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Revision 1529

mappings/Makefile: Generate DwC-VegBIEN.specimens.csv from new intermediate DwC.ci-VegBIEN.specimens.csv using $(removeEmpty) so that "No join mapping" errors will be reported when maps are joined to it. Deprecate DwC-VegBIEN.specimens.no_empty.csv because it's now identical to DwC-VegBIEN.specimens.csv.

View differences:

inputs/U/maps/VegBIEN.specimens.csv
26 26
Majorarea,,
27 27
NS,,
28 28
Newgazett,,
29
Phenology,,,28
29
Phenology,,** No join mapping for ReproductiveCondition ** 
30 30
Prefix,,Not used
31 31
Suffix,,Not used
32
cf,,,124
32
cf,,** No join mapping for IdentificationQualifier ** 
inputs/ARIZ/maps/VegBIEN.specimens.csv
41 41
GlobalUniqueIdentifier,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
42 42
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
43 43
FieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
44
AgeClass,,,27
45
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
44
AgeClass,,** No join mapping for lifeStage ** 
46 45
CatalogNumber,,Map to nothing so it doesn't overwrite CatalogNumberNumeric
47
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
48
GenBankNum,,,39
49
GeorefMethod,,,96
50
HigherGeography,,,58
46
GenBankNum,,"** No join mapping for associatedSequences/_label[label=""GenBank""]/value ** "
47
GeorefMethod,,** No join mapping for georeferenceProtocol ** 
51 48
HorizontalDatum,,Not used
52
IdentificationModifier,,,124
53
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
54
InstitutionCode,,,
55
Island,,,62
56
IslandGroup,,,61
57
JulianDay,,Brad: OMIT,50
58
LatLongComments,,,99
59
OriginalCoordinateSystem,,,84
60
OtherCatalogNumbers,,Brad: OMIT,161
61
Preparations,,Brad: OMIT,32
62
RelatedCatalogedItems,,"Used only when OtherCatalogNumbers is NULL, so _alt not needed; Brad: OMIT",161
63
TimeCollected,,Brad: OMIT,45
49
IdentificationModifier,,** No join mapping for identificationQualifier ** 
50
LatLongComments,,** No join mapping for georeferenceRemarks ** 
51
OriginalCoordinateSystem,,** No join mapping for verbatimSRS ** 
52
OtherCatalogNumbers,,** No join mapping for RelatedCatalogItem ** 
53
RelatedCatalogedItems,,"** No join mapping for RelatedCatalogItem ** Used only when OtherCatalogNumbers is NULL, so _alt not needed"
54
TimeCollected,,** No join mapping for TimeOfDay ** 
64 55
Tissues,,Not used
65
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
66
VerbatimDepth,,,73
67
VerbatimElevation,,,70
inputs/NY/maps/VegBIEN.specimens.csv
41 41
UniqueNYInternalRecordNumber,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
42 42
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
43 43
FieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
44
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
45
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
46
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
47
InstitutionCode,,,
48
JulianDay,,Brad: OMIT,50
49
PreparationType,,Brad: OMIT,32
50
PreviousCatalogNumber,,?; Brad: OMIT,35
51
RelatedCatalogItem,,Brad: OMIT,161
52
RelationshipType,,Brad: OMIT,162
53
TimeOfDay,,Brad: OMIT,45
54
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
55 44
key,,
inputs/GBIF/maps/VegBIEN.specimens.csv
20 20
Collector,/*_id/taxonoccurrence/verbatimcollectorname,,23
21 21
CollectionCD,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
22 22
CatalogNO,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/catalognumber_dwc","Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
23
GBIFFamilyOriginal,,DwC doesn't fully support taxonomic redeterminations,137
24
GBIFGenusOriginal,,DwC doesn't fully support taxonomic redeterminations,137
25
InstitutionCD,,,
26
LastDateModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
27
ScientificNameOriginal,,DwC doesn't fully support taxonomic redeterminations,137
23
GBIFFamilyOriginal,,** No join mapping for originalNameUsage/_alt/2/_name/first ** DwC doesn't fully support taxonomic redeterminations
24
GBIFGenusOriginal,,** No join mapping for originalNameUsage/_alt/2/_name/middle ** DwC doesn't fully support taxonomic redeterminations
25
InstitutionCD,,** No join mapping for InstitutionCode ** 
26
LastDateModified,,** No join mapping for DateLastModified ** 
27
ScientificNameOriginal,,** No join mapping for originalNameUsage/_alt/1 ** DwC doesn't fully support taxonomic redeterminations
inputs/UNCC/maps/VegBIEN.specimens.csv
27 27
inorout,"/description/_merge/1/_merge/7/_label[label=""in or out""]/value",,
28 28
accession,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
29 29
collectno,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
30
cultivated,,Ignore other values,30
30
cultivated,,"** No join mapping for establishmentMeans/_map:[Y=cultivated,N=wild]/value ** Ignore other values"
31 31
filler,,"Where used, same as family"
32
flower,,"Main values are A, I, and M. What do they mean?",28
33
fruit,,"Main values are A, I, and M. What do they mean?",28
34
infrarank,,,151
35
leaves,,"Main values are A, I, and M. What do they mean?",28
36
root,,"Main values are A, I, and M. What do they mean?",28
37
sheetno,,?,36
38
usdaRank,,,151
32
flower,,"** No join mapping for reproductiveCondition/_map:[]/value ** Main values are A, I, and M. What do they mean?"
33
fruit,,"** No join mapping for reproductiveCondition/_map:[]/value ** Main values are A, I, and M. What do they mean?"
34
infrarank,,** No join mapping for taxonRank/_alt/2 ** 
35
leaves,,"** No join mapping for reproductiveCondition/_map:[]/value ** Main values are A, I, and M. What do they mean?"
36
root,,"** No join mapping for reproductiveCondition/_map:[]/value ** Main values are A, I, and M. What do they mean?"
37
sheetno,,** No join mapping for associatedMedia ** ?
38
usdaRank,,** No join mapping for taxonRank/_alt/1 ** 
inputs/NCU-NCSC/maps/VegBIEN.specimens.csv
12 12
Accession Number,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
13 13
Alt E/W,,
14 14
Alt N/S,,
15
Cultivated?,,,30
16
Elevation,,,70
15
Cultivated?,,"** No join mapping for establishmentMeans/_map:[_closed=1,Yes=cultivated,No=wild]/value ** "
16
Elevation,,** No join mapping for VerbatimElevation ** 
17 17
FIPS,,FIPS county code
18
Format,,Brad: OMIT,32
18
Format,,** No join mapping for PreparationType ** 
19 19
Typology,,
inputs/SpeciesLink/maps/VegBIEN.specimens.csv
48 48
GlobalUniqueIdentifier,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
49 49
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
50 50
FieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
51
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
52
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
53
DayOfYear,,Brad: OMIT,50
54
GeodeticDatum,,,87
55
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
56
InstitutionCode,,,
57
JulianDay,,Brad: OMIT,50
58
PreparationType,,Brad: OMIT,32
59
PreviousCatalogNumber,,?; Brad: OMIT,35
60
RelatedCatalogItem,,Brad: OMIT,161
61
RelationshipType,,Brad: OMIT,162
62
TimeOfDay,,Brad: OMIT,45
63
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
51
DayOfYear,,** No join mapping for JulianDay ** 
inputs/MO/maps/VegBIEN.specimens.csv
24 24
notes,/description/_merge/1,,
25 25
CatalogNumber,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/catalognumber_dwc","Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
26 26
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
27
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
28
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
29
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
30
InstitutionCode,,,
31
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
32 27
convertednotes,,
inputs/REMIB/maps/VegBIEN.specimens.csv
19 19
lat_sec,,
20 20
long_min,,
21 21
long_sec,,
22
preparation,,Brad: OMIT,32
mappings/DwC.ci-VegBIEN.specimens.csv
1
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list:[institutionID=$/_ignore/inLabel]/",VegBIEN:/specimenreplicate,Comments,Order
2
CoordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
3
coordinateUncertaintyInMeters,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,88
4
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
5
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,,89
6
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
7
FootprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
8
boundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
9
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,,91
10
County,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
11
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
12
State,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
13
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
14
state,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
15
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
16
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
17
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
18
Continent,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",Brad: OMIT,59
19
ContinentOcean,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",Brad: OMIT,59
20
continent,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",Brad: OMIT,59
21
continentOcean,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",Brad: OMIT,59
22
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
23
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
24
VerbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
25
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
26
Habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
27
habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
28
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_units:[default=m,to=m,to=]/value/_rangeStart/value,elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value}",,71
29
MinimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_units:[default=m,to=m,to=]/value/_rangeStart/value,elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value}",,71
30
minimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_units:[default=m,to=m,to=]/value/_rangeStart/value,elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value}",,71
31
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{./{elevation/_alt/2/_avg/min,elevationrange/_range/from}/_units:[default=m,to=m,to=]/value/_rangeStart/value,elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value}",,71
32
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value,elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1}",,72
33
MaximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value,elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1}",,72
34
maximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value,elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1}",,72
35
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value,elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1}",,72
36
DecimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
37
decimalLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/1/_nullIf:[null=0,type=float]/value",,85
38
Latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
39
VerbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
40
latitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
41
verbatimLatitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/latitude,centerlatitude}/_alt/2/_nullIf:[null=0,type=float]/value",,81
42
DecimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
43
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/1/_nullIf:[null=0,type=float]/value",,86
44
Longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
45
VerbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
46
longitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
47
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
48
MaximumDepth,"/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,75
49
MaximumDepthInMeters,"/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,75
50
maximumDepth,"/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,75
51
maximumDepthInMeters,"/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,75
52
MinimumDepth,"/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,74
53
MinimumDepthInMeters,"/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,74
54
minimumDepth,"/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,74
55
minimumDepthInMeters,"/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,74
56
EventDate/_alt,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt",Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44
57
eventDate/_alt,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt",Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping,44
58
DayCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44
59
dayCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44
60
MonthCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,44
61
monthCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,44
62
YearCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,44
63
yearCollected,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,44
64
EventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/2",,44
65
eventDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/2",,44
66
CollectedDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/3",,44
67
collectedDate,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/3",,44
68
DateIdentified/_alt,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping,120
69
dateIdentified/_alt,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping,120
70
DayIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,120
71
dayIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,120
72
MonthIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,120
73
monthIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,120
74
YearIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,120
75
yearIdentified,"/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,120
76
DateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,,120
77
dateIdentified,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,,120
78
IdentifiedDate,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,,120
79
identifiedDate,/*_id/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,,120
80
IdentifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
81
identifiedBy,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
82
ScientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
83
scientificName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
84
ScientificNameAuthor,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
85
ScientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
86
scientificNameAuthor,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
87
scientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
88
InfraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
89
Subspecies,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
90
infraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
91
subspecies,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
92
Species,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
93
SpecificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
94
species,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
95
specificEpithet,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
96
Genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
97
genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
98
Family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
99
family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
100
Order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
101
order,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,145
102
Class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
103
class,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,144
104
Phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
105
phylum,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,143
106
Kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
107
kingdom,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,142
108
Collector,/*_id/taxonoccurrence/verbatimcollectorname,,23
109
RecordedBy,/*_id/taxonoccurrence/verbatimcollectorname,,23
110
collector,/*_id/taxonoccurrence/verbatimcollectorname,,23
111
recordedBy,/*_id/taxonoccurrence/verbatimcollectorname,,23
112
CollectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
113
collectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
114
Sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
115
sex,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
116
FieldNotes,/description/_merge/1,,
117
Notes,/description/_merge/1,,
118
fieldNotes,/description/_merge/1,,
119
notes,/description/_merge/1,,
120
Remarks,/description/_merge/2,,158
121
TaxonRemarks,/description/_merge/2,,158
122
remarks,/description/_merge/2,,158
123
taxonRemarks,/description/_merge/2,,158
124
CatalogNumber,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/catalognumber_dwc","Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
125
catalogNumber,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/catalognumber_dwc","Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
126
GlobalUniqueIdentifier,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
127
OccurrenceID,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
128
globalUniqueIdentifier,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
129
occurrenceID,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
130
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
131
RecordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
132
collectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
133
recordNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22
134
CollectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
135
collectionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/2,,9
136
FieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
137
fieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
138
InstitutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
139
institutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
140
AcceptedNameUsage,,,135
141
AcceptedNameUsageID,,,128
142
AssociatedMedia,,,36
143
AssociatedOccurrences,,,38
144
AssociatedReferences,,,37
145
AssociatedSequences,,,39
146
AssociatedTaxa,,,40
147
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
148
Bed,,,117
149
Behavior,,,29
150
CountryCode,,,64
151
DataGeneralizations,,,17
152
DatasetID,,,10
153
DatasetName,,,13
154
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
155
Day,,Brad: OMIT,50
156
Dcterms:accessRights,,,5
157
Dcterms:bibliographicCitation,,,6
158
Dcterms:language,,,2
159
Dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
160
Dcterms:references,,,7
161
Dcterms:rights,,,3
162
Dcterms:rightsHolder,,,4
163
Dcterms:type,,,0
164
Disposition,,,33
165
DynamicProperties,,,18
166
EarliestAgeOrLowestStage,,,109
167
EarliestEonOrLowestEonothem,,,101
168
EarliestEpochOrLowestSeries,,,107
169
EarliestEraOrLowestErathem,,,103
170
EarliestPeriodOrLowestSystem,,,105
171
EndDayOfYear,,,47
172
EstablishmentMeans,,,30
173
EventID,,,41
174
EventRemarks,,,55
175
EventTime,,Brad: OMIT,45
176
FootprintSRS,,,92
177
FootprintSpatialFit,,,93
178
Formation,,,115
179
GeodeticDatum,,,87
180
GeologicalContextID,,,100
181
GeoreferenceProtocol,,,96
182
GeoreferenceRemarks,,,99
183
GeoreferenceSources,,,97
184
GeoreferenceVerificationStatus,,,98
185
GeoreferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
186
GeoreferencedDate,,,95
187
Group,,,114
188
HigherClassification,,,141
189
HigherGeography,,,58
190
HigherGeographyID,,,57
191
HighestBiostratigraphicZone,,,112
192
IdentificationID,,,118
193
IdentificationQualifier,,,124
194
IdentificationReferences,,,121
195
IdentificationRemarks,,,123
196
IdentificationVerificationStatus,,,122
197
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
198
IndividualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
199
InformationWithheld,,,16
200
InstitutionCode,,,
201
Island,,,62
202
IslandGroup,,,61
203
JulianDay,,Brad: OMIT,50
204
LatestAgeOrHighestStage,,,110
205
LatestEonOrHighestEonothem,,,102
206
LatestEpochOrHighestSeries,,,108
207
LatestEraOrHighestErathem,,,104
208
LatestPeriodOrHighestSystem,,,106
209
LifeStage,,,27
210
LithostratigraphicTerms,,,113
211
LocationAccordingTo,,,78
212
LocationID,,,56
213
LocationRemarks,,,79
214
LowestBiostratigraphicZone,,,111
215
MaximumDistanceAboveSurfaceInMeters,,,77
216
MeasurementAccuracy,,,169
217
MeasurementDeterminedBy,,,172
218
MeasurementDeterminedDate,,,171
219
MeasurementID,,,166
220
MeasurementMethod,,,173
221
MeasurementRemarks,,,174
222
MeasurementType,,,167
223
MeasurementUnit,,,170
224
MeasurementValue,,,168
225
Member,,,116
226
MinimumDistanceAboveSurfaceInMeters,,,76
227
Month,,,49
228
Municipality,,,67
229
NameAccordingTo,,,138
230
NameAccordingToID,,,131
231
NamePublishedIn,,,139
232
NamePublishedInID,,,132
233
NamePublishedInYear,,,140
234
NomenclaturalCode,,,155
235
NomenclaturalStatus,,,157
236
OccurrenceRemarks,,,21
237
OccurrenceStatus,,,31
238
OriginalNameUsage,,,137
239
OriginalNameUsageID,,,130
240
OtherCatalogNumbers,,,34
241
OwnerInstitutionCode,,,14
242
ParentNameUsage,,,136
243
ParentNameUsageID,,,129
244
PointRadiusSpatialFit,,,90
245
Preparation,,Brad: OMIT,32
246
PreparationType,,Brad: OMIT,32
247
Preparations,,Brad: OMIT,32
248
PreviousCatalogNumber,,?; Brad: OMIT,35
249
PreviousIdentifications,,Brad: OMIT,35
250
RelatedCatalogItem,,Brad: OMIT,161
251
RelatedResourceID,,Brad: OMIT,161
252
RelationshipAccordingTo,,,163
253
RelationshipEstablishedDate,,,164
254
RelationshipOfResource,,Brad: OMIT,162
255
RelationshipRemarks,,,165
256
RelationshipType,,Brad: OMIT,162
257
ReproductiveCondition,,,28
258
ResourceID,,,160
259
ResourceRelationshipID,,,159
260
SamplingEffort,,,43
261
SamplingProtocol,,,42
262
ScientificNameID,,,127
263
StartDayOfYear,,,46
264
Subgenus,,,148
265
TaxonConceptID,,,133
266
TaxonID,,,126
267
TaxonRank,,,151
268
TaxonomicStatus,,,156
269
TimeOfDay,,Brad: OMIT,45
270
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
271
VerbatimCoordinateSystem,,,83
272
VerbatimCoordinates,,,80
273
VerbatimDepth,,,73
274
VerbatimElevation,,,70
275
VerbatimEventDate,,,51
276
VerbatimSRS,,,84
277
VerbatimTaxonRank,,,152
278
VernacularName,,,154
279
WaterBody,,,60
280
Year,,,48
281
acceptedNameUsage,,,135
282
acceptedNameUsageID,,,128
283
associatedMedia,,,36
284
associatedOccurrences,,,38
285
associatedReferences,,,37
286
associatedSequences,,,39
287
associatedTaxa,,,40
288
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
289
bed,,,117
290
behavior,,,29
291
countryCode,,,64
292
dataGeneralizations,,,17
293
datasetID,,,10
294
datasetName,,,13
295
dateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
296
day,,Brad: OMIT,50
297
dcterms:accessRights,,,5
298
dcterms:bibliographicCitation,,,6
299
dcterms:language,,,2
300
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
301
dcterms:references,,,7
302
dcterms:rights,,,3
303
dcterms:rightsHolder,,,4
304
dcterms:type,,,0
305
disposition,,,33
306
dynamicProperties,,,18
307
earliestAgeOrLowestStage,,,109
308
earliestEonOrLowestEonothem,,,101
309
earliestEpochOrLowestSeries,,,107
310
earliestEraOrLowestErathem,,,103
311
earliestPeriodOrLowestSystem,,,105
312
endDayOfYear,,,47
313
establishmentMeans,,,30
314
eventID,,,41
315
eventRemarks,,,55
316
eventTime,,Brad: OMIT,45
317
footprintSRS,,,92
318
footprintSpatialFit,,,93
319
formation,,,115
320
geodeticDatum,,,87
321
geologicalContextID,,,100
322
georeferenceProtocol,,,96
323
georeferenceRemarks,,,99
324
georeferenceSources,,,97
325
georeferenceVerificationStatus,,,98
326
georeferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
327
georeferencedDate,,,95
328
group,,,114
329
higherClassification,,,141
330
higherGeography,,,58
331
higherGeographyID,,,57
332
highestBiostratigraphicZone,,,112
333
identificationID,,,118
334
identificationQualifier,,,124
335
identificationReferences,,,121
336
identificationRemarks,,,123
337
identificationVerificationStatus,,,122
338
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
339
individualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
340
informationWithheld,,,16
341
institutionCode,,,
342
island,,,62
343
islandGroup,,,61
344
julianDay,,Brad: OMIT,50
345
latestAgeOrHighestStage,,,110
346
latestEonOrHighestEonothem,,,102
347
latestEpochOrHighestSeries,,,108
348
latestEraOrHighestErathem,,,104
349
latestPeriodOrHighestSystem,,,106
350
lifeStage,,,27
351
lithostratigraphicTerms,,,113
352
locationAccordingTo,,,78
353
locationID,,,56
354
locationRemarks,,,79
355
lowestBiostratigraphicZone,,,111
356
maximumDistanceAboveSurfaceInMeters,,,77
357
measurementAccuracy,,,169
358
measurementDeterminedBy,,,172
359
measurementDeterminedDate,,,171
360
measurementID,,,166
361
measurementMethod,,,173
362
measurementRemarks,,,174
363
measurementType,,,167
364
measurementUnit,,,170
365
measurementValue,,,168
366
member,,,116
367
minimumDistanceAboveSurfaceInMeters,,,76
368
month,,,49
369
municipality,,,67
370
nameAccordingTo,,,138
371
nameAccordingToID,,,131
372
namePublishedIn,,,139
373
namePublishedInID,,,132
374
namePublishedInYear,,,140
375
nomenclaturalCode,,,155
376
nomenclaturalStatus,,,157
377
occurrenceRemarks,,,21
378
occurrenceStatus,,,31
379
originalNameUsage,,,137
380
originalNameUsageID,,,130
381
otherCatalogNumbers,,,34
382
ownerInstitutionCode,,,14
383
parentNameUsage,,,136
384
parentNameUsageID,,,129
385
pointRadiusSpatialFit,,,90
386
preparation,,Brad: OMIT,32
387
preparationType,,Brad: OMIT,32
388
preparations,,Brad: OMIT,32
389
previousCatalogNumber,,?; Brad: OMIT,35
390
previousIdentifications,,Brad: OMIT,35
391
relatedCatalogItem,,Brad: OMIT,161
392
relatedResourceID,,Brad: OMIT,161
393
relationshipAccordingTo,,,163
394
relationshipEstablishedDate,,,164
395
relationshipOfResource,,Brad: OMIT,162
396
relationshipRemarks,,,165
397
relationshipType,,Brad: OMIT,162
398
reproductiveCondition,,,28
399
resourceID,,,160
400
resourceRelationshipID,,,159
401
samplingEffort,,,43
402
samplingProtocol,,,42
403
scientificNameID,,,127
404
startDayOfYear,,,46
405
subgenus,,,148
406
taxonConceptID,,,133
407
taxonID,,,126
408
taxonRank,,,151
409
taxonomicStatus,,,156
410
timeOfDay,,Brad: OMIT,45
411
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
412
verbatimCoordinateSystem,,,83
413
verbatimCoordinates,,,80
414
verbatimDepth,,,73
415
verbatimElevation,,,70
416
verbatimEventDate,,,51
417
verbatimSRS,,,84
418
verbatimTaxonRank,,,152
419
vernacularName,,,154
420
waterBody,,,60
421
year,,,48
mappings/DwC-VegBIEN.specimens.csv
137 137
fieldNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
138 138
InstitutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
139 139
institutionID,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,,8
140
AcceptedNameUsage,,,135
141
AcceptedNameUsageID,,,128
142
AssociatedMedia,,,36
143
AssociatedOccurrences,,,38
144
AssociatedReferences,,,37
145
AssociatedSequences,,,39
146
AssociatedTaxa,,,40
147
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
148
Bed,,,117
149
Behavior,,,29
150
CountryCode,,,64
151
DataGeneralizations,,,17
152
DatasetID,,,10
153
DatasetName,,,13
154
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
155
Day,,Brad: OMIT,50
156
Dcterms:accessRights,,,5
157
Dcterms:bibliographicCitation,,,6
158
Dcterms:language,,,2
159
Dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
160
Dcterms:references,,,7
161
Dcterms:rights,,,3
162
Dcterms:rightsHolder,,,4
163
Dcterms:type,,,0
164
Disposition,,,33
165
DynamicProperties,,,18
166
EarliestAgeOrLowestStage,,,109
167
EarliestEonOrLowestEonothem,,,101
168
EarliestEpochOrLowestSeries,,,107
169
EarliestEraOrLowestErathem,,,103
170
EarliestPeriodOrLowestSystem,,,105
171
EndDayOfYear,,,47
172
EstablishmentMeans,,,30
173
EventID,,,41
174
EventRemarks,,,55
175
EventTime,,Brad: OMIT,45
176
FootprintSRS,,,92
177
FootprintSpatialFit,,,93
178
Formation,,,115
179
GeodeticDatum,,,87
180
GeologicalContextID,,,100
181
GeoreferenceProtocol,,,96
182
GeoreferenceRemarks,,,99
183
GeoreferenceSources,,,97
184
GeoreferenceVerificationStatus,,,98
185
GeoreferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
186
GeoreferencedDate,,,95
187
Group,,,114
188
HigherClassification,,,141
189
HigherGeography,,,58
190
HigherGeographyID,,,57
191
HighestBiostratigraphicZone,,,112
192
IdentificationID,,,118
193
IdentificationQualifier,,,124
194
IdentificationReferences,,,121
195
IdentificationRemarks,,,123
196
IdentificationVerificationStatus,,,122
197
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
198
IndividualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
199
InformationWithheld,,,16
200
InstitutionCode,,,
201
Island,,,62
202
IslandGroup,,,61
203
JulianDay,,Brad: OMIT,50
204
LatestAgeOrHighestStage,,,110
205
LatestEonOrHighestEonothem,,,102
206
LatestEpochOrHighestSeries,,,108
207
LatestEraOrHighestErathem,,,104
208
LatestPeriodOrHighestSystem,,,106
209
LifeStage,,,27
210
LithostratigraphicTerms,,,113
211
LocationAccordingTo,,,78
212
LocationID,,,56
213
LocationRemarks,,,79
214
LowestBiostratigraphicZone,,,111
215
MaximumDistanceAboveSurfaceInMeters,,,77
216
MeasurementAccuracy,,,169
217
MeasurementDeterminedBy,,,172
218
MeasurementDeterminedDate,,,171
219
MeasurementID,,,166
220
MeasurementMethod,,,173
221
MeasurementRemarks,,,174
222
MeasurementType,,,167
223
MeasurementUnit,,,170
224
MeasurementValue,,,168
225
Member,,,116
226
MinimumDistanceAboveSurfaceInMeters,,,76
227
Month,,,49
228
Municipality,,,67
229
NameAccordingTo,,,138
230
NameAccordingToID,,,131
231
NamePublishedIn,,,139
232
NamePublishedInID,,,132
233
NamePublishedInYear,,,140
234
NomenclaturalCode,,,155
235
NomenclaturalStatus,,,157
236
OccurrenceRemarks,,,21
237
OccurrenceStatus,,,31
238
OriginalNameUsage,,,137
239
OriginalNameUsageID,,,130
240
OtherCatalogNumbers,,,34
241
OwnerInstitutionCode,,,14
242
ParentNameUsage,,,136
243
ParentNameUsageID,,,129
244
PointRadiusSpatialFit,,,90
245
Preparation,,Brad: OMIT,32
246
PreparationType,,Brad: OMIT,32
247
Preparations,,Brad: OMIT,32
248
PreviousCatalogNumber,,?; Brad: OMIT,35
249
PreviousIdentifications,,Brad: OMIT,35
250
RelatedCatalogItem,,Brad: OMIT,161
251
RelatedResourceID,,Brad: OMIT,161
252
RelationshipAccordingTo,,,163
253
RelationshipEstablishedDate,,,164
254
RelationshipOfResource,,Brad: OMIT,162
255
RelationshipRemarks,,,165
256
RelationshipType,,Brad: OMIT,162
257
ReproductiveCondition,,,28
258
ResourceID,,,160
259
ResourceRelationshipID,,,159
260
SamplingEffort,,,43
261
SamplingProtocol,,,42
262
ScientificNameID,,,127
263
StartDayOfYear,,,46
264
Subgenus,,,148
265
TaxonConceptID,,,133
266
TaxonID,,,126
267
TaxonRank,,,151
268
TaxonomicStatus,,,156
269
TimeOfDay,,Brad: OMIT,45
270
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
271
VerbatimCoordinateSystem,,,83
272
VerbatimCoordinates,,,80
273
VerbatimDepth,,,73
274
VerbatimElevation,,,70
275
VerbatimEventDate,,,51
276
VerbatimSRS,,,84
277
VerbatimTaxonRank,,,152
278
VernacularName,,,154
279
WaterBody,,,60
280
Year,,,48
281
acceptedNameUsage,,,135
282
acceptedNameUsageID,,,128
283
associatedMedia,,,36
284
associatedOccurrences,,,38
285
associatedReferences,,,37
286
associatedSequences,,,39
287
associatedTaxa,,,40
288
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
289
bed,,,117
290
behavior,,,29
291
countryCode,,,64
292
dataGeneralizations,,,17
293
datasetID,,,10
294
datasetName,,,13
295
dateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
296
day,,Brad: OMIT,50
297
dcterms:accessRights,,,5
298
dcterms:bibliographicCitation,,,6
299
dcterms:language,,,2
300
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
301
dcterms:references,,,7
302
dcterms:rights,,,3
303
dcterms:rightsHolder,,,4
304
dcterms:type,,,0
305
disposition,,,33
306
dynamicProperties,,,18
307
earliestAgeOrLowestStage,,,109
308
earliestEonOrLowestEonothem,,,101
309
earliestEpochOrLowestSeries,,,107
310
earliestEraOrLowestErathem,,,103
311
earliestPeriodOrLowestSystem,,,105
312
endDayOfYear,,,47
313
establishmentMeans,,,30
314
eventID,,,41
315
eventRemarks,,,55
316
eventTime,,Brad: OMIT,45
317
footprintSRS,,,92
318
footprintSpatialFit,,,93
319
formation,,,115
320
geodeticDatum,,,87
321
geologicalContextID,,,100
322
georeferenceProtocol,,,96
323
georeferenceRemarks,,,99
324
georeferenceSources,,,97
325
georeferenceVerificationStatus,,,98
326
georeferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
327
georeferencedDate,,,95
328
group,,,114
329
higherClassification,,,141
330
higherGeography,,,58
331
higherGeographyID,,,57
332
highestBiostratigraphicZone,,,112
333
identificationID,,,118
334
identificationQualifier,,,124
335
identificationReferences,,,121
336
identificationRemarks,,,123
337
identificationVerificationStatus,,,122
338
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
339
individualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
340
informationWithheld,,,16
341
institutionCode,,,
342
island,,,62
343
islandGroup,,,61
344
julianDay,,Brad: OMIT,50
345
latestAgeOrHighestStage,,,110
346
latestEonOrHighestEonothem,,,102
347
latestEpochOrHighestSeries,,,108
348
latestEraOrHighestErathem,,,104
349
latestPeriodOrHighestSystem,,,106
350
lifeStage,,,27
351
lithostratigraphicTerms,,,113
352
locationAccordingTo,,,78
353
locationID,,,56
354
locationRemarks,,,79
355
lowestBiostratigraphicZone,,,111
356
maximumDistanceAboveSurfaceInMeters,,,77
357
measurementAccuracy,,,169
358
measurementDeterminedBy,,,172
359
measurementDeterminedDate,,,171
360
measurementID,,,166
361
measurementMethod,,,173
362
measurementRemarks,,,174
363
measurementType,,,167
364
measurementUnit,,,170
365
measurementValue,,,168
366
member,,,116
367
minimumDistanceAboveSurfaceInMeters,,,76
368
month,,,49
369
municipality,,,67
370
nameAccordingTo,,,138
371
nameAccordingToID,,,131
372
namePublishedIn,,,139
373
namePublishedInID,,,132
374
namePublishedInYear,,,140
375
nomenclaturalCode,,,155
376
nomenclaturalStatus,,,157
377
occurrenceRemarks,,,21
378
occurrenceStatus,,,31
379
originalNameUsage,,,137
380
originalNameUsageID,,,130
381
otherCatalogNumbers,,,34
382
ownerInstitutionCode,,,14
383
parentNameUsage,,,136
384
parentNameUsageID,,,129
385
pointRadiusSpatialFit,,,90
386
preparation,,Brad: OMIT,32
387
preparationType,,Brad: OMIT,32
388
preparations,,Brad: OMIT,32
389
previousCatalogNumber,,?; Brad: OMIT,35
390
previousIdentifications,,Brad: OMIT,35
391
relatedCatalogItem,,Brad: OMIT,161
392
relatedResourceID,,Brad: OMIT,161
393
relationshipAccordingTo,,,163
394
relationshipEstablishedDate,,,164
395
relationshipOfResource,,Brad: OMIT,162
396
relationshipRemarks,,,165
397
relationshipType,,Brad: OMIT,162
398
reproductiveCondition,,,28
399
resourceID,,,160
400
resourceRelationshipID,,,159
401
samplingEffort,,,43
402
samplingProtocol,,,42
403
scientificNameID,,,127
404
startDayOfYear,,,46
405
subgenus,,,148
406
taxonConceptID,,,133
407
taxonID,,,126
408
taxonRank,,,151
409
taxonomicStatus,,,156
410
timeOfDay,,Brad: OMIT,45
411
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
412
verbatimCoordinateSystem,,,83
413
verbatimCoordinates,,,80
414
verbatimDepth,,,73
415
verbatimElevation,,,70
416
verbatimEventDate,,,51
417
verbatimSRS,,,84
418
verbatimTaxonRank,,,152
419
vernacularName,,,154
420
waterBody,,,60
421
year,,,48
mappings/Makefile
56 56
	$(join) <$+ >$@
57 57
joinMaps += DwC.cs-VegBIEN.specimens.csv
58 58

  
59
DwC-VegBIEN.specimens.csv: DwC.cs-VegBIEN.specimens.csv
59
DwC.ci-VegBIEN.specimens.csv: DwC.cs-VegBIEN.specimens.csv
60 60
	$(bin)/ci_map $< >$@
61
joinMaps += DwC.ci-VegBIEN.specimens.csv
62

  
63
DwC-VegBIEN.specimens.csv: DwC.ci-VegBIEN.specimens.csv
64
	$(removeEmpty) <$< >$@
61 65
joinMaps += DwC-VegBIEN.specimens.csv
62 66

  
63
DwC.self.specimens.csv: DwC-VegBIEN.specimens.csv
67
# deprecated
68
DwC-VegBIEN.specimens.no_empty.csv: DwC-VegBIEN.specimens.csv
69
	cp -p $< $@
70
joinMaps += DwC-VegBIEN.specimens.no_empty.csv
71

  
72
DwC.self.specimens.csv: DwC.ci-VegBIEN.specimens.csv
64 73
	$(selfMap) <$<|$(bin)/sort_map >$@
65 74
joinMaps += DwC.self.specimens.csv
66 75

  
67
DwC-VegBIEN.specimens.no_empty.csv: DwC-VegBIEN.specimens.csv
68
	$(removeEmpty) <$< >$@
69
joinMaps += DwC-VegBIEN.specimens.no_empty.csv
70

  
71 76
join_maps: $(joinMaps) ;
72 77

  
73 78
all += $(joinMaps)

Also available in: Unified diff