV/maps/VegBIEN.specimens.csv
1
NYBG-CSV[DwC],VegBIEN:/specimenreplicate,Comments,Order
2
CoordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
3
coordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
4
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
5
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
6
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
7
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
8
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
9
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
10
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
11
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
12
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
13
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
14
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
15
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
16
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1/_merge/1,,68
17
Substrate,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1/_merge/2/_label[label=""substrate""]/value",,68
18
Vegetation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1/_merge/3/_label[label=""vegetation""]/value",,68
19
VerbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
20
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
21
Habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
22
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
23
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}",,71
24
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}",,71
25
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}/_nullIf:[null=.]/value",,71
26
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
27
MaximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
28
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
29
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
30
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
31
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
32
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
33
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
34
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
35
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
36
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
37
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
38
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
39
MaximumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
40
MaximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
41
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
42
MinimumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
43
MinimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
44
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
45
EventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value",,44
46
eventDate/_alt,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt",Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44
47
DayCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44
48
MonthCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,44
49
YearCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,44
50
eventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/2",,44
51
CollectedDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/3",,44
52
DateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value,,120
53
dateIdentified/_alt,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping,120
54
DayIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,120
55
MonthIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,120
56
YearIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,120
57
dateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,,120
58
IdentifiedDate,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,,120
59
IdentifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
60
identifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
61
ScientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
62
scientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
63
ScientificNameAuthor,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
64
ScientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
65
scientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
66
InfraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
67
Subspecies,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
68
infraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
69
Species,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
70
SpecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
71
specificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
72
Genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
73
genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
74
Family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
75
family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
76
Order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
77
order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
78
Class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
79
class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
80
Phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
81
phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
82
Kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
83
kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
84
CollectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
85
collectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
86
Sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
87
sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
88
FieldNotes,/description/_merge/1,,
89
fieldNotes,/description/_merge/1,,
90
Notes,/description/_merge/1/_merge/1,,
91
PlantFungusDescription,"/description/_merge/1/_merge/2/_label[label=""plant fungus""]/value",,
92
Remarks,/description/_merge/2,,158
93
TaxonRemarks,/description/_merge/2,,158
94
taxonRemarks,/description/_merge/2,,158
95
Collector,/verbatimcollectorname,,23
96
RecordedBy,/verbatimcollectorname,,23
97
recordedBy,/verbatimcollectorname,,23
98
CatalogNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
99
catalogNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
100
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
101
RecordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
102
recordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
103
CollectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
104
collectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
105
FieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
106
fieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
107
InstitutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
108
institutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
109
GlobalUniqueIdentifier,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
110
OccurrenceID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
111
UniqueNYInternalRecordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
112
occurrenceID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
113
AcceptedNameUsage,,,135
114
AcceptedNameUsageID,,,128
115
AssociatedMedia,,,36
116
AssociatedOccurrences,,,38
117
AssociatedReferences,,,37
118
AssociatedSequences,,,39
119
AssociatedTaxa,,,40
120
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
121
Bed,,,117
122
Behavior,,,29
123
Continent,,Brad: OMIT,59
124
ContinentOcean,,Brad: OMIT,59
125
CountryCode,,,64
126
DataGeneralizations,,,17
127
DatasetID,,,10
128
DatasetName,,,13
129
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
130
Day,,Brad: OMIT,50
131
Dcterms:accessRights,,,5
132
Dcterms:bibliographicCitation,,,6
133
Dcterms:language,,,2
134
Dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
135
Dcterms:references,,,7
136
Dcterms:rights,,,3
137
Dcterms:rightsHolder,,,4
138
Dcterms:type,,,0
139
Disposition,,,33
140
DynamicProperties,,,18
141
EarliestAgeOrLowestStage,,,109
142
EarliestEonOrLowestEonothem,,,101
143
EarliestEpochOrLowestSeries,,,107
144
EarliestEraOrLowestErathem,,,103
145
EarliestPeriodOrLowestSystem,,,105
146
EndDayOfYear,,,47
147
EstablishmentMeans,,,30
148
EventID,,,41
149
EventRemarks,,,55
150
EventTime,,Brad: OMIT,45
151
FootprintSRS,,,92
152
FootprintSpatialFit,,,93
153
Formation,,,115
154
GeodeticDatum,,,87
155
GeologicalContextID,,,100
156
GeoreferenceProtocol,,,96
157
GeoreferenceRemarks,,,99
158
GeoreferenceSources,,,97
159
GeoreferenceVerificationStatus,,,98
160
GeoreferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
161
GeoreferencedDate,,,95
162
Group,,,114
163
HigherClassification,,,141
164
HigherGeography,,,58
165
HigherGeographyID,,,57
166
HighestBiostratigraphicZone,,,112
167
IdentificationID,,,118
168
IdentificationQualifier,,,124
169
IdentificationReferences,,,121
170
IdentificationRemarks,,,123
171
IdentificationVerificationStatus,,,122
172
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
173
IndividualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
174
InformationWithheld,,,16
175
InstitutionCode,,,
176
Island,,,62
177
IslandGroup,,,61
178
JulianDay,,Brad: OMIT,50
179
LatestAgeOrHighestStage,,,110
180
LatestEonOrHighestEonothem,,,102
181
LatestEpochOrHighestSeries,,,108
182
LatestEraOrHighestErathem,,,104
183
LatestPeriodOrHighestSystem,,,106
184
LifeStage,,,27
185
LithostratigraphicTerms,,,113
186
LocationAccordingTo,,,78
187
LocationID,,,56
188
LocationRemarks,,,79
189
LowestBiostratigraphicZone,,,111
190
MaximumDistanceAboveSurfaceInMeters,,,77
191
MeasurementAccuracy,,,169
192
MeasurementDeterminedBy,,,172
193
MeasurementDeterminedDate,,,171
194
MeasurementID,,,166
195
MeasurementMethod,,,173
196
MeasurementRemarks,,,174
197
MeasurementType,,,167
198
MeasurementUnit,,,170
199
MeasurementValue,,,168
200
Member,,,116
201
MinimumDistanceAboveSurfaceInMeters,,,76
202
Month,,,49
203
Municipality,,,67
204
NameAccordingTo,,,138
205
NameAccordingToID,,,131
206
NamePublishedIn,,,139
207
NamePublishedInID,,,132
208
NamePublishedInYear,,,140
209
NomenclaturalCode,,,155
210
NomenclaturalStatus,,,157
211
OccurrenceRemarks,,,21
212
OccurrenceStatus,,,31
213
OriginalNameUsage,,,137
214
OriginalNameUsageID,,,130
215
OtherCatalogNumbers,,,34
216
OwnerInstitutionCode,,,14
217
ParentNameUsage,,,136
218
ParentNameUsageID,,,129
219
PointRadiusSpatialFit,,,90
220
PreparationType,,Brad: OMIT,32
221
Preparations,,Brad: OMIT,32
222
PreviousCatalogNumber,,?; Brad: OMIT,35
223
PreviousIdentifications,,Brad: OMIT,35
224
RelatedCatalogItem,,Brad: OMIT,161
225
RelatedResourceID,,Brad: OMIT,161
226
RelationshipAccordingTo,,,163
227
RelationshipEstablishedDate,,,164
228
RelationshipOfResource,,Brad: OMIT,162
229
RelationshipRemarks,,,165
230
RelationshipType,,Brad: OMIT,162
231
ReproductiveCondition,,,28
232
ResourceID,,,160
233
ResourceRelationshipID,,,159
234
SamplingEffort,,,43
235
SamplingProtocol,,,42
236
ScientificNameID,,,127
237
StartDayOfYear,,,46
238
Subgenus,,,148
239
TaxonConceptID,,,133
240
TaxonID,,,126
241
TaxonRank,,,151
242
TaxonomicStatus,,,156
243
TimeOfDay,,Brad: OMIT,45
244
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
245
VerbatimCoordinateSystem,,,83
246
VerbatimCoordinates,,,80
247
VerbatimDepth,,,73
248
VerbatimElevation,,,70
249
VerbatimEventDate,,,51
250
VerbatimSRS,,,84
251
VerbatimTaxonRank,,,152
252
VernacularName,,,154
253
WaterBody,,,60
254
Year,,,48
255
acceptedNameUsage,,,135
256
acceptedNameUsageID,,,128
257
associatedMedia,,,36
258
associatedOccurrences,,,38
259
associatedReferences,,,37
260
associatedSequences,,,39
261
associatedTaxa,,,40
262
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
263
bed,,,117
264
behavior,,,29
265
continent,,Brad: OMIT,59
266
countryCode,,,64
267
dataGeneralizations,,,17
268
datasetID,,,10
269
datasetName,,,13
270
day,,Brad: OMIT,50
271
dcterms:accessRights,,,5
272
dcterms:bibliographicCitation,,,6
273
dcterms:language,,,2
274
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
275
dcterms:references,,,7
276
dcterms:rights,,,3
277
dcterms:rightsHolder,,,4
278
dcterms:type,,,0
279
disposition,,,33
280
dynamicProperties,,,18
281
earliestAgeOrLowestStage,,,109
282
earliestEonOrLowestEonothem,,,101
283
earliestEpochOrLowestSeries,,,107
284
earliestEraOrLowestErathem,,,103
285
earliestPeriodOrLowestSystem,,,105
286
endDayOfYear,,,47
287
establishmentMeans,,,30
288
eventID,,,41
289
eventRemarks,,,55
290
eventTime,,Brad: OMIT,45
291
footprintSRS,,,92
292
footprintSpatialFit,,,93
293
formation,,,115
294
geodeticDatum,,,87
295
geologicalContextID,,,100
296
georeferenceProtocol,,,96
297
georeferenceRemarks,,,99
298
georeferenceSources,,,97
299
georeferenceVerificationStatus,,,98
300
georeferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
301
georeferencedDate,,,95
302
group,,,114
303
higherClassification,,,141
304
higherGeography,,,58
305
higherGeographyID,,,57
306
highestBiostratigraphicZone,,,112
307
identificationID,,,118
308
identificationQualifier,,,124
309
identificationReferences,,,121
310
identificationRemarks,,,123
311
identificationVerificationStatus,,,122
312
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
313
individualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
314
informationWithheld,,,16
315
institutionCode,,,
316
island,,,62
317
islandGroup,,,61
318
key,,
319
latestAgeOrHighestStage,,,110
320
latestEonOrHighestEonothem,,,102
321
latestEpochOrHighestSeries,,,108
322
latestEraOrHighestErathem,,,104
323
latestPeriodOrHighestSystem,,,106
324
lifeStage,,,27
325
lithostratigraphicTerms,,,113
326
locationAccordingTo,,,78
327
locationID,,,56
328
locationRemarks,,,79
329
lowestBiostratigraphicZone,,,111
330
maximumDistanceAboveSurfaceInMeters,,,77
331
measurementAccuracy,,,169
332
measurementDeterminedBy,,,172
333
measurementDeterminedDate,,,171
334
measurementID,,,166
335
measurementMethod,,,173
336
measurementRemarks,,,174
337
measurementType,,,167
338
measurementUnit,,,170
339
measurementValue,,,168
340
member,,,116
341
minimumDistanceAboveSurfaceInMeters,,,76
342
month,,,49
343
municipality,,,67
344
nameAccordingTo,,,138
345
nameAccordingToID,,,131
346
namePublishedIn,,,139
347
namePublishedInID,,,132
348
namePublishedInYear,,,140
349
nomenclaturalCode,,,155
350
nomenclaturalStatus,,,157
351
occurrenceRemarks,,,21
352
occurrenceStatus,,,31
353
originalNameUsage,,,137
354
originalNameUsageID,,,130
355
otherCatalogNumbers,,,34
356
ownerInstitutionCode,,,14
357
parentNameUsage,,,136
358
parentNameUsageID,,,129
359
pointRadiusSpatialFit,,,90
360
preparations,,Brad: OMIT,32
361
previousIdentifications,,Brad: OMIT,35
362
relatedResourceID,,Brad: OMIT,161
363
relationshipAccordingTo,,,163
364
relationshipEstablishedDate,,,164
365
relationshipOfResource,,Brad: OMIT,162
366
relationshipRemarks,,,165
367
reproductiveCondition,,,28
368
resourceID,,,160
369
resourceRelationshipID,,,159
370
samplingEffort,,,43
371
samplingProtocol,,,42
372
scientificNameID,,,127
373
startDayOfYear,,,46
374
subgenus,,,148
375
taxonConceptID,,,133
376
taxonID,,,126
377
taxonRank,,,151
378
taxonomicStatus,,,156
379
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
380
verbatimCoordinateSystem,,,83
381
verbatimCoordinates,,,80
382
verbatimDepth,,,73
383
verbatimElevation,,,70
384
verbatimEventDate,,,51
385
verbatimSRS,,,84
386
verbatimTaxonRank,,,152
387
vernacularName,,,154
388
waterBody,,,60
389
year,,,48
inputs/NYBG/test/DwC.specimens.xml.ref
18 18
        <InstitutionCode>NY</InstitutionCode>
19 19
        <JulianDay>233</JulianDay>
20 20
        <Kingdom>Plantae</Kingdom>
21
        <Latitude>-11.80000000</Latitude>
21
        <Latitude>-11.80</Latitude>
22 22
        <Locality>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</Locality>
23
        <Longitude>-71.40000000</Longitude>
23
        <Longitude>-71.40</Longitude>
24 24
        <MaximumElevation>350</MaximumElevation>
25 25
        <MinimumElevation>350</MinimumElevation>
26 26
        <MonthCollected>8</MonthCollected>
......
48 48
        <InstitutionCode>NY</InstitutionCode>
49 49
        <JulianDay>17</JulianDay>
50 50
        <Kingdom>Plantae</Kingdom>
51
        <Latitude>17.40000000</Latitude>
51
        <Latitude>17.40</Latitude>
52 52
        <Locality>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</Locality>
53
        <Longitude>-88.50000000</Longitude>
53
        <Longitude>-88.50</Longitude>
54 54
        <MaximumElevation>15</MaximumElevation>
55 55
        <MinimumElevation>15</MinimumElevation>
56 56
        <MonthCollected>1</MonthCollected>
inputs/NYBG/test/VegBIEN.specimens.xml.ref
26 26
                                            </parent_id>
27 27
                                        </namedplace>
28 28
                                    </namedplace_id>
29
                                    <latitude>-11.80000000</latitude>
30
                                    <longitude>-71.40000000</longitude>
29
                                    <latitude>-11.80</latitude>
30
                                    <longitude>-71.40</longitude>
31 31
                                </locationdetermination>
32 32
                                <locationnarrative>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station; habitat: Floodplain forest</locationnarrative>
33 33
                                <elevation>350.0</elevation>
34 34
                                <elevationrange>0.0</elevationrange>
35
                                <centerlatitude>-11.80000000</centerlatitude>
36
                                <centerlongitude>-71.40000000</centerlongitude>
35
                                <centerlatitude>-11.80</centerlatitude>
36
                                <centerlongitude>-71.40</centerlongitude>
37 37
                            </location>
38 38
                        </location_id>
39 39
                        <obsstartdate>1984-08-20</obsstartdate>
......
121 121
                                            </parent_id>
122 122
                                        </namedplace>
123 123
                                    </namedplace_id>
124
                                    <latitude>17.40000000</latitude>
125
                                    <longitude>-88.50000000</longitude>
124
                                    <latitude>17.40</latitude>
125
                                    <longitude>-88.50</longitude>
126 126
                                </locationdetermination>
127 127
                                <locationnarrative>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</locationnarrative>
128 128
                                <elevation>15.0</elevation>
129 129
                                <elevationrange>0.0</elevationrange>
130
                                <centerlatitude>17.40000000</centerlatitude>
131
                                <centerlongitude>-88.50000000</centerlongitude>
130
                                <centerlatitude>17.40</centerlatitude>
131
                                <centerlongitude>-88.50</centerlongitude>
132 132
                            </location>
133 133
                        </location_id>
134 134
                        <obsstartdate>1994-01-17</obsstartdate>
inputs/NYBG/maps/DwC.specimens.csv
1
"NYBG[DwC]:nybg_raw","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/","Comments"
1
"NYBG[DwC]","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/","Comments"
2 2
"key",,
3
"IdentifiedDate",,
4
"CollectedDate",,
5 3
"Locality","Locality/_merge/1",
6 4
"MinimumElevation","MinimumElevation/_nullIf:[null=.]/value",
7 5
"Notes","Notes/_merge/1",
inputs/NYBG/maps/DwC.specimens.full.csv
1
NYBG[DwC]:nybg_raw,"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",Comments
1
NYBG[DwC],"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",Comments
2 2
AcceptedNameUsage,AcceptedNameUsage
3 3
AcceptedNameUsageID,AcceptedNameUsageID
4 4
AssociatedMedia,AssociatedMedia
......
12 12
BoundingBox,BoundingBox
13 13
CatalogNumber,CatalogNumber
14 14
Class,Class
15
CollectedDate,CollectedDate
15 16
CollectionCode,CollectionCode
16 17
CollectionID,CollectionID
17 18
Collector,Collector
......
83 84
IdentificationRemarks,IdentificationRemarks
84 85
IdentificationVerificationStatus,IdentificationVerificationStatus
85 86
IdentifiedBy,IdentifiedBy
87
IdentifiedDate,IdentifiedDate
86 88
IndividualCount,IndividualCount
87 89
IndividualID,IndividualID
88 90
InformationWithheld,InformationWithheld
......
384 386
vernacularName,vernacularName
385 387
waterBody,waterBody
386 388
year,year
387
CollectedDate,,
388
IdentifiedDate,,
389 389
key,,
inputs/NYBG/maps/VegBIEN.specimens.csv
1
NYBG[DwC]:nybg_raw,VegBIEN:/specimenreplicate,Comments,Order
1
NYBG[DwC],VegBIEN:/specimenreplicate,Comments,Order
2 2
CoordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
3 3
coordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
4 4
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
......
48 48
MonthCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,44
49 49
YearCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,44
50 50
eventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/2",,44
51
CollectedDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/3",,44
51 52
DateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value,,120
52 53
dateIdentified/_alt,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping,120
53 54
DayIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,120
54 55
MonthIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,120
55 56
YearIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,120
56 57
dateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,,120
58
IdentifiedDate,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,,120
57 59
IdentifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
58 60
identifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
59 61
ScientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
......
118 120
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
119 121
Bed,,,117
120 122
Behavior,,,29
121
CollectedDate,,
122 123
Continent,,Brad: OMIT,59
123 124
ContinentOcean,,Brad: OMIT,59
124 125
CountryCode,,,64
......
168 169
IdentificationReferences,,,121
169 170
IdentificationRemarks,,,123
170 171
IdentificationVerificationStatus,,,122
171
IdentifiedDate,,
172 172
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
173 173
IndividualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
174 174
InformationWithheld,,,16

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