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Revision 1725

VegX-VegBIEN.organisms.csv: Renamed plotObservation user-defined field precipMm to precipitation to be consistent with VegBIEN

View differences:

inputs/SALVIAS-CSV/maps/VegX.plots.csv
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"elev_max_m","/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters",
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"elev_min_m","/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters",
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"temp_c","/temperature",
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"precip_mm","/simpleUserdefined[name=precipMm]/value",
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"precip_mm","/simpleUserdefined[name=precipitation]/value",
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"slope_aspect","/*UniqueIdentifierID->/*s/plot/slopeAspect",
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"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient",
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"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clayPercent]/value/_units:[default=""%"",to=]/value",
inputs/SALVIAS-CSV/maps/VegX.plots.full.csv
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"elev_max_m","/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters",
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"elev_min_m","/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters",
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"temp_c","/temperature",
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"precip_mm","/simpleUserdefined[name=precipMm]/value",
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"precip_mm","/simpleUserdefined[name=precipitation]/value",
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"slope_aspect","/*UniqueIdentifierID->/*s/plot/slopeAspect",
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"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient",
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"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clayPercent]/value/_units:[default=""%"",to=]/value",
inputs/SALVIAS/test/VegX.plots.xml.ref
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            <projectID>0</projectID>
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            <plotUniqueIdentifierID>0</plotUniqueIdentifierID>
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            <simpleUserdefined>
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                <name>precipMm</name>
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                <name>precipitation</name>
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                <value>2500.0</value>
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            </simpleUserdefined>
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            <simpleUserdefined>
......
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            <projectID>1</projectID>
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            <plotUniqueIdentifierID>1</plotUniqueIdentifierID>
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            <simpleUserdefined>
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                <name>precipMm</name>
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                <name>precipitation</name>
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                <value>866.0</value>
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            </simpleUserdefined>
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            <temperature>7.4</temperature>
inputs/SALVIAS/maps/VegX.plots.csv
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"Elev","/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation","Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick."
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"elev_max_m","/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters",
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"elev_min_m","/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters",
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"Precip","/simpleUserdefined[name=precipMm]/value",
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"Precip","/simpleUserdefined[name=precipitation]/value",
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"ElevSource",,
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"Temp","/temperature",
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"PrecipSource",,
inputs/SALVIAS/maps/VegX.plots.full.csv
21 21
"Elev","/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation","Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick."
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"elev_max_m","/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters",
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"elev_min_m","/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters",
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"Precip","/simpleUserdefined[name=precipMm]/value",
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"Precip","/simpleUserdefined[name=precipitation]/value",
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"ElevSource",,
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"Temp","/temperature",
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"PrecipSource",,
mappings/VegX-VegBIEN.plots.csv
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/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/parent_id/locationevent/authorlocationcode,
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/simpleUserdefined[name=parent]/value->/*s/plotObservation/partyWithRole/*ID->/parties/party/organizationName,/parent_id/locationevent:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,
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/simpleUserdefined[name=parent]/value->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/simpleUserdefined[name=sourceaccessioncode]/value,/parent_id/locationevent:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,
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/simpleUserdefined[name=precipMm]/value,/precipitation,
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/simpleUserdefined[name=precipitation]/value,/precipitation,
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->/*s/abioticObservation[*ID]/simpleUserdefined[name=acidity]/value,/soilobs/acidity,
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->/*s/abioticObservation[*ID]/simpleUserdefined[name=base]/value,/soilobs/basesaturation,
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->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value,/soilobs/calcium,
mappings/VegX-VegBIEN.organisms.csv
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/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*_id/locationevent/parent_id/locationevent/authorlocationcode,
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/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/partyWithRole/*ID->/parties/party/organizationName,/*_id/locationevent/parent_id/locationevent:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/datasource_id/party/organizationname/_alt/1,
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/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/simpleUserdefined[name=sourceaccessioncode]/value,/*_id/locationevent/parent_id/locationevent:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/sourceaccessioncode,
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/*ID->/*s/plotObservation/simpleUserdefined[name=precipMm]/value,/*_id/locationevent/precipitation,
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/*ID->/*s/plotObservation/simpleUserdefined[name=precipitation]/value,/*_id/locationevent/precipitation,
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/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=acidity]/value,/*_id/locationevent/soilobs/acidity,
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/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=base]/value,/*_id/locationevent/soilobs/basesaturation,
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/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value,/*_id/locationevent/soilobs/calcium,
mappings/for_review/VegX-VegBIEN.plots.csv
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//plot/plotUniqueIdentifier,//locationevent/authorlocationcode,
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//party/organizationName,//party/organizationname/_alt/1,
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//plotObservation/simpleUserdefined[name=sourceaccessioncode]/value,//locationevent/sourceaccessioncode,
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/simpleUserdefined[name=precipMm]/value,/precipitation,
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/simpleUserdefined[name=precipitation]/value,/precipitation,
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//*s/abioticObservation/simpleUserdefined[name=acidity]/value,//soilobs/acidity,
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//*s/abioticObservation/simpleUserdefined[name=base]/value,//soilobs/basesaturation,
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//*s/abioticObservation/simpleUserdefined[name=calcium]/value,//soilobs/calcium,
mappings/for_review/VegX-VegBIEN.organisms.csv
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//plot/plotUniqueIdentifier,//locationevent/authorlocationcode,
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//party/organizationName,//party/organizationname/_alt/1,
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//plotObservation/simpleUserdefined[name=sourceaccessioncode]/value,//locationevent/sourceaccessioncode,
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//plotObservation/simpleUserdefined[name=precipMm]/value,//locationevent/precipitation,
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//plotObservation/simpleUserdefined[name=precipitation]/value,//locationevent/precipitation,
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//*s/abioticObservation/simpleUserdefined[name=acidity]/value,//soilobs/acidity,
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//*s/abioticObservation/simpleUserdefined[name=base]/value,//soilobs/basesaturation,
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//*s/abioticObservation/simpleUserdefined[name=calcium]/value,//soilobs/calcium,

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