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Name Size Revision Age Author Comment
  _archive 258 about 13 years Aaron Marcuse-Kubitza Moved pre-BIEN 3 files into _archive folder
  bin 1450 almost 13 years Aaron Marcuse-Kubitza Added with_cat_csv
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 1455 almost 13 years Aaron Marcuse-Kubitza mappings: DwC: Generate case-insensitive map of...
  lib 1446 almost 13 years Aaron Marcuse-Kubitza csvs.py: Added csv modifications to compare Dia...
  mappings 1452 almost 13 years Aaron Marcuse-Kubitza mappings: DwC: Generate case-insensitive map of...
  schemas 1436 almost 13 years Aaron Marcuse-Kubitza Regenerated vegbien.ERD exports
  to_do 811 almost 13 years Aaron Marcuse-Kubitza Added to_do/milestones.doc
Makefile 6.46 KB 1375 almost 13 years Aaron Marcuse-Kubitza root Makefile: python-Linux: Added pymetrics
README.TXT 1.64 KB 1384 almost 13 years Aaron Marcuse-Kubitza README.TXT: Tell user to `disown -h %1` after r...
map 867 Bytes 1299 almost 13 years Aaron Marcuse-Kubitza map: On nimoy, use bien2_staging unless otherwi...

Latest revisions

# Date Author Comment
1455 03/18/2012 05:53 PM Aaron Marcuse-Kubitza

mappings: DwC: Generate case-insensitive map of DwC1 and DwC2 together, rather than just DwC2. DwC1-DwC2.specimens.csv: Make input columns lowercase so that case-insensitization will work properly.
1454 03/18/2012 05:52 PM Aaron Marcuse-Kubitza

inputs/SpeciesLink: Switched to using flat files instead of DB
1453 03/18/2012 05:52 PM Aaron Marcuse-Kubitza

inputs/MO: Switched to using flat files instead of DB
1452 03/18/2012 05:51 PM Aaron Marcuse-Kubitza

mappings: DwC: Generate case-insensitive map of DwC1 and DwC2 together, rather than just DwC2. DwC1-DwC2.specimens.csv: Make input columns lowercase so that case-insensitization will work properly.
1451 03/18/2012 04:55 PM Aaron Marcuse-Kubitza

input.Makefile: Mapping: Support multiple segments of a source table flat file. Use with_cat_csv if flat file segment(s) are available; otherwise use the input file in $+ or the input database, if any. Don't look for an explicit CSV header file because it can now be handled as the first segment if appropriately named.
1450 03/18/2012 04:50 PM Aaron Marcuse-Kubitza

Added with_cat_csv
1449 03/18/2012 04:50 PM Aaron Marcuse-Kubitza

with_cat: Added support for custom cat command in env var
1448 03/18/2012 04:49 PM Aaron Marcuse-Kubitza

cat_csv: Abort if output stream closed instead of exiting with an IOError
1447 03/18/2012 04:16 PM Aaron Marcuse-Kubitza

cat_csv: Ignore any duplicated headers instead of requiring each CSV to have a header identical to the first. Rewrote to pass the CSVs through as lines rather than parsing each row. Because the CSVs are not parsed, checked that all CSVs have the same dialect.
1446 03/18/2012 04:14 PM Aaron Marcuse-Kubitza

csvs.py: Added csv modifications to compare Dialect instances

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