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root/trunk @ 14623

Name Size Revision Age Author Comment
  BIEN2 12779 almost 11 years Aaron Marcuse-Kubitza *{.sh,run}: use new begin_target instead of `ec...
  _archive 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  _license 14301 over 10 years Aaron Marcuse-Kubitza added derived/TNRS/Morphospecies and scope.eml*...
  backups 14547 over 10 years Aaron Marcuse-Kubitza backups/TNRS.*: removed no longer needed old TN...
  bin 14622 over 10 years Aaron Marcuse-Kubitza lib/tnrs.py single_tnrs_request(), bin/tnrs_cli...
  config 14619 over 10 years Aaron Marcuse-Kubitza config/VirtualBox_VMs/vegbiendev/README.TXT: ~/...
  derived 14298 over 10 years Aaron Marcuse-Kubitza added derived/TNRS/Morphospecies and scope.eml*...
  downloads 13537 over 10 years Aaron Marcuse-Kubitza added downloads/
  exports 14587 over 10 years Aaron Marcuse-Kubitza exports/: svn:ignore: added *.gz
  inputs 14588 over 10 years Aaron Marcuse-Kubitza bugfix: inputs/input.Makefile: %/install: $(exp...
  issues 12124 almost 11 years Aaron Marcuse-Kubitza **/LICENSE.TXT: corrected "it recommended" to "...
  lib 14622 over 10 years Aaron Marcuse-Kubitza lib/tnrs.py single_tnrs_request(), bin/tnrs_cli...
  mappings 14454 over 10 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: prefixed ...
  planning 14610 over 10 years Aaron Marcuse-Kubitza planning/meetings/BIEN conference call availabi...
  schemas 14611 over 10 years Aaron Marcuse-Kubitza schemas/public_.sql: views that use view_full_o...
  validation 13963 over 10 years Aaron Marcuse-Kubitza validation/completeness/BIENDatesPopulated.xlsx...
  web 14529 over 10 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
  wiki 13787 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: use lowercase when there is a s...
.htaccess 326 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_filter.upload 33 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
.rsync_ignore 12 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
LICENSE.TXT 6.17 KB 13787 over 10 years Aaron Marcuse-Kubitza **/LICENSE.TXT: use lowercase when there is a s...
Makefile 12.9 KB 14068 over 10 years Aaron Marcuse-Kubitza bugfix: /Makefile: postgres_restart-*: argument...
README.TXT 36.7 KB 14623 over 10 years Aaron Marcuse-Kubitza /README.TXT: to back up the local machine's har...
fix_perms 97 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
map 1001 Bytes 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
new_terms.csv 80.2 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
run 518 Bytes 12968 almost 11 years Aaron Marcuse-Kubitza *{.sh,run}: runscript targets: use begin_target...
unmapped_terms.csv 33 KB 11970 almost 11 years Aaron Marcuse-Kubitza moved everything into /trunk/ to create the sta...
  • svn:ignore: extern

Latest revisions

# Date Author Comment
14623 08/28/2014 11:42 PM Aaron Marcuse-Kubitza

/README.TXT: to back up the local machine's hard drive: also exclude *-files indicating the (differing) retention statuses of the partitions involved
14622 08/28/2014 08:13 PM Aaron Marcuse-Kubitza

lib/tnrs.py single_tnrs_request(), bin/tnrs_client: use_tnrs_export: default to False because this mode uses incorrect selected matches (vegpath.org/issues/943), and the JSON mode that fixes this is now available
14621 08/28/2014 08:05 PM Aaron Marcuse-Kubitza

bin/tnrs_db: tnrs.tnrs_request() call: explicitly set use_tnrs_export=True so that this continues to work if the default value is changed
14620 08/28/2014 07:57 PM Aaron Marcuse-Kubitza

bugfix: lib/csvs.py: JsonReader: need to pass col_order to row_dict_to_list_reader
14619 08/28/2014 07:43 PM Aaron Marcuse-Kubitza

config/VirtualBox_VMs/vegbiendev/README.TXT: ~/Documents/BIEN/vegbiendev.2014-2-2_1-07-32PT.+VirtualBox_changes/: renamed to vegbiendev.2014-2-2_1-07-32PT.VirtualBox/ to make clear that this is the VirtualBox version of vegbiendev
14618 08/28/2014 07:12 PM Aaron Marcuse-Kubitza

bugfix: lib/tnrs.py: JSON output: need to stringify arrays so they match what is output in TSV-export mode
14617 08/28/2014 07:10 PM Aaron Marcuse-Kubitza

lib/csvs.py: JsonReader: added support for values that are arrays
14616 08/28/2014 07:05 PM Aaron Marcuse-Kubitza

lib/csvs.py: MultiFilter: inherit from WrapReader instead of Filter to avoid needing to define a no-op filter_() function
14615 08/28/2014 06:49 PM Aaron Marcuse-Kubitza

bugfix: lib/csvs.py: row_dict_to_list_reader: need to override next() directly instead of just using Filter, because Filter doesn't support returning multiple rows for one input row (in this case, prepending a header row). this caused the 1st data row to be missing.
14614 08/28/2014 06:47 PM Aaron Marcuse-Kubitza

lib/csvs.py: Filter: inherit from WrapReader, which separates out the CSV-reader API code

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