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Name Size Revision Age Author Comment
  _archive 258 about 13 years Aaron Marcuse-Kubitza Moved pre-BIEN 3 files into _archive folder
  bin 1484 almost 13 years Aaron Marcuse-Kubitza bin/map: Deal with fields that may be in the da...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 1485 almost 13 years Aaron Marcuse-Kubitza Added inputs/REMIB
  lib 1483 almost 13 years Aaron Marcuse-Kubitza util.py: Added coalesce()
  mappings 1471 almost 13 years Aaron Marcuse-Kubitza units.py: Restructured to use a Quantity object...
  schemas 1466 almost 13 years Aaron Marcuse-Kubitza vegbien.sql: growthform (and taxonclass) enum: ...
  to_do 811 almost 13 years Aaron Marcuse-Kubitza Added to_do/milestones.doc
Makefile 6.51 KB 1458 almost 13 years Aaron Marcuse-Kubitza root Makefile: Added test-all for most complete...
README.TXT 1.76 KB 1459 almost 13 years Aaron Marcuse-Kubitza README.TXT: Testing: Added instructions for tes...
map 867 Bytes 1299 almost 13 years Aaron Marcuse-Kubitza map: On nimoy, use bien2_staging unless otherwi...

Latest revisions

# Date Author Comment
1485 03/19/2012 06:51 PM Aaron Marcuse-Kubitza

Added inputs/REMIB

1484 03/19/2012 06:09 PM Aaron Marcuse-Kubitza

bin/map: Deal with fields that may be in the dataset under more than one prefix by getting all fields and coalesce()ing them (e.g. SpeciesLink has dwcore* and darwin1* columns for the same DwC field)

1483 03/19/2012 06:06 PM Aaron Marcuse-Kubitza

util.py: Added coalesce()

1482 03/19/2012 05:40 PM Aaron Marcuse-Kubitza

xpath_func.py: process(): Fixed bug where XPath elem's other_branches were not also processed

1481 03/19/2012 05:28 PM Aaron Marcuse-Kubitza

row: Don't prepend header row because this feature prevents the program from being used on a pipeline. Sheets may be constructed in a pipeline if multiple segments need to be joined, e.g. with cat_csv.

1480 03/19/2012 05:09 PM Aaron Marcuse-Kubitza

Added row to get a row of a spreadsheet, preceded by the header row

1479 03/19/2012 05:09 PM Aaron Marcuse-Kubitza

bin programs: Fixed bug in Usage message where program name was not printed because unset variable $self was used instead of $0

1478 03/19/2012 05:08 PM Aaron Marcuse-Kubitza

xml_func.py: _nullIf: types_by_name: Use strings.ustr instead of str to support Unicode values

1477 03/19/2012 04:40 PM Aaron Marcuse-Kubitza

xml_func.py: _nullIf: If value not convertible, return it, because can't equal null. Refactored to store types by name in a dict instead of using if statements.

1476 03/19/2012 04:31 PM Aaron Marcuse-Kubitza

units.py: convert(): raise MissingUnitsException if quantity doesn't have units. MissingUnitsException: Take Quantity input instead of str.

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