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Revision 1437

Added by Aaron Marcuse-Kubitza almost 13 years ago

Renamed inputs/MOBOT to inputs/MO to match herbarium code

View differences:

inputs/MOBOT/test/DwC.specimens.xml.ref
1 
<?xml version="1.0" ?>
2 
<DwC xmlns:dcterms="http://purl.org/dc/terms/">
3 
    <list id="0">
4 
        <institutionID>MOBOT</institutionID>
5 
        <BasisOfRecord>S</BasisOfRecord>
6 
        <CatalogNumber>1</CatalogNumber>
7 
        <CollectionCode>Tropicos</CollectionCode>
8 
        <Collector>Wiggins</Collector>
9 
        <CollectorNumber>10572</CollectorNumber>
10 
        <ContinentOcean>America</ContinentOcean>
11 
        <Country>Ecuador</Country>
12 
        <DateLastModified>2008-05-27 22:02:17.713000000</DateLastModified>
13 
        <DayCollected>0</DayCollected>
14 
        <Family>Thelypteridaceae</Family>
15 
        <Genus>Thelypteris</Genus>
16 
        <InstitutionCode>MO</InstitutionCode>
17 
        <Kingdom>Plant</Kingdom>
18 
        <MonthCollected>0</MonthCollected>
19 
        <ScientificName>Thelypteris minutula C.V. Morton</ScientificName>
20 
        <ScientificNameAuthor>C.V. Morton</ScientificNameAuthor>
21 
        <Species>minutula</Species>
22 
        <StateProvince>Carchi</StateProvince>
23 
        <YearCollected>0</YearCollected>
24 
    </list>
25 
    <list id="1">
26 
        <institutionID>MOBOT</institutionID>
27 
        <BasisOfRecord>S</BasisOfRecord>
28 
        <CatalogNumber>2</CatalogNumber>
29 
        <CollectedDate>1985-10-29</CollectedDate>
30 
        <CollectionCode>Tropicos</CollectionCode>
31 
        <Collector>J.D. &amp; E.G. Chapman</Collector>
32 
        <CollectorNumber>6723</CollectorNumber>
33 
        <ContinentOcean>Africa</ContinentOcean>
34 
        <Country>Malawi</Country>
35 
        <DateLastModified>2008-05-27 22:02:17.713000000</DateLastModified>
36 
        <DayCollected>29</DayCollected>
37 
        <Family>Polypodiaceae</Family>
38 
        <Genus>Polypodium</Genus>
39 
        <IndividualCount>1</IndividualCount>
40 
        <InstitutionCode>MO</InstitutionCode>
41 
        <Kingdom>Plant</Kingdom>
42 
        <Locality>Foot of Mt. Mulanje along the Nakholu stream just aboe Lauderdale Forest.</Locality>
43 
        <MinimumElevation>800</MinimumElevation>
44 
        <MonthCollected>10</MonthCollected>
45 
        <ScientificName>Polypodium polypodioides subsp. ecklonii (Kunze) Schelpe</ScientificName>
46 
        <ScientificNameAuthor>(Kunze) Schelpe</ScientificNameAuthor>
47 
        <Species>polypodioides</Species>
48 
        <StateProvince>Southern</StateProvince>
49 
        <Subspecies>ecklonii</Subspecies>
50 
        <YearCollected>1985</YearCollected>
51 
    </list>
52 
</DwC>
inputs/MOBOT/test/VegBIEN.specimens.xml.ref
1 
<?xml version="1.0" ?>
2 
<VegBIEN>
3 
    <specimenreplicate id="0">
4 
        <taxonoccurrence_id>
5 
            <taxonoccurrence>
6 
                <locationevent_id>
7 
                    <locationevent>
8 
                        <location_id>
9 
                            <location>
10 
                                <locationdetermination>
11 
                                    <namedplace_id>
12 
                                        <namedplace>
13 
                                            <rank>stateProvince</rank>
14 
                                            <placename>Carchi</placename>
15 
                                            <parent_id>
16 
                                                <namedplace>
17 
                                                    <rank>country</rank>
18 
                                                    <placename>Ecuador</placename>
19 
                                                </namedplace>
20 
                                            </parent_id>
21 
                                        </namedplace>
22 
                                    </namedplace_id>
23 
                                </locationdetermination>
24 
                            </location>
25 
                        </location_id>
26 
                        <obsstartdate/>
27 
                        <obsenddate/>
28 
                    </locationevent>
29 
                </locationevent_id>
30 
                <taxondetermination>
31 
                    <role>identifier</role>
32 
                    <isoriginal>true</isoriginal>
33 
                    <iscurrent>true</iscurrent>
34 
                    <plantconcept_id>
35 
                        <plantconcept>
36 
                            <plantname_id>
37 
                                <plantname>
38 
                                    <rank>binomial</rank>
39 
                                    <plantname>Thelypteris minutula C.V. Morton</plantname>
40 
                                    <parent_id>
41 
                                        <plantname>
42 
                                            <rank>authority</rank>
43 
                                            <plantname>C.V. Morton</plantname>
44 
                                            <parent_id>
45 
                                                <plantname>
46 
                                                    <rank>species</rank>
47 
                                                    <plantname>minutula</plantname>
48 
                                                    <parent_id>
49 
                                                        <plantname>
50 
                                                            <rank>genus</rank>
51 
                                                            <plantname>Thelypteris</plantname>
52 
                                                            <parent_id>
53 
                                                                <plantname>
54 
                                                                    <rank>family</rank>
55 
                                                                    <plantname>Thelypteridaceae</plantname>
56 
                                                                    <parent_id>
57 
                                                                        <plantname>
58 
                                                                            <rank>kingdom</rank>
59 
                                                                            <plantname>Plant</plantname>
60 
                                                                        </plantname>
61 
                                                                    </parent_id>
62 
                                                                </plantname>
63 
                                                            </parent_id>
64 
                                                        </plantname>
65 
                                                    </parent_id>
66 
                                                </plantname>
67 
                                            </parent_id>
68 
                                        </plantname>
69 
                                    </parent_id>
70 
                                </plantname>
71 
                            </plantname_id>
72 
                        </plantconcept>
73 
                    </plantconcept_id>
74 
                </taxondetermination>
75 
                <verbatimcollectorname>Wiggins</verbatimcollectorname>
76 
            </taxonoccurrence>
77 
        </taxonoccurrence_id>
78 
        <collectioncode_dwc>Tropicos</collectioncode_dwc>
79 
        <datasource_id><party><organizationname>MOBOT</organizationname></party></datasource_id>
80 
        <catalognumber_dwc>1</catalognumber_dwc>
81 
        <collectionnumber>10572</collectionnumber>
82 
    </specimenreplicate>
83 
    <specimenreplicate id="1">
84 
        <taxonoccurrence_id>
85 
            <taxonoccurrence>
86 
                <locationevent_id>
87 
                    <locationevent>
88 
                        <location_id>
89 
                            <location>
90 
                                <locationdetermination>
91 
                                    <namedplace_id>
92 
                                        <namedplace>
93 
                                            <rank>stateProvince</rank>
94 
                                            <placename>Southern</placename>
95 
                                            <parent_id>
96 
                                                <namedplace>
97 
                                                    <rank>country</rank>
98 
                                                    <placename>Malawi</placename>
99 
                                                </namedplace>
100 
                                            </parent_id>
101 
                                        </namedplace>
102 
                                    </namedplace_id>
103 
                                </locationdetermination>
104 
                                <locationnarrative>Foot of Mt. Mulanje along the Nakholu stream just aboe Lauderdale Forest.</locationnarrative>
105 
                                <elevation>800.0</elevation>
106 
                                <elevationrange/>
107 
                            </location>
108 
                        </location_id>
109 
                        <obsstartdate>1985-10-29</obsstartdate>
110 
                        <obsenddate/>
111 
                    </locationevent>
112 
                </locationevent_id>
113 
                <taxondetermination>
114 
                    <role>identifier</role>
115 
                    <isoriginal>true</isoriginal>
116 
                    <iscurrent>true</iscurrent>
117 
                    <plantconcept_id>
118 
                        <plantconcept>
119 
                            <plantname_id>
120 
                                <plantname>
121 
                                    <rank>binomial</rank>
122 
                                    <plantname>Polypodium polypodioides subsp. ecklonii (Kunze) Schelpe</plantname>
123 
                                    <parent_id>
124 
                                        <plantname>
125 
                                            <rank>authority</rank>
126 
                                            <plantname>(Kunze) Schelpe</plantname>
127 
                                            <parent_id>
128 
                                                <plantname>
129 
                                                    <rank>subspecies</rank>
130 
                                                    <plantname>ecklonii</plantname>
131 
                                                    <parent_id>
132 
                                                        <plantname>
133 
                                                            <rank>species</rank>
134 
                                                            <plantname>polypodioides</plantname>
135 
                                                            <parent_id>
136 
                                                                <plantname>
137 
                                                                    <rank>genus</rank>
138 
                                                                    <plantname>Polypodium</plantname>
139 
                                                                    <parent_id>
140 
                                                                        <plantname>
141 
                                                                            <rank>family</rank>
142 
                                                                            <plantname>Polypodiaceae</plantname>
143 
                                                                            <parent_id>
144 
                                                                                <plantname>
145 
                                                                                    <rank>kingdom</rank>
146 
                                                                                    <plantname>Plant</plantname>
147 
                                                                                </plantname>
148 
                                                                            </parent_id>
149 
                                                                        </plantname>
150 
                                                                    </parent_id>
151 
                                                                </plantname>
152 
                                                            </parent_id>
153 
                                                        </plantname>
154 
                                                    </parent_id>
155 
                                                </plantname>
156 
                                            </parent_id>
157 
                                        </plantname>
158 
                                    </parent_id>
159 
                                </plantname>
160 
                            </plantname_id>
161 
                        </plantconcept>
162 
                    </plantconcept_id>
163 
                </taxondetermination>
164 
                <verbatimcollectorname>J.D. &amp; E.G. Chapman</verbatimcollectorname>
165 
            </taxonoccurrence>
166 
        </taxonoccurrence_id>
167 
        <collectioncode_dwc>Tropicos</collectioncode_dwc>
168 
        <datasource_id><party><organizationname>MOBOT</organizationname></party></datasource_id>
169 
        <catalognumber_dwc>2</catalognumber_dwc>
170 
        <collectionnumber>6723</collectionnumber>
171 
    </specimenreplicate>
172 
</VegBIEN>
inputs/MOBOT/test/import.specimens.out.ref
1 
Inserted 31 new rows into database
inputs/MOBOT/maps/src.join.specimens.csv
1 
MOBOT[DwC]:mo_raw,VegBIEN:/specimenreplicate,Comments,Order
2 
CoordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
3 
coordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
4 
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
5 
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
6 
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
7 
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
8 
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
9 
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
10 
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
11 
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
12 
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
13 
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
14 
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
15 
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
16 
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
17 
VerbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
18 
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
19 
Habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
20 
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
21 
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}",,71
22 
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}",,71
23 
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}",,71
24 
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
25 
MaximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
26 
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
27 
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
28 
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
29 
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
30 
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
31 
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
32 
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
33 
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
34 
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
35 
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
36 
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
37 
MaximumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
38 
MaximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
39 
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
40 
MinimumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
41 
MinimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
42 
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
43 
EventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value",,44
44 
eventDate/_alt,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt",Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44
45 
DayCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44
46 
MonthCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,44
47 
YearCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,44
48 
eventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/2",,44
49 
CollectedDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/3",,44
50 
DateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value,,120
51 
dateIdentified/_alt,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping,120
52 
DayIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,120
53 
MonthIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,120
54 
YearIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,120
55 
dateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,,120
56 
IdentifiedDate,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,,120
57 
IdentifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
58 
identifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
59 
ScientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
60 
scientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
61 
ScientificNameAuthor,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
62 
ScientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
63 
scientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
64 
InfraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
65 
Subspecies,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
66 
infraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
67 
Species,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
68 
SpecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
69 
specificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
70 
Genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
71 
genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
72 
Family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
73 
family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
74 
Order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
75 
order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
76 
Class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
77 
class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
78 
Phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
79 
phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
80 
Kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
81 
kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
82 
Collector,/*_id/taxonoccurrence/verbatimcollectorname,,23
83 
RecordedBy,/*_id/taxonoccurrence/verbatimcollectorname,,23
84 
recordedBy,/*_id/taxonoccurrence/verbatimcollectorname,,23
85 
CollectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
86 
collectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
87 
Sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
88 
sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
89 
FieldNotes,/description/_merge/1,,
90 
Notes,/description/_merge/1,,
91 
fieldNotes,/description/_merge/1,,
92 
Remarks,/description/_merge/2,,158
93 
TaxonRemarks,/description/_merge/2,,158
94 
taxonRemarks,/description/_merge/2,,158
95 
CatalogNumber,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/catalognumber_dwc","Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
96 
catalogNumber,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/catalognumber_dwc","Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
97 
GlobalUniqueIdentifier,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
98 
OccurrenceID,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
99 
occurrenceID,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
100 
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
101 
RecordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
102 
recordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
103 
CollectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
104 
collectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
105 
FieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
106 
fieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
107 
InstitutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
108 
institutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
109 
BasisOfRecord,,** No join mapping for BasisOfRecord **
110 
ContinentOcean,,** No join mapping for ContinentOcean **
111 
ConvertedNotes,,
112 
DateLastModified,,** No join mapping for DateLastModified **
113 
IndividualCount,,** No join mapping for IndividualCount **
114 
InstitutionCode,,** No join mapping for InstitutionCode **
115 
TypeStatus,,** No join mapping for TypeStatus **
inputs/MOBOT/maps/src.specimens.csv
1 
"MOBOT[DwC]:mo_raw"
2 
"CatalogNumber"
3 
"DateLastModified"
4 
"InstitutionCode"
5 
"CollectionCode"
6 
"ScientificName"
7 
"BasisOfRecord"
8 
"Kingdom"
9 
"Family"
10 
"Genus"
11 
"Species"
12 
"Subspecies"
13 
"ScientificNameAuthor"
14 
"IdentifiedBy"
15 
"TypeStatus"
16 
"CollectorNumber"
17 
"Collector"
18 
"DayCollected"
19 
"CollectedDate"
20 
"MonthCollected"
21 
"YearCollected"
22 
"ContinentOcean"
23 
"Country"
24 
"StateProvince"
25 
"County"
26 
"Locality"
27 
"VerbatimLongitude"
28 
"VerbatimLatitude"
29 
"MinimumElevation"
30 
"MaximumElevation"
31 
"IndividualCount"
32 
"Notes"
33 
"ConvertedNotes"
inputs/MOBOT/maps/DwC.specimens.csv
1 
"MOBOT[DwC]:mo_raw","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/","Comments"
2 
"ConvertedNotes",,
inputs/MOBOT/maps/DwC.specimens.full.csv
1 
MOBOT[DwC]:mo_raw,"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",Comments
2 
AcceptedNameUsage,AcceptedNameUsage
3 
AcceptedNameUsageID,AcceptedNameUsageID
4 
AssociatedMedia,AssociatedMedia
5 
AssociatedOccurrences,AssociatedOccurrences
6 
AssociatedReferences,AssociatedReferences
7 
AssociatedSequences,AssociatedSequences
8 
AssociatedTaxa,AssociatedTaxa
9 
BasisOfRecord,BasisOfRecord
10 
Bed,Bed
11 
Behavior,Behavior
12 
BoundingBox,BoundingBox
13 
CatalogNumber,CatalogNumber
14 
Class,Class
15 
CollectedDate,CollectedDate
16 
CollectionCode,CollectionCode
17 
CollectionID,CollectionID
18 
Collector,Collector
19 
CollectorNumber,CollectorNumber
20 
Continent,Continent
21 
ContinentOcean,ContinentOcean
22 
CoordinatePrecision,CoordinatePrecision
23 
CoordinateUncertaintyInMeters,CoordinateUncertaintyInMeters
24 
Country,Country
25 
CountryCode,CountryCode
26 
County,County
27 
DataGeneralizations,DataGeneralizations
28 
DatasetID,DatasetID
29 
DatasetName,DatasetName
30 
DateIdentified,DateIdentified
31 
DateLastModified,DateLastModified
32 
Day,Day
33 
DayCollected,DayCollected
34 
DayIdentified,DayIdentified
35 
Dcterms:accessRights,Dcterms:accessRights
36 
Dcterms:bibliographicCitation,Dcterms:bibliographicCitation
37 
Dcterms:language,Dcterms:language
38 
Dcterms:modified,Dcterms:modified
39 
Dcterms:references,Dcterms:references
40 
Dcterms:rights,Dcterms:rights
41 
Dcterms:rightsHolder,Dcterms:rightsHolder
42 
Dcterms:type,Dcterms:type
43 
DecimalLatitude,DecimalLatitude
44 
DecimalLongitude,DecimalLongitude
45 
Disposition,Disposition
46 
DynamicProperties,DynamicProperties
47 
EarliestAgeOrLowestStage,EarliestAgeOrLowestStage
48 
EarliestEonOrLowestEonothem,EarliestEonOrLowestEonothem
49 
EarliestEpochOrLowestSeries,EarliestEpochOrLowestSeries
50 
EarliestEraOrLowestErathem,EarliestEraOrLowestErathem
51 
EarliestPeriodOrLowestSystem,EarliestPeriodOrLowestSystem
52 
EndDayOfYear,EndDayOfYear
53 
EstablishmentMeans,EstablishmentMeans
54 
EventDate,EventDate
55 
EventID,EventID
56 
EventRemarks,EventRemarks
57 
EventTime,EventTime
58 
Family,Family
59 
FieldNotes,FieldNotes
60 
FieldNumber,FieldNumber
61 
FootprintSRS,FootprintSRS
62 
FootprintSpatialFit,FootprintSpatialFit
63 
FootprintWKT,FootprintWKT
64 
Formation,Formation
65 
Genus,Genus
66 
GeodeticDatum,GeodeticDatum
67 
GeologicalContextID,GeologicalContextID
68 
GeoreferenceProtocol,GeoreferenceProtocol
69 
GeoreferenceRemarks,GeoreferenceRemarks
70 
GeoreferenceSources,GeoreferenceSources
71 
GeoreferenceVerificationStatus,GeoreferenceVerificationStatus
72 
GeoreferencedBy,GeoreferencedBy
73 
GeoreferencedDate,GeoreferencedDate
74 
GlobalUniqueIdentifier,GlobalUniqueIdentifier
75 
Group,Group
76 
Habitat,Habitat
77 
HigherClassification,HigherClassification
78 
HigherGeography,HigherGeography
79 
HigherGeographyID,HigherGeographyID
80 
HighestBiostratigraphicZone,HighestBiostratigraphicZone
81 
IdentificationID,IdentificationID
82 
IdentificationQualifier,IdentificationQualifier
83 
IdentificationReferences,IdentificationReferences
84 
IdentificationRemarks,IdentificationRemarks
85 
IdentificationVerificationStatus,IdentificationVerificationStatus
86 
IdentifiedBy,IdentifiedBy
87 
IdentifiedDate,IdentifiedDate
88 
IndividualCount,IndividualCount
89 
IndividualID,IndividualID
90 
InformationWithheld,InformationWithheld
91 
InfraspecificEpithet,InfraspecificEpithet
92 
InstitutionCode,InstitutionCode
93 
InstitutionID,InstitutionID
94 
Island,Island
95 
IslandGroup,IslandGroup
96 
JulianDay,JulianDay
97 
Kingdom,Kingdom
98 
LatestAgeOrHighestStage,LatestAgeOrHighestStage
99 
LatestEonOrHighestEonothem,LatestEonOrHighestEonothem
100 
LatestEpochOrHighestSeries,LatestEpochOrHighestSeries
101 
LatestEraOrHighestErathem,LatestEraOrHighestErathem
102 
LatestPeriodOrHighestSystem,LatestPeriodOrHighestSystem
103 
Latitude,Latitude
104 
LifeStage,LifeStage
105 
LithostratigraphicTerms,LithostratigraphicTerms
106 
Locality,Locality
107 
LocationAccordingTo,LocationAccordingTo
108 
LocationID,LocationID
109 
LocationRemarks,LocationRemarks
110 
Longitude,Longitude
111 
LowestBiostratigraphicZone,LowestBiostratigraphicZone
112 
MaximumDepth,MaximumDepth
113 
MaximumDepthInMeters,MaximumDepthInMeters
114 
MaximumDistanceAboveSurfaceInMeters,MaximumDistanceAboveSurfaceInMeters
115 
MaximumElevation,MaximumElevation
116 
MaximumElevationInMeters,MaximumElevationInMeters
117 
MeasurementAccuracy,MeasurementAccuracy
118 
MeasurementDeterminedBy,MeasurementDeterminedBy
119 
MeasurementDeterminedDate,MeasurementDeterminedDate
120 
MeasurementID,MeasurementID
121 
MeasurementMethod,MeasurementMethod
122 
MeasurementRemarks,MeasurementRemarks
123 
MeasurementType,MeasurementType
124 
MeasurementUnit,MeasurementUnit
125 
MeasurementValue,MeasurementValue
126 
Member,Member
127 
MinimumDepth,MinimumDepth
128 
MinimumDepthInMeters,MinimumDepthInMeters
129 
MinimumDistanceAboveSurfaceInMeters,MinimumDistanceAboveSurfaceInMeters
130 
MinimumElevation,MinimumElevation
131 
MinimumElevationInMeters,MinimumElevationInMeters
132 
Month,Month
133 
MonthCollected,MonthCollected
134 
MonthIdentified,MonthIdentified
135 
Municipality,Municipality
136 
NameAccordingTo,NameAccordingTo
137 
NameAccordingToID,NameAccordingToID
138 
NamePublishedIn,NamePublishedIn
139 
NamePublishedInID,NamePublishedInID
140 
NamePublishedInYear,NamePublishedInYear
141 
NomenclaturalCode,NomenclaturalCode
142 
NomenclaturalStatus,NomenclaturalStatus
143 
Notes,Notes
144 
OccurrenceID,OccurrenceID
145 
OccurrenceRemarks,OccurrenceRemarks
146 
OccurrenceStatus,OccurrenceStatus
147 
Order,Order
148 
OriginalNameUsage,OriginalNameUsage
149 
OriginalNameUsageID,OriginalNameUsageID
150 
OtherCatalogNumbers,OtherCatalogNumbers
151 
OwnerInstitutionCode,OwnerInstitutionCode
152 
ParentNameUsage,ParentNameUsage
153 
ParentNameUsageID,ParentNameUsageID
154 
Phylum,Phylum
155 
PointRadiusSpatialFit,PointRadiusSpatialFit
156 
PreparationType,PreparationType
157 
Preparations,Preparations
158 
PreviousCatalogNumber,PreviousCatalogNumber
159 
PreviousIdentifications,PreviousIdentifications
160 
RecordNumber,RecordNumber
161 
RecordedBy,RecordedBy
162 
RelatedCatalogItem,RelatedCatalogItem
163 
RelatedResourceID,RelatedResourceID
164 
RelationshipAccordingTo,RelationshipAccordingTo
165 
RelationshipEstablishedDate,RelationshipEstablishedDate
166 
RelationshipOfResource,RelationshipOfResource
167 
RelationshipRemarks,RelationshipRemarks
168 
RelationshipType,RelationshipType
169 
Remarks,Remarks
170 
ReproductiveCondition,ReproductiveCondition
171 
ResourceID,ResourceID
172 
ResourceRelationshipID,ResourceRelationshipID
173 
SamplingEffort,SamplingEffort
174 
SamplingProtocol,SamplingProtocol
175 
ScientificName,ScientificName
176 
ScientificNameAuthor,ScientificNameAuthor
177 
ScientificNameAuthorship,ScientificNameAuthorship
178 
ScientificNameID,ScientificNameID
179 
Sex,Sex
180 
Species,Species
181 
SpecificEpithet,SpecificEpithet
182 
StartDayOfYear,StartDayOfYear
183 
StateProvince,StateProvince
184 
Subgenus,Subgenus
185 
Subspecies,Subspecies
186 
TaxonConceptID,TaxonConceptID
187 
TaxonID,TaxonID
188 
TaxonRank,TaxonRank
189 
TaxonRemarks,TaxonRemarks
190 
TaxonomicStatus,TaxonomicStatus
191 
TimeOfDay,TimeOfDay
192 
TypeStatus,TypeStatus
193 
VerbatimCoordinateSystem,VerbatimCoordinateSystem
194 
VerbatimCoordinates,VerbatimCoordinates
195 
VerbatimDepth,VerbatimDepth
196 
VerbatimElevation,VerbatimElevation
197 
VerbatimEventDate,VerbatimEventDate
198 
VerbatimLatitude,VerbatimLatitude
199 
VerbatimLocality,VerbatimLocality
200 
VerbatimLongitude,VerbatimLongitude
201 
VerbatimSRS,VerbatimSRS
202 
VerbatimTaxonRank,VerbatimTaxonRank
203 
VernacularName,VernacularName
204 
WaterBody,WaterBody
205 
Year,Year
206 
YearCollected,YearCollected
207 
YearIdentified,YearIdentified
208 
acceptedNameUsage,acceptedNameUsage
209 
acceptedNameUsageID,acceptedNameUsageID
210 
associatedMedia,associatedMedia
211 
associatedOccurrences,associatedOccurrences
212 
associatedReferences,associatedReferences
213 
associatedSequences,associatedSequences
214 
associatedTaxa,associatedTaxa
215 
basisOfRecord,basisOfRecord
216 
bed,bed
217 
behavior,behavior
218 
catalogNumber,catalogNumber
219 
class,class
220 
collectionCode,collectionCode
221 
collectionID,collectionID
222 
continent,continent
223 
coordinatePrecision,coordinatePrecision
224 
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters
225 
country,country
226 
countryCode,countryCode
227 
county,county
228 
dataGeneralizations,dataGeneralizations
229 
datasetID,datasetID
230 
datasetName,datasetName
231 
dateIdentified,dateIdentified
232 
dateIdentified/_alt,dateIdentified/_alt
233 
day,day
234 
dcterms:accessRights,dcterms:accessRights
235 
dcterms:bibliographicCitation,dcterms:bibliographicCitation
236 
dcterms:language,dcterms:language
237 
dcterms:modified,dcterms:modified
238 
dcterms:references,dcterms:references
239 
dcterms:rights,dcterms:rights
240 
dcterms:rightsHolder,dcterms:rightsHolder
241 
dcterms:type,dcterms:type
242 
decimalLatitude,decimalLatitude
243 
decimalLongitude,decimalLongitude
244 
disposition,disposition
245 
dynamicProperties,dynamicProperties
246 
earliestAgeOrLowestStage,earliestAgeOrLowestStage
247 
earliestEonOrLowestEonothem,earliestEonOrLowestEonothem
248 
earliestEpochOrLowestSeries,earliestEpochOrLowestSeries
249 
earliestEraOrLowestErathem,earliestEraOrLowestErathem
250 
earliestPeriodOrLowestSystem,earliestPeriodOrLowestSystem
251 
endDayOfYear,endDayOfYear
252 
establishmentMeans,establishmentMeans
253 
eventDate,eventDate
254 
eventDate/_alt,eventDate/_alt
255 
eventID,eventID
256 
eventRemarks,eventRemarks
257 
eventTime,eventTime
258 
family,family
259 
fieldNotes,fieldNotes
260 
fieldNumber,fieldNumber
261 
footprintSRS,footprintSRS
262 
footprintSpatialFit,footprintSpatialFit
263 
footprintWKT,footprintWKT
264 
formation,formation
265 
genus,genus
266 
geodeticDatum,geodeticDatum
267 
geologicalContextID,geologicalContextID
268 
georeferenceProtocol,georeferenceProtocol
269 
georeferenceRemarks,georeferenceRemarks
270 
georeferenceSources,georeferenceSources
271 
georeferenceVerificationStatus,georeferenceVerificationStatus
272 
georeferencedBy,georeferencedBy
273 
georeferencedDate,georeferencedDate
274 
group,group
275 
habitat,habitat
276 
higherClassification,higherClassification
277 
higherGeography,higherGeography
278 
higherGeographyID,higherGeographyID
279 
highestBiostratigraphicZone,highestBiostratigraphicZone
280 
identificationID,identificationID
281 
identificationQualifier,identificationQualifier
282 
identificationReferences,identificationReferences
283 
identificationRemarks,identificationRemarks
284 
identificationVerificationStatus,identificationVerificationStatus
285 
identifiedBy,identifiedBy
286 
individualCount,individualCount
287 
individualID,individualID
288 
informationWithheld,informationWithheld
289 
infraspecificEpithet,infraspecificEpithet
290 
institutionCode,institutionCode
291 
institutionID,institutionID
292 
island,island
293 
islandGroup,islandGroup
294 
kingdom,kingdom
295 
latestAgeOrHighestStage,latestAgeOrHighestStage
296 
latestEonOrHighestEonothem,latestEonOrHighestEonothem
297 
latestEpochOrHighestSeries,latestEpochOrHighestSeries
298 
latestEraOrHighestErathem,latestEraOrHighestErathem
299 
latestPeriodOrHighestSystem,latestPeriodOrHighestSystem
300 
lifeStage,lifeStage
301 
lithostratigraphicTerms,lithostratigraphicTerms
302 
locality,locality
303 
locationAccordingTo,locationAccordingTo
304 
locationID,locationID
305 
locationRemarks,locationRemarks
306 
lowestBiostratigraphicZone,lowestBiostratigraphicZone
307 
maximumDepthInMeters,maximumDepthInMeters
308 
maximumDistanceAboveSurfaceInMeters,maximumDistanceAboveSurfaceInMeters
309 
maximumElevationInMeters,maximumElevationInMeters
310 
measurementAccuracy,measurementAccuracy
311 
measurementDeterminedBy,measurementDeterminedBy
312 
measurementDeterminedDate,measurementDeterminedDate
313 
measurementID,measurementID
314 
measurementMethod,measurementMethod
315 
measurementRemarks,measurementRemarks
316 
measurementType,measurementType
317 
measurementUnit,measurementUnit
318 
measurementValue,measurementValue
319 
member,member
320 
minimumDepthInMeters,minimumDepthInMeters
321 
minimumDistanceAboveSurfaceInMeters,minimumDistanceAboveSurfaceInMeters
322 
minimumElevationInMeters,minimumElevationInMeters
323 
month,month
324 
municipality,municipality
325 
nameAccordingTo,nameAccordingTo
326 
nameAccordingToID,nameAccordingToID
327 
namePublishedIn,namePublishedIn
328 
namePublishedInID,namePublishedInID
329 
namePublishedInYear,namePublishedInYear
330 
nomenclaturalCode,nomenclaturalCode
331 
nomenclaturalStatus,nomenclaturalStatus
332 
occurrenceID,occurrenceID
333 
occurrenceRemarks,occurrenceRemarks
334 
occurrenceStatus,occurrenceStatus
335 
order,order
336 
originalNameUsage,originalNameUsage
337 
originalNameUsageID,originalNameUsageID
338 
otherCatalogNumbers,otherCatalogNumbers
339 
ownerInstitutionCode,ownerInstitutionCode
340 
parentNameUsage,parentNameUsage
341 
parentNameUsageID,parentNameUsageID
342 
phylum,phylum
343 
pointRadiusSpatialFit,pointRadiusSpatialFit
344 
preparations,preparations
345 
previousIdentifications,previousIdentifications
346 
recordNumber,recordNumber
347 
recordedBy,recordedBy
348 
relatedResourceID,relatedResourceID
349 
relationshipAccordingTo,relationshipAccordingTo
350 
relationshipEstablishedDate,relationshipEstablishedDate
351 
relationshipOfResource,relationshipOfResource
352 
relationshipRemarks,relationshipRemarks
353 
reproductiveCondition,reproductiveCondition
354 
resourceID,resourceID
355 
resourceRelationshipID,resourceRelationshipID
356 
samplingEffort,samplingEffort
357 
samplingProtocol,samplingProtocol
358 
scientificName,scientificName
359 
scientificNameAuthorship,scientificNameAuthorship
360 
scientificNameID,scientificNameID
361 
sex,sex
362 
specificEpithet,specificEpithet
363 
startDayOfYear,startDayOfYear
364 
stateProvince,stateProvince
365 
subgenus,subgenus
366 
taxonConceptID,taxonConceptID
367 
taxonID,taxonID
368 
taxonRank,taxonRank
369 
taxonRemarks,taxonRemarks
370 
taxonomicStatus,taxonomicStatus
371 
typeStatus,typeStatus
372 
verbatimCoordinateSystem,verbatimCoordinateSystem
373 
verbatimCoordinates,verbatimCoordinates
374 
verbatimDepth,verbatimDepth
375 
verbatimElevation,verbatimElevation
376 
verbatimEventDate,verbatimEventDate
377 
verbatimLatitude,verbatimLatitude
378 
verbatimLocality,verbatimLocality
379 
verbatimLongitude,verbatimLongitude
380 
verbatimSRS,verbatimSRS
381 
verbatimTaxonRank,verbatimTaxonRank
382 
vernacularName,vernacularName
383 
waterBody,waterBody
384 
year,year
385 
ConvertedNotes,,
inputs/MOBOT/maps/VegBIEN.specimens.csv
1 
MOBOT[DwC]:mo_raw,VegBIEN:/specimenreplicate,Comments,Order
2 
CoordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
3 
coordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
4 
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
5 
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
6 
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
7 
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
8 
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
9 
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
10 
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
11 
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
12 
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
13 
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
14 
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
15 
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
16 
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
17 
VerbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
18 
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
19 
Habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
20 
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
21 
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}",,71
22 
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}",,71
23 
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_rangeStart/value,elevationrange/_range/to/_alt/2/_rangeEnd/value}",,71
24 
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
25 
MaximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
26 
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to/_alt/1}",,72
27 
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
28 
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
29 
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
30 
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
31 
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
32 
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
33 
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
34 
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
35 
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
36 
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
37 
MaximumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
38 
MaximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
39 
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max,,75
40 
MinimumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
41 
MinimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
42 
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min,,74
43 
EventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value",,44
44 
eventDate/_alt,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt",Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44
45 
DayCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44
46 
MonthCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,44
47 
YearCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,44
48 
eventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/2",,44
49 
CollectedDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/3",,44
50 
DateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value,,120
51 
dateIdentified/_alt,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping,120
52 
DayIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,120
53 
MonthIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,120
54 
YearIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,120
55 
dateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,,120
56 
IdentifiedDate,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,,120
57 
IdentifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
58 
identifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
59 
ScientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
60 
scientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
61 
ScientificNameAuthor,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
62 
ScientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
63 
scientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
64 
InfraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
65 
Subspecies,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
66 
infraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
67 
Species,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
68 
SpecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
69 
specificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
70 
Genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
71 
genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
72 
Family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
73 
family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
74 
Order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
75 
order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
76 
Class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
77 
class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
78 
Phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
79 
phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
80 
Kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
81 
kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
82 
Collector,/*_id/taxonoccurrence/verbatimcollectorname,,23
83 
RecordedBy,/*_id/taxonoccurrence/verbatimcollectorname,,23
84 
recordedBy,/*_id/taxonoccurrence/verbatimcollectorname,,23
85 
CollectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
86 
collectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
87 
Sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
88 
sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
89 
FieldNotes,/description/_merge/1,,
90 
Notes,/description/_merge/1,,
91 
fieldNotes,/description/_merge/1,,
92 
Remarks,/description/_merge/2,,158
93 
TaxonRemarks,/description/_merge/2,,158
94 
taxonRemarks,/description/_merge/2,,158
95 
CatalogNumber,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/catalognumber_dwc","Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
96 
catalogNumber,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/catalognumber_dwc","Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
97 
GlobalUniqueIdentifier,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
98 
OccurrenceID,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
99 
occurrenceID,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
100 
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
101 
RecordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
102 
recordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
103 
CollectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
104 
collectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
105 
FieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
106 
fieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
107 
InstitutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
108 
institutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
109 
AcceptedNameUsage,,,135
110 
AcceptedNameUsageID,,,128
111 
AssociatedMedia,,,36
112 
AssociatedOccurrences,,,38
113 
AssociatedReferences,,,37
114 
AssociatedSequences,,,39
115 
AssociatedTaxa,,,40
116 
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
117 
Bed,,,117
118 
Behavior,,,29
119 
Continent,,Brad: OMIT,59
120 
ContinentOcean,,Brad: OMIT,59
121 
ConvertedNotes,,
122 
CountryCode,,,64
123 
DataGeneralizations,,,17
124 
DatasetID,,,10
125 
DatasetName,,,13
126 
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
127 
Day,,Brad: OMIT,50
128 
Dcterms:accessRights,,,5
129 
Dcterms:bibliographicCitation,,,6
130 
Dcterms:language,,,2
131 
Dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
132 
Dcterms:references,,,7
133 
Dcterms:rights,,,3
134 
Dcterms:rightsHolder,,,4
135 
Dcterms:type,,,0
136 
Disposition,,,33
137 
DynamicProperties,,,18
138 
EarliestAgeOrLowestStage,,,109
139 
EarliestEonOrLowestEonothem,,,101
140 
EarliestEpochOrLowestSeries,,,107
141 
EarliestEraOrLowestErathem,,,103
142 
EarliestPeriodOrLowestSystem,,,105
143 
EndDayOfYear,,,47
144 
EstablishmentMeans,,,30
145 
EventID,,,41
146 
EventRemarks,,,55
147 
EventTime,,Brad: OMIT,45
148 
FootprintSRS,,,92
149 
FootprintSpatialFit,,,93
150 
Formation,,,115
151 
GeodeticDatum,,,87
152 
GeologicalContextID,,,100
153 
GeoreferenceProtocol,,,96
154 
GeoreferenceRemarks,,,99
155 
GeoreferenceSources,,,97
156 
GeoreferenceVerificationStatus,,,98
157 
GeoreferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
158 
GeoreferencedDate,,,95
159 
Group,,,114
160 
HigherClassification,,,141
161 
HigherGeography,,,58
162 
HigherGeographyID,,,57
163 
HighestBiostratigraphicZone,,,112
164 
IdentificationID,,,118
165 
IdentificationQualifier,,,124
166 
IdentificationReferences,,,121
167 
IdentificationRemarks,,,123
168 
IdentificationVerificationStatus,,,122
169 
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
170 
IndividualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
171 
InformationWithheld,,,16
172 
InstitutionCode,,,
173 
Island,,,62
174 
IslandGroup,,,61
175 
JulianDay,,Brad: OMIT,50
176 
LatestAgeOrHighestStage,,,110
177 
LatestEonOrHighestEonothem,,,102
178 
LatestEpochOrHighestSeries,,,108
179 
LatestEraOrHighestErathem,,,104
180 
LatestPeriodOrHighestSystem,,,106
181 
LifeStage,,,27
182 
LithostratigraphicTerms,,,113
183 
LocationAccordingTo,,,78
184 
LocationID,,,56
185 
LocationRemarks,,,79
186 
LowestBiostratigraphicZone,,,111
187 
MaximumDistanceAboveSurfaceInMeters,,,77
188 
MeasurementAccuracy,,,169
189 
MeasurementDeterminedBy,,,172
190 
MeasurementDeterminedDate,,,171
191 
MeasurementID,,,166
192 
MeasurementMethod,,,173
193 
MeasurementRemarks,,,174
194 
MeasurementType,,,167
195 
MeasurementUnit,,,170
196 
MeasurementValue,,,168
197 
Member,,,116
198 
MinimumDistanceAboveSurfaceInMeters,,,76
199 
Month,,,49
200 
Municipality,,,67
201 
NameAccordingTo,,,138
202 
NameAccordingToID,,,131
203 
NamePublishedIn,,,139
204 
NamePublishedInID,,,132
205 
NamePublishedInYear,,,140
206 
NomenclaturalCode,,,155
207 
NomenclaturalStatus,,,157
208 
OccurrenceRemarks,,,21
209 
OccurrenceStatus,,,31
210 
OriginalNameUsage,,,137
211 
OriginalNameUsageID,,,130
212 
OtherCatalogNumbers,,,34
213 
OwnerInstitutionCode,,,14
214 
ParentNameUsage,,,136
215 
ParentNameUsageID,,,129
216 
PointRadiusSpatialFit,,,90
217 
PreparationType,,Brad: OMIT,32
218 
Preparations,,Brad: OMIT,32
219 
PreviousCatalogNumber,,?; Brad: OMIT,35
220 
PreviousIdentifications,,Brad: OMIT,35
221 
RelatedCatalogItem,,Brad: OMIT,161
222 
RelatedResourceID,,Brad: OMIT,161
223 
RelationshipAccordingTo,,,163
224 
RelationshipEstablishedDate,,,164
225 
RelationshipOfResource,,Brad: OMIT,162
226 
RelationshipRemarks,,,165
227 
RelationshipType,,Brad: OMIT,162
228 
ReproductiveCondition,,,28
229 
ResourceID,,,160
230 
ResourceRelationshipID,,,159
231 
SamplingEffort,,,43
232 
SamplingProtocol,,,42
233 
ScientificNameID,,,127
234 
StartDayOfYear,,,46
235 
Subgenus,,,148
236 
TaxonConceptID,,,133
237 
TaxonID,,,126
238 
TaxonRank,,,151
239 
TaxonomicStatus,,,156
240 
TimeOfDay,,Brad: OMIT,45
241 
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
242 
VerbatimCoordinateSystem,,,83
243 
VerbatimCoordinates,,,80
244 
VerbatimDepth,,,73
245 
VerbatimElevation,,,70
246 
VerbatimEventDate,,,51
247 
VerbatimSRS,,,84
248 
VerbatimTaxonRank,,,152
249 
VernacularName,,,154
250 
WaterBody,,,60
251 
Year,,,48
252 
acceptedNameUsage,,,135
253 
acceptedNameUsageID,,,128
254 
associatedMedia,,,36
255 
associatedOccurrences,,,38
256 
associatedReferences,,,37
257 
associatedSequences,,,39
258 
associatedTaxa,,,40
259 
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
260 
bed,,,117
261 
behavior,,,29
262 
continent,,Brad: OMIT,59
263 
countryCode,,,64
264 
dataGeneralizations,,,17
265 
datasetID,,,10
266 
datasetName,,,13
267 
day,,Brad: OMIT,50
268 
dcterms:accessRights,,,5
269 
dcterms:bibliographicCitation,,,6
270 
dcterms:language,,,2
271 
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
272 
dcterms:references,,,7
273 
dcterms:rights,,,3
274 
dcterms:rightsHolder,,,4
275 
dcterms:type,,,0
276 
disposition,,,33
277 
dynamicProperties,,,18
278 
earliestAgeOrLowestStage,,,109
279 
earliestEonOrLowestEonothem,,,101
280 
earliestEpochOrLowestSeries,,,107
281 
earliestEraOrLowestErathem,,,103
282 
earliestPeriodOrLowestSystem,,,105
283 
endDayOfYear,,,47
284 
establishmentMeans,,,30
285 
eventID,,,41
286 
eventRemarks,,,55
287 
eventTime,,Brad: OMIT,45
288 
footprintSRS,,,92
289 
footprintSpatialFit,,,93
290 
formation,,,115
291 
geodeticDatum,,,87
292 
geologicalContextID,,,100
293 
georeferenceProtocol,,,96
294 
georeferenceRemarks,,,99
295 
georeferenceSources,,,97
296 
georeferenceVerificationStatus,,,98
297 
georeferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
298 
georeferencedDate,,,95
299 
group,,,114
300 
higherClassification,,,141
301 
higherGeography,,,58
302 
higherGeographyID,,,57
303 
highestBiostratigraphicZone,,,112
304 
identificationID,,,118
305 
identificationQualifier,,,124
306 
identificationReferences,,,121
307 
identificationRemarks,,,123
308 
identificationVerificationStatus,,,122
309 
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
310 
individualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
311 
informationWithheld,,,16
312 
institutionCode,,,
313 
island,,,62
314 
islandGroup,,,61
315 
latestAgeOrHighestStage,,,110
316 
latestEonOrHighestEonothem,,,102
317 
latestEpochOrHighestSeries,,,108
318 
latestEraOrHighestErathem,,,104
319 
latestPeriodOrHighestSystem,,,106
320 
lifeStage,,,27
321 
lithostratigraphicTerms,,,113
322 
locationAccordingTo,,,78
323 
locationID,,,56
324 
locationRemarks,,,79
325 
lowestBiostratigraphicZone,,,111
326 
maximumDistanceAboveSurfaceInMeters,,,77
327 
measurementAccuracy,,,169
328 
measurementDeterminedBy,,,172
329 
measurementDeterminedDate,,,171
330 
measurementID,,,166
331 
measurementMethod,,,173
332 
measurementRemarks,,,174
333 
measurementType,,,167
334 
measurementUnit,,,170
335 
measurementValue,,,168
336 
member,,,116
337 
minimumDistanceAboveSurfaceInMeters,,,76
338 
month,,,49
339 
municipality,,,67
340 
nameAccordingTo,,,138
341 
nameAccordingToID,,,131
342 
namePublishedIn,,,139
343 
namePublishedInID,,,132
344 
namePublishedInYear,,,140
345 
nomenclaturalCode,,,155
346 
nomenclaturalStatus,,,157
347 
occurrenceRemarks,,,21
348 
occurrenceStatus,,,31
349 
originalNameUsage,,,137
350 
originalNameUsageID,,,130
351 
otherCatalogNumbers,,,34
352 
ownerInstitutionCode,,,14
353 
parentNameUsage,,,136
354 
parentNameUsageID,,,129
355 
pointRadiusSpatialFit,,,90
356 
preparations,,Brad: OMIT,32
357 
previousIdentifications,,Brad: OMIT,35
358 
relatedResourceID,,Brad: OMIT,161
359 
relationshipAccordingTo,,,163
360 
relationshipEstablishedDate,,,164
361 
relationshipOfResource,,Brad: OMIT,162
362 
relationshipRemarks,,,165
363 
reproductiveCondition,,,28
364 
resourceID,,,160
365 
resourceRelationshipID,,,159
366 
samplingEffort,,,43
367 
samplingProtocol,,,42
368 
scientificNameID,,,127
369 
startDayOfYear,,,46
370 
subgenus,,,148
371 
taxonConceptID,,,133
372 
taxonID,,,126
373 
taxonRank,,,151
374 
taxonomicStatus,,,156
375 
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
376 
verbatimCoordinateSystem,,,83
377 
verbatimCoordinates,,,80
378 
verbatimDepth,,,73
379 
verbatimElevation,,,70
380 
verbatimEventDate,,,51
381 
verbatimSRS,,,84
382 
verbatimTaxonRank,,,152
383 
vernacularName,,,154
384 
waterBody,,,60
385 
year,,,48
inputs/MO/test/DwC.specimens.xml.ref
1 
<?xml version="1.0" ?>
2 
<DwC xmlns:dcterms="http://purl.org/dc/terms/">
3 
    <list id="0">
4 
        <institutionID>MO</institutionID>
5 
        <BasisOfRecord>S</BasisOfRecord>
6 
        <CatalogNumber>1</CatalogNumber>
7 
        <CollectionCode>Tropicos</CollectionCode>
8 
        <Collector>Wiggins</Collector>
9 
        <CollectorNumber>10572</CollectorNumber>
10 
        <ContinentOcean>America</ContinentOcean>
11 
        <Country>Ecuador</Country>
12 
        <DateLastModified>2008-05-27 22:02:17.713000000</DateLastModified>
13 
        <DayCollected>0</DayCollected>
14 
        <Family>Thelypteridaceae</Family>
15 
        <Genus>Thelypteris</Genus>
16 
        <InstitutionCode>MO</InstitutionCode>
17 
        <Kingdom>Plant</Kingdom>
18 
        <MonthCollected>0</MonthCollected>
19 
        <ScientificName>Thelypteris minutula C.V. Morton</ScientificName>
20 
        <ScientificNameAuthor>C.V. Morton</ScientificNameAuthor>
21 
        <Species>minutula</Species>
22 
        <StateProvince>Carchi</StateProvince>
23 
        <YearCollected>0</YearCollected>
24 
    </list>
25 
    <list id="1">
26 
        <institutionID>MO</institutionID>
27 
        <BasisOfRecord>S</BasisOfRecord>
28 
        <CatalogNumber>2</CatalogNumber>
29 
        <CollectedDate>1985-10-29</CollectedDate>
30 
        <CollectionCode>Tropicos</CollectionCode>
31 
        <Collector>J.D. &amp; E.G. Chapman</Collector>
32 
        <CollectorNumber>6723</CollectorNumber>
33 
        <ContinentOcean>Africa</ContinentOcean>
34 
        <Country>Malawi</Country>
35 
        <DateLastModified>2008-05-27 22:02:17.713000000</DateLastModified>
36 
        <DayCollected>29</DayCollected>
37 
        <Family>Polypodiaceae</Family>
38 
        <Genus>Polypodium</Genus>
39 
        <IndividualCount>1</IndividualCount>
40 
        <InstitutionCode>MO</InstitutionCode>
41 
        <Kingdom>Plant</Kingdom>
42 
        <Locality>Foot of Mt. Mulanje along the Nakholu stream just aboe Lauderdale Forest.</Locality>
43 
        <MinimumElevation>800</MinimumElevation>
44 
        <MonthCollected>10</MonthCollected>
45 
        <ScientificName>Polypodium polypodioides subsp. ecklonii (Kunze) Schelpe</ScientificName>
46 
        <ScientificNameAuthor>(Kunze) Schelpe</ScientificNameAuthor>
47 
        <Species>polypodioides</Species>
48 
        <StateProvince>Southern</StateProvince>
49 
        <Subspecies>ecklonii</Subspecies>
50 
        <YearCollected>1985</YearCollected>
51 
    </list>
52 
</DwC>
inputs/MO/test/VegBIEN.specimens.xml.ref
1 
<?xml version="1.0" ?>
2 
<VegBIEN>
3 
    <specimenreplicate id="0">
4 
        <taxonoccurrence_id>
5 
            <taxonoccurrence>
6 
                <locationevent_id>
7 
                    <locationevent>
8 
                        <location_id>
9 
                            <location>
10 
                                <locationdetermination>
11 
                                    <namedplace_id>
12 
                                        <namedplace>
13 
                                            <rank>stateProvince</rank>
14 
                                            <placename>Carchi</placename>
15 
                                            <parent_id>
16 
                                                <namedplace>
17 
                                                    <rank>country</rank>
18 
                                                    <placename>Ecuador</placename>
19 
                                                </namedplace>
20 
                                            </parent_id>
21 
                                        </namedplace>
22 
                                    </namedplace_id>
23 
                                </locationdetermination>
24 
                            </location>
25 
                        </location_id>
26 
                        <obsstartdate/>
27 
                        <obsenddate/>
28 
                    </locationevent>
29 
                </locationevent_id>
30 
                <taxondetermination>
31 
                    <role>identifier</role>
32 
                    <isoriginal>true</isoriginal>
33 
                    <iscurrent>true</iscurrent>
34 
                    <plantconcept_id>
35 
                        <plantconcept>
36 
                            <plantname_id>
37 
                                <plantname>
38 
                                    <rank>binomial</rank>
39 
                                    <plantname>Thelypteris minutula C.V. Morton</plantname>
40 
                                    <parent_id>
41 
                                        <plantname>
42 
                                            <rank>authority</rank>
43 
                                            <plantname>C.V. Morton</plantname>
44 
                                            <parent_id>
45 
                                                <plantname>
46 
                                                    <rank>species</rank>
47 
                                                    <plantname>minutula</plantname>
48 
                                                    <parent_id>
49 
                                                        <plantname>
50 
                                                            <rank>genus</rank>
51 
                                                            <plantname>Thelypteris</plantname>
52 
                                                            <parent_id>
53 
                                                                <plantname>
54 
                                                                    <rank>family</rank>
55 
                                                                    <plantname>Thelypteridaceae</plantname>
56 
                                                                    <parent_id>
57 
                                                                        <plantname>
58 
                                                                            <rank>kingdom</rank>
59 
                                                                            <plantname>Plant</plantname>
60 
                                                                        </plantname>
61 
                                                                    </parent_id>
62 
                                                                </plantname>
63 
                                                            </parent_id>
64 
                                                        </plantname>
65 
                                                    </parent_id>
66 
                                                </plantname>
67 
                                            </parent_id>
68 
                                        </plantname>
69 
                                    </parent_id>
70 
                                </plantname>
71 
                            </plantname_id>
72 
                        </plantconcept>
73 
                    </plantconcept_id>
74 
                </taxondetermination>
75 
                <verbatimcollectorname>Wiggins</verbatimcollectorname>
76 
            </taxonoccurrence>
77 
        </taxonoccurrence_id>
78 
        <collectioncode_dwc>Tropicos</collectioncode_dwc>
79 
        <datasource_id><party><organizationname>MO</organizationname></party></datasource_id>
80 
        <catalognumber_dwc>1</catalognumber_dwc>
81 
        <collectionnumber>10572</collectionnumber>
82 
    </specimenreplicate>
83 
    <specimenreplicate id="1">
84 
        <taxonoccurrence_id>
85 
            <taxonoccurrence>
86 
                <locationevent_id>
87 
                    <locationevent>
88 
                        <location_id>
89 
                            <location>
90 
                                <locationdetermination>
91 
                                    <namedplace_id>
92 
                                        <namedplace>
93 
                                            <rank>stateProvince</rank>
94 
                                            <placename>Southern</placename>
95 
                                            <parent_id>
96 
                                                <namedplace>
97 
                                                    <rank>country</rank>
98 
                                                    <placename>Malawi</placename>
99 
                                                </namedplace>
100 
                                            </parent_id>
101 
                                        </namedplace>
102 
                                    </namedplace_id>
103 
                                </locationdetermination>
104 
                                <locationnarrative>Foot of Mt. Mulanje along the Nakholu stream just aboe Lauderdale Forest.</locationnarrative>
105 
                                <elevation>800.0</elevation>
106 
                                <elevationrange/>
107 
                            </location>
108 
                        </location_id>
109 
                        <obsstartdate>1985-10-29</obsstartdate>
110 
                        <obsenddate/>
111 
                    </locationevent>
112 
                </locationevent_id>
113 
                <taxondetermination>
114 
                    <role>identifier</role>
115 
                    <isoriginal>true</isoriginal>
116 
                    <iscurrent>true</iscurrent>
117 
                    <plantconcept_id>
118 
                        <plantconcept>
119 
                            <plantname_id>
120 
                                <plantname>
121 
                                    <rank>binomial</rank>
122 
                                    <plantname>Polypodium polypodioides subsp. ecklonii (Kunze) Schelpe</plantname>
123 
                                    <parent_id>
124 
                                        <plantname>
125 
                                            <rank>authority</rank>
126 
                                            <plantname>(Kunze) Schelpe</plantname>
127 
                                            <parent_id>
128 
                                                <plantname>
129 
                                                    <rank>subspecies</rank>
130 
                                                    <plantname>ecklonii</plantname>
131 
                                                    <parent_id>
132 
                                                        <plantname>
133 
                                                            <rank>species</rank>
134 
                                                            <plantname>polypodioides</plantname>
135 
                                                            <parent_id>
136 
                                                                <plantname>
137 
                                                                    <rank>genus</rank>
138 
                                                                    <plantname>Polypodium</plantname>
139 
                                                                    <parent_id>
140 
                                                                        <plantname>
141 
                                                                            <rank>family</rank>
142 
                                                                            <plantname>Polypodiaceae</plantname>
143 
                                                                            <parent_id>
144 
                                                                                <plantname>
145 
                                                                                    <rank>kingdom</rank>
146 
                                                                                    <plantname>Plant</plantname>
147 
                                                                                </plantname>
148 
                                                                            </parent_id>
149 
                                                                        </plantname>
150 
                                                                    </parent_id>
151 
                                                                </plantname>
152 
                                                            </parent_id>
153 
                                                        </plantname>
154 
                                                    </parent_id>
155 
                                                </plantname>
156 
                                            </parent_id>
157 
                                        </plantname>
158 
                                    </parent_id>
159 
                                </plantname>
160 
                            </plantname_id>
161 
                        </plantconcept>
162 
                    </plantconcept_id>
163 
                </taxondetermination>
164 
                <verbatimcollectorname>J.D. &amp; E.G. Chapman</verbatimcollectorname>
165 
            </taxonoccurrence>
166 
        </taxonoccurrence_id>
167 
        <collectioncode_dwc>Tropicos</collectioncode_dwc>
168 
        <datasource_id><party><organizationname>MO</organizationname></party></datasource_id>
169 
        <catalognumber_dwc>2</catalognumber_dwc>
170 
        <collectionnumber>6723</collectionnumber>
171 
    </specimenreplicate>
172 
</VegBIEN>
inputs/MO/test/import.specimens.out.ref
1 
Inserted 31 new rows into database
inputs/MO/maps/src.specimens.csv
1 
"MO[DwC]:mo_raw"
2 
"CatalogNumber"
3 
"DateLastModified"
4 
"InstitutionCode"
5 
"CollectionCode"
6 
"ScientificName"
7 
"BasisOfRecord"
8 
"Kingdom"
9 
"Family"
10 
"Genus"
11 
"Species"
12 
"Subspecies"
13 
"ScientificNameAuthor"
14 
"IdentifiedBy"
15 
"TypeStatus"
16 
"CollectorNumber"
17 
"Collector"
18 
"DayCollected"
19 
"CollectedDate"
20 
"MonthCollected"
21 
"YearCollected"
22 
"ContinentOcean"
23 
"Country"
24 
"StateProvince"
25 
"County"
26 
"Locality"
27 
"VerbatimLongitude"
... This diff was truncated because it exceeds the maximum size that can be displayed.

Also available in: Unified diff