Revision 1451
Added by Aaron Marcuse-Kubitza almost 13 years ago
| inputs/GBIF/src/GBIF.specimens.txt.header | ||
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0 1 Collector 3 LatestDateCollected InstitutionCD CollectionCD CatalogNO LastDateModified IdentifiedBy ScientificNameOriginal AuthorOfScientificName ScientificName GBIFFamilyOriginal Family GBIFGenusOriginal Genus Country Locality County StateProvince DecimalLatitude VerbatimLatitude DecimalLongitude VerbatimLongitude 25 MinimumElevationInMeter MaximumElevationInMeter SpecificEpithet InfraspecificEpithet |
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| inputs/GBIF/src/GBIF.0.header.specimens.txt | ||
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| 1 |
0 1 Collector 3 LatestDateCollected InstitutionCD CollectionCD CatalogNO LastDateModified IdentifiedBy ScientificNameOriginal AuthorOfScientificName ScientificName GBIFFamilyOriginal Family GBIFGenusOriginal Genus Country Locality County StateProvince DecimalLatitude VerbatimLatitude DecimalLongitude VerbatimLongitude 25 MinimumElevationInMeter MaximumElevationInMeter SpecificEpithet InfraspecificEpithet |
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| inputs/input.Makefile | ||
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| 135 | 135 |
inputFiles := $(wildcard $(exts:%=src/*.%)) |
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| 137 | 137 |
+maps = $(filter maps/% $(mappings)/%,$(+_)) |
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<in = $(firstword $(filter-out $(+maps),$(+_)) $(wildcard $(exts:%=src/*.$*.%))) |
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inputs = $(strip $(wildcard $(<in).header) $(<in)) |
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map = $(if $(inputs),$(bin)/with_cat $(inputs) -- ,$(if $(mapEnv),env $(mapEnv)\ |
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,$(error No input file src/*.$*.{$(exts)})))$(root)/map $(+maps)
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<in = $(firstword $(filter-out $(+maps),$(+_))) |
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srcs = $(sort $(wildcard $(exts:%=src/*.$*.%))) |
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map = $(if $(<in),<$(<in),\ |
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$(if $(srcs),$(bin)/with_cat_csv $(srcs) --,\ |
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$(if $(mapEnv),env $(mapEnv),\ |
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$(error No input file src/*.$*.{$(exts)}))))\
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$(root)/map $(+maps) |
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| 142 | 145 |
map2db = env out_database=vegbien $(map) |
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| 144 | 147 |
##### Import to VegBIEN |
Also available in: Unified diff
input.Makefile: Mapping: Support multiple segments of a source table flat file. Use with_cat_csv if flat file segment(s) are available; otherwise use the input file in $+ or the input database, if any. Don't look for an explicit CSV header file because it can now be handled as the first segment if appropriately named.