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root/trunk/inputs @ 14666

Name Size Revision Age Author Comment
  .IRMNG 14038 over 10 years Aaron Marcuse-Kubitza fix: inputs/.IRMNG/*/: added _no_import because...
  .IUCN 13972 over 10 years Aaron Marcuse-Kubitza fix: inputs/IUCN/: renamed to inputs/.IUCN/ (se...
  .NCBI 14036 over 10 years Aaron Marcuse-Kubitza bugfix: added nodes/_no_import, because the NCB...
  .TNRS 14492 about 10 years Aaron Marcuse-Kubitza inputs/.TNRS/schema.sql: taxon_match: added tax...
  .archive 11717 almost 11 years Aaron Marcuse-Kubitza inputs/: removed SALVIAS-CSV, because this is a...
  .geoscrub 14579 about 10 years Aaron Marcuse-Kubitza inputs/.geoscrub/geoscrub_output/run: documente...
  .herbaria 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  .newWorld 13971 over 10 years Aaron Marcuse-Kubitza fix: inputs/newWorld/: renamed to inputs/.newWo...
  ACAD 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  ARIZ 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  BRIT 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  CTFS 13763 over 10 years Aaron Marcuse-Kubitza *: use vegbiendev:/home/bien instead of /home/b...
  CVS 14633 about 10 years Aaron Marcuse-Kubitza added inputs/CVS/verify/Review of CVS data in B...
  FIA 14454 over 10 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: prefixed ...
  GBIF 14075 over 10 years Aaron Marcuse-Kubitza inputs/GBIF/raw_occurrence_record_plants/test.x...
  HIBG 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  HVAA 14490 about 10 years Aaron Marcuse-Kubitza fix: inputs/HVAA/Specimen/postprocess.sql, map....
  JBM 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  MO 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  MT 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  Madidi 13964 over 10 years Aaron Marcuse-Kubitza fix: inputs/Madidi/LocationObservation/postproc...
  NCU 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  NVS 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  NY 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  QFA 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  REMIB 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  SALVIAS 14090 over 10 years Aaron Marcuse-Kubitza inputs/SALVIAS/Source/header.csv: updated
  SpeciesLink 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TEAM 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TEX 14454 over 10 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: prefixed ...
  TRT 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TRTE 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  TurboVeg 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  U 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  UBC 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  UNCC 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  VASCAN 13986 over 10 years Aaron Marcuse-Kubitza fix: inputs/VASCAN/Source/map.csv: observationG...
  VegBank 14078 over 10 years Aaron Marcuse-Kubitza inputs/VegBank/stemlocation_/test.xml.ref: updated
  WIN 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  XAL 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  analytical_db 13417 over 10 years Aaron Marcuse-Kubitza bugfix: inputs/analytical_db/: need dummy table...
  bien2_traits 13940 over 10 years Aaron Marcuse-Kubitza fix: inputs/bien2_traits/TraitObservation/map.c...
  bien_web 13401 over 10 years Aaron Marcuse-Kubitza inputs/input.Makefile: add: verify/: also svn:i...
  test_taxonomic_names 14366 over 10 years Aaron Marcuse-Kubitza fix: inputs/.TNRS/schema.sql: taxon_match: adde...
.htaccess 334 Bytes 8513 over 11 years Aaron Marcuse-Kubitza added .htaccess files for inputs/, schemas/ bec...
.rsync_filter.download 18 Bytes 10043 over 11 years Aaron Marcuse-Kubitza inputs/.rsync_ignore: test*.xml: turn on syncin...
.rsync_filter.frenzy.download 24 Bytes 14408 over 10 years Aaron Marcuse-Kubitza **: updated to use the local machine's new host...
.rsync_filter.frenzy.upload 24 Bytes 14408 over 10 years Aaron Marcuse-Kubitza **: updated to use the local machine's new host...
.rsync_filter.vegbiendev.upload 18 Bytes 10067 over 11 years Aaron Marcuse-Kubitza inputs/: don't upload test*.xml to jupiter on v...
BIEN2.datasources.xlsx 14.8 KB 3607 over 12 years Aaron Marcuse-Kubitza Added inputs/BIEN2.datasources.xlsx (formerly b...
Makefile 540 Bytes 10026 over 11 years Aaron Marcuse-Kubitza inputs/Makefile: download-logs: use bin/sync_up...
datasource_release_status.xlsx 33 Bytes 11942 almost 11 years Aaron Marcuse-Kubitza inputs/datasource_release_status.xlsx: renamed ...
import.stats.xls 1.2 MB 12158 over 10 years Aaron Marcuse-Kubitza inputs/import.stats.xls: updated import times
input.Makefile 19.6 KB 14588 about 10 years Aaron Marcuse-Kubitza bugfix: inputs/input.Makefile: %/install: $(exp...
publishable datasources.xlsx 6.27 KB 14512 about 10 years Aaron Marcuse-Kubitza inputs/publishable datasources.xlsx: udpated
publishable datasources.xlsx.url 88 Bytes 11942 almost 11 years Aaron Marcuse-Kubitza inputs/datasource_release_status.xlsx: renamed ...
run 207 Bytes 12891 over 10 years Aaron Marcuse-Kubitza inputs/run: postprocess(): documented runtime o...
  • svn:ignore: .~*

Latest revisions

# Date Author Comment
14633 08/29/2014 03:55 PM Aaron Marcuse-Kubitza

added inputs/CVS/verify/Review of CVS data in BIEN3.docx
14588 08/26/2014 05:02 PM Aaron Marcuse-Kubitza

bugfix: inputs/input.Makefile: %/install: $(exportHeader) must come before postprocess because postprocess renames columns
14582 08/26/2014 04:07 PM Aaron Marcuse-Kubitza

bugfix: inputs/input.Makefile: $(import_install_): need `set -o pipefail` to enable errexit
14579 08/26/2014 02:52 AM Aaron Marcuse-Kubitza

inputs/.geoscrub/geoscrub_output/run: documented postprocess() rm=1 runtime (6 min)
14556 08/21/2014 07:31 PM Aaron Marcuse-Kubitza

fix: inputs/.geoscrub/geoscrub_output/postprocess.sql: map_geovalidity(): unscrubbable names should actually be geo*in*valid, not geovalid=NULL, according to Brad
14532 08/20/2014 04:26 PM Aaron Marcuse-Kubitza

bugfix: inputs/input.Makefile: sql/install: ";" for commands inside $(if) blocks need to be inside the $(if) block, too, because otherwise there will be dangling ";" without a statement (bash does not support empty statements containing just ";")
14512 08/19/2014 11:47 AM Aaron Marcuse-Kubitza

inputs/publishable datasources.xlsx: udpated
14492 08/18/2014 01:58 PM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: taxon_match: added taxon_scrub_best_match_jerry_lu index to facilitate finding names affected by the match-picking bug (#943)
14490 08/17/2014 07:49 AM Aaron Marcuse-Kubitza

fix: inputs/HVAA/Specimen/postprocess.sql, map.csv: monthCollected/dayCollected: fix indefinite dates (which aren't supported by Postgres), as decided by Bob (https://docs.google.com/spreadsheets/d/1PI8n0CRttN7ttsXs5qfh5OFFzSoAfJj0gSbylgX6vj4/edit#gid=0)
14468 08/11/2014 07:48 AM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: taxon_match: added taxon_scrub_by_name index

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