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root/trunk @ 14598

Name Size Revision Age Author Comment
  BIEN2 12779 almost 11 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  _archive 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 14301 over 10 years Aaron Marcuse-Kubitza added derived/TNRS/Morphospecies and scope.eml*...
  backups 14547 over 10 years Aaron Marcuse-Kubitza backups/TNRS.*: removed no longer needed old TN...
  bin 14575 over 10 years Aaron Marcuse-Kubitza bin/tnrs_client: added env var to configure use...
  config 14546 over 10 years Aaron Marcuse-Kubitza added config/phpMyAdmin/ symlink to schemas/Veg...
  derived 14298 over 10 years Aaron Marcuse-Kubitza added derived/TNRS/Morphospecies and scope.eml*...
  downloads 13537 over 10 years Aaron Marcuse-Kubitza added downloads/
  exports 14587 over 10 years Aaron Marcuse-Kubitza exports/: svn:ignore: added *.gz
  inputs 14588 over 10 years Aaron Marcuse-Kubitza bugfix: inputs/input.Makefile: %/install: $(exp...
  issues 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 14598 over 10 years Aaron Marcuse-Kubitza lib/tnrs.py: single_tnrs_request(): JSON mode: ...
  mappings 14454 over 10 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: prefixed ...
  planning 14469 over 10 years Aaron Marcuse-Kubitza planning/meetings/BIEN conference call availabi...
  schemas 14528 over 10 years Aaron Marcuse-Kubitza fix: schemas/util.sql: contained_within_approx(...
  validation 13963 over 10 years Aaron Marcuse-Kubitza validation/completeness/BIENDatesPopulated.xlsx...
  web 14529 over 10 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
  wiki 13787 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: use lowercase when there is a s...
.htaccess 326 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.17 KB 13787 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: use lowercase when there is a s...
Makefile 12.9 KB 14068 over 10 years Aaron Marcuse-Kubitza bugfix: /Makefile: postgres_restart-*: argument...
README.TXT 36.1 KB 14581 over 10 years Aaron Marcuse-Kubitza /README.TXT: to backup files not in Time Machin...
fix_perms 97 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 518 Bytes 12968 over 10 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
unmapped_terms.csv 33 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
14598 08/26/2014 07:57 PM Aaron Marcuse-Kubitza

lib/tnrs.py: single_tnrs_request(): JSON mode: implemented output of JSON data
14597 08/26/2014 07:53 PM Aaron Marcuse-Kubitza

lib/tnrs.py: single_tnrs_request(): factored out wrapping in TnrsOutputStream, since this is done for both modes
14596 08/26/2014 07:47 PM Aaron Marcuse-Kubitza

fix: lib/tnrs.py: JSON mode: TSV export columns: need to translate these to JSON column names before they can be used with the JSON data
14595 08/26/2014 07:44 PM Aaron Marcuse-Kubitza

lib/csvs.py: added JsonReader, which reads parsed JSON data as row tuples
14594 08/26/2014 07:43 PM Aaron Marcuse-Kubitza

lib/csvs.py: added row_dict_to_list(), which translates a CSV dict-based row to a list-based one
14593 08/26/2014 07:43 PM Aaron Marcuse-Kubitza

lib/csvs.py: RowNumFilter: added support for filtering the header row as well
14592 08/26/2014 07:42 PM Aaron Marcuse-Kubitza

lib/csvs.py: ColInsertFilter: added support for filtering the header row as well
14591 08/26/2014 05:12 PM Aaron Marcuse-Kubitza

lib/csvs.py: InputRewriter: documented that this is also a stream (in addition to inheriting from StreamFilter)
14590 08/26/2014 05:11 PM Aaron Marcuse-Kubitza

bugfix: lib/csvs.py: InputRewriter: accept a reader, as would be expected, instead of a custom stream whose lines are tuples
14589 08/26/2014 05:08 PM Aaron Marcuse-Kubitza

fix: lib/sql_io.py: append_csv(): use new csvs.ProgressInputFilter instead of streams.ProgressInputStream(csvs.StreamFilter(__)), so that the input to csvs.InputRewriter is a reader, not a stream. this avoids the need for csvs.InputRewriter to accept a stream whose lines are tuples, instead of the expected reader.

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