1 |
11823
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aaronmk
|
#!/bin/bash -e
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2 |
1541
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aaronmk
|
# Imports all inputs at once
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3 |
14903
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aaronmk
|
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4 |
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. "$(dirname "${BASH_SOURCE[0]}")"/../lib/runscripts/util.run "$@"
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5 |
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6 |
13978
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aaronmk
|
hidden_srcs()
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7 |
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{
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8 |
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local hidden_srcs=1 inputs=() # with_all adds the hidden srcs to @inputs
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9 |
14099
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aaronmk
|
. "$selfDir/with_all" import "$@"
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10 |
13978
|
aaronmk
|
}
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11 |
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12 |
14070
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aaronmk
|
delete_logs()
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13 |
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{
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14 |
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if test "$delete_logs"; then
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15 |
14072
|
aaronmk
|
(set -x; find . -name "${n:+n=$n.}$version.log.sql" -delete)
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16 |
14070
|
aaronmk
|
fi
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17 |
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}
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18 |
13985
|
aaronmk
|
|
19 |
11416
|
aaronmk
|
main()
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20 |
1952
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aaronmk
|
{
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21 |
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local self="${BASH_SOURCE[0]}"
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22 |
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local selfDir="$(dirname -- "$self")"
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23 |
11430
|
aaronmk
|
pushd "$selfDir/.."
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24 |
1952
|
aaronmk
|
|
25 |
13982
|
aaronmk
|
if ! test "$SHLVL" -ge 2; then # was run without subshell
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26 |
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# needs subshell so errexits don't close the terminal window
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27 |
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echo 'usage: must be run in a subshell, obtained by running `$0`' >&2
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28 |
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return 0 # not nonzero because this will close the terminal window
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29 |
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fi
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30 |
1953
|
aaronmk
|
if test "${BASH_LINENO[1]}" = 0; then # was run without initial "."
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31 |
13981
|
aaronmk
|
echo "usage: (*in subshell*) [version=...] [inputs=(inputs/src/ ...)]; \
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32 |
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. $self [vars...] (note initial \".\")"|fold -s >&2
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33 |
13983
|
aaronmk
|
return 0 # not nonzero because this will close the subshell
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34 |
1952
|
aaronmk
|
fi
|
35 |
14903
|
aaronmk
|
: ${version=$(output_data=1 make -s version)}
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36 |
10579
|
aaronmk
|
local by_col=${by_col-1} full_import=1
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37 |
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export version by_col full_import
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38 |
1952
|
aaronmk
|
|
39 |
14070
|
aaronmk
|
if test ! "${log-1}"; then local delete_logs=1; fi #log==''
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40 |
14073
|
aaronmk
|
trap delete_logs SIGINT SIGTERM #not EXIT b/c doesn't run until *shell* exit
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41 |
13985
|
aaronmk
|
|
42 |
13980
|
aaronmk
|
local log=1 # always use log files for background processes
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43 |
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44 |
10847
|
aaronmk
|
# remove any leftover TNRS lockfile. usually, the PID in it would not exist,
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45 |
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# but sometimes it now refers to an active process which blocks tnrs.make.
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46 |
11419
|
aaronmk
|
"rm" -f inputs/.TNRS/tnrs/tnrs.make.lock
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47 |
10847
|
aaronmk
|
|
48 |
11421
|
aaronmk
|
make schemas/$version/reinstall
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49 |
6946
|
aaronmk
|
|
50 |
13979
|
aaronmk
|
local hidden_srcs=1; . "$selfDir/with_all" Source/import "$@"
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51 |
6897
|
aaronmk
|
# note that this isn't affected by $import_source
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52 |
6593
|
aaronmk
|
wait # wait for asynchronous commands
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53 |
11374
|
aaronmk
|
unset hidden_srcs
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54 |
6593
|
aaronmk
|
|
55 |
7095
|
aaronmk
|
local import_source= # Source tables have already been imported
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56 |
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export import_source # must come after local
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57 |
6897
|
aaronmk
|
|
58 |
13978
|
aaronmk
|
hidden_srcs "$@" # separate function to avoid overwriting @inputs
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59 |
6594
|
aaronmk
|
wait # wait for asynchronous commands
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60 |
5503
|
aaronmk
|
|
61 |
11286
|
aaronmk
|
. "$selfDir/with_all" import_scrub "$@" # uses $by_col
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62 |
6210
|
aaronmk
|
|
63 |
7418
|
aaronmk
|
local jobs="$(jobs -p)"
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64 |
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echo "import_scrub PIDs: $jobs" >&2
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65 |
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66 |
10586
|
aaronmk
|
bin/after_import $jobs &
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67 |
7276
|
aaronmk
|
echo "after_import PID: $!" >&2
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68 |
7228
|
aaronmk
|
|
69 |
11430
|
aaronmk
|
popd
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70 |
14073
|
aaronmk
|
delete_logs # manually run b/c `trap EXIT` doesn't run until *shell* exit
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71 |
1952
|
aaronmk
|
}
|
72 |
14903
|
aaronmk
|
|
73 |
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on_exit
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