Revision 1727
Added by Aaron Marcuse-Kubitza over 12 years ago
| inputs/SALVIAS-CSV/maps/VegX.plots.csv | ||
|---|---|---|
| 16 | 16 |
"precip_mm","/simpleUserdefined[name=precipitation]/value", |
| 17 | 17 |
"slope_aspect","/*UniqueIdentifierID->/*s/plot/slopeAspect", |
| 18 | 18 |
"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient", |
| 19 |
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clayPercent]/value/_units:[default=""%"",to=]/value",
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|
| 19 |
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value", |
|
| 20 | 20 |
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value/_units:[default=""%"",to=]/value", |
| 21 | 21 |
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value/_units:[default=""%"",to=]/value", |
| 22 | 22 |
"organic_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=organicPercent]/value/_units:[default=""%"",to=]/value", |
| inputs/SALVIAS-CSV/maps/VegX.plots.full.csv | ||
|---|---|---|
| 16 | 16 |
"precip_mm","/simpleUserdefined[name=precipitation]/value", |
| 17 | 17 |
"slope_aspect","/*UniqueIdentifierID->/*s/plot/slopeAspect", |
| 18 | 18 |
"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient", |
| 19 |
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clayPercent]/value/_units:[default=""%"",to=]/value",
|
|
| 19 |
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value", |
|
| 20 | 20 |
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value/_units:[default=""%"",to=]/value", |
| 21 | 21 |
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value/_units:[default=""%"",to=]/value", |
| 22 | 22 |
"organic_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=organicPercent]/value/_units:[default=""%"",to=]/value", |
| inputs/SALVIAS/maps/VegX.plots.csv | ||
|---|---|---|
| 29 | 29 |
"bearing",, |
| 30 | 30 |
"slope_aspect","/*UniqueIdentifierID->/*s/plot/slopeAspect", |
| 31 | 31 |
"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient", |
| 32 |
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clayPercent]/value/_units:[default=""%"",to=]/value",
|
|
| 32 |
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value", |
|
| 33 | 33 |
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value/_units:[default=""%"",to=]/value", |
| 34 | 34 |
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value/_units:[default=""%"",to=]/value", |
| 35 | 35 |
"pH","->/*s/abioticObservation[*ID]/ph","Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss." |
| inputs/SALVIAS/maps/VegX.plots.full.csv | ||
|---|---|---|
| 29 | 29 |
"bearing",, |
| 30 | 30 |
"slope_aspect","/*UniqueIdentifierID->/*s/plot/slopeAspect", |
| 31 | 31 |
"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient", |
| 32 |
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clayPercent]/value/_units:[default=""%"",to=]/value",
|
|
| 32 |
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value", |
|
| 33 | 33 |
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value/_units:[default=""%"",to=]/value", |
| 34 | 34 |
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value/_units:[default=""%"",to=]/value", |
| 35 | 35 |
"pH","->/*s/abioticObservation[*ID]/ph","Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss." |
| mappings/VegX-VegBIEN.plots.csv | ||
|---|---|---|
| 30 | 30 |
->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value,/soilobs/calcium, |
| 31 | 31 |
->/*s/abioticObservation[*ID]/simpleUserdefined[name=carbon]/value,/soilobs/carbon, |
| 32 | 32 |
->/*s/abioticObservation[*ID]/simpleUserdefined[name=cationExchangeCapacity]/value,/soilobs/cationexchangecapacity, |
| 33 |
->/*s/abioticObservation[*ID]/simpleUserdefined[name=clayPercent]/value,/soilobs/clay,
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|
| 33 |
->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value,/soilobs/clay, |
|
| 34 | 34 |
->/*s/abioticObservation[*ID]/simpleUserdefined[name=conductivity]/value,/soilobs/conductivity, |
| 35 | 35 |
->/*s/abioticObservation[*ID]/magnesium,/soilobs/magnesium, |
| 36 | 36 |
->/*s/abioticObservation[*ID]/nitrogen,/soilobs/nitrogen, |
| mappings/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 30 | 30 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value,/*_id/locationevent/soilobs/calcium, |
| 31 | 31 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=carbon]/value,/*_id/locationevent/soilobs/carbon, |
| 32 | 32 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=cationExchangeCapacity]/value,/*_id/locationevent/soilobs/cationexchangecapacity, |
| 33 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=clayPercent]/value,/*_id/locationevent/soilobs/clay,
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| 33 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value,/*_id/locationevent/soilobs/clay, |
|
| 34 | 34 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=conductivity]/value,/*_id/locationevent/soilobs/conductivity, |
| 35 | 35 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/magnesium,/*_id/locationevent/soilobs/magnesium, |
| 36 | 36 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/nitrogen,/*_id/locationevent/soilobs/nitrogen, |
| mappings/for_review/VegX-VegBIEN.plots.csv | ||
|---|---|---|
| 30 | 30 |
//*s/abioticObservation/simpleUserdefined[name=calcium]/value,//soilobs/calcium, |
| 31 | 31 |
//*s/abioticObservation/simpleUserdefined[name=carbon]/value,//soilobs/carbon, |
| 32 | 32 |
//*s/abioticObservation/simpleUserdefined[name=cationExchangeCapacity]/value,//soilobs/cationexchangecapacity, |
| 33 |
//*s/abioticObservation/simpleUserdefined[name=clayPercent]/value,//soilobs/clay,
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| 33 |
//*s/abioticObservation/simpleUserdefined[name=clay]/value,//soilobs/clay, |
|
| 34 | 34 |
//*s/abioticObservation/simpleUserdefined[name=conductivity]/value,//soilobs/conductivity, |
| 35 | 35 |
//*s/abioticObservation/magnesium,//soilobs/magnesium, |
| 36 | 36 |
//*s/abioticObservation/nitrogen,//soilobs/nitrogen, |
| mappings/for_review/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 30 | 30 |
//*s/abioticObservation/simpleUserdefined[name=calcium]/value,//soilobs/calcium, |
| 31 | 31 |
//*s/abioticObservation/simpleUserdefined[name=carbon]/value,//soilobs/carbon, |
| 32 | 32 |
//*s/abioticObservation/simpleUserdefined[name=cationExchangeCapacity]/value,//soilobs/cationexchangecapacity, |
| 33 |
//*s/abioticObservation/simpleUserdefined[name=clayPercent]/value,//soilobs/clay,
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| 33 |
//*s/abioticObservation/simpleUserdefined[name=clay]/value,//soilobs/clay, |
|
| 34 | 34 |
//*s/abioticObservation/simpleUserdefined[name=conductivity]/value,//soilobs/conductivity, |
| 35 | 35 |
//*s/abioticObservation/magnesium,//soilobs/magnesium, |
| 36 | 36 |
//*s/abioticObservation/nitrogen,//soilobs/nitrogen, |
Also available in: Unified diff
VegX-VegBIEN.organisms.csv: Renamed abioticObservation user-defined field clayPercent to clay to be consistent with VegBIEN