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Name Size Revision Age Author Comment
  logs 10168 over 11 years Aaron Marcuse-Kubitza inputs/*/*/logs: updated svn:ignore
.map.csv.last_cleanup 0 Bytes 5756 about 12 years Aaron Marcuse-Kubitza Added inputs/bien_web/
VegBIEN.csv 42 Bytes 10559 over 11 years Aaron Marcuse-Kubitza inputs/bien_web/: switched to new-style import,...
header.csv 659 Bytes 10258 over 11 years Aaron Marcuse-Kubitza inputs/bien_web/bien_web.schema.sql: regenerate...
map.csv 1.55 KB 12963 almost 11 years Aaron Marcuse-Kubitza fix: inputs/*/*/map.csv: remapped occurrenceID-...
new_terms.csv 337 Bytes 12963 almost 11 years Aaron Marcuse-Kubitza fix: inputs/*/*/map.csv: remapped occurrenceID-...
run 63 Bytes 10559 over 11 years Aaron Marcuse-Kubitza inputs/bien_web/: switched to new-style import,...
test.xml.ref 14.8 KB 12963 almost 11 years Aaron Marcuse-Kubitza fix: inputs/*/*/map.csv: remapped occurrenceID-...
unmapped_terms.csv 401 Bytes 9445 over 11 years Aaron Marcuse-Kubitza inputs/bien_web/observation/VegBIEN.csv, unmapp...
  • svn:ignore: *

Latest revisions

# Date Author Comment
12963 03/28/2014 02:39 AM Aaron Marcuse-Kubitza

fix: inputs/*/*/map.csv: remapped occurrenceID-mapped fields to dataProviderRecordID when these were not globally unique DwC occurrenceIDs (http://rs.tdwg.org/dwc/terms/#occurrenceID)

12886 03/24/2014 05:35 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: specimenreplicate.institution_id: renamed to duplicate_institutions_sourcelist_id, as decided in the conference calls (wiki.vegpath.org/2014-03-13_conference_call#schema-changes-2)

12879 03/24/2014 01:49 AM Aaron Marcuse-Kubitza

mappings/VegCore.htm: regenerated from wiki: rename specimenHolderInstitutions to specimen_duplicate_institutions, as decided in the 2014-03-13 conference call (wiki.vegpath.org/2014-03-13_conference_call#schema-changes-2). note that most schema changes (such as this one) involve mappings changes, which are handled automatically by `inputs/run postprocess; yes|make inputs/{NVS,SALVIAS,TEAM}/test`.

11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).

11396 10/21/2013 07:14 PM Aaron Marcuse-Kubitza

fix: bin/map: put template: comment out the "Put template:" label so that the output is valid XML, and displays properly in a browser rather than showing a syntax error

11107 09/29/2013 08:58 PM Aaron Marcuse-Kubitza

bugfix: mappings/VegCore-VegBIEN.csv: nest all taxonoccurrences inside a stratum event, so that the parent locationevent is always fully populated before child locationevents point to it. (previously, a stub parent event was created when the child event was imported first, which blocked the fully-populated parent event from being inserted later on.) this uses auto-folding (for VegBank/CVS) and auto-forwarding (for other datasources) to prune empty stratum events for taxonoccurrences that don't have strata. (see wiki.vegpath.org/Auto-folding, wiki.vegpath.org/Auto-forwarding for more info about these normalization techniques.) note that the inserted row counts stay exactly the same for all datasources except VegBank (which was being fixed), indicating that this signficant change to the mappings did not change the semantics of the import of taxonoccurrences.

10866 09/04/2013 11:06 PM Aaron Marcuse-Kubitza

inputs/*/*/test.xml.ref: updated source.shortname for new datasource name, which now starts out with .new suffix

10559 08/01/2013 01:11 PM Aaron Marcuse-Kubitza

inputs/bien_web/: switched to new-style import, using the steps at wiki.vegpath.org/Adding_new-style_import_to_a_datasource

10281 07/14/2013 04:43 AM Aaron Marcuse-Kubitza

inputs/bien_web/observation/VegBIEN.csv: regenerated now that *_index dummy columns have been removed

10258 07/11/2013 12:26 PM Aaron Marcuse-Kubitza

inputs/bien_web/bien_web.schema.sql: regenerated using bin/my2pg, to remove the *_index dummy columns so they don't create lots of OMIT#... staging table columns

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