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Revision 1730

Added by Aaron Marcuse-Kubitza almost 13 years ago

VegX-VegBIEN.organisms.csv: Renamed abioticObservation user-defined field sandPercent to sand to be consistent with VegBIEN

View differences:

inputs/SALVIAS-CSV/maps/VegX.plots.csv
18 18 
"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient",
19 19 
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value",
20 20 
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value/_units:[default=""%"",to=]/value",
21 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value/_units:[default=""%"",to=]/value",
21 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value/_units:[default=""%"",to=]/value",
22 22 
"organic_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=organic]/value/_units:[default=""%"",to=]/value",
23 23 
"pH","->/*s/abioticObservation[*ID]/ph","Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss."
24 24 
"soil_N","->/*s/abioticObservation[*ID]/nitrogen/_units:[default=""%"",to=]/value",
inputs/SALVIAS-CSV/maps/VegX.plots.full.csv
18 18 
"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient",
19 19 
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value",
20 20 
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value/_units:[default=""%"",to=]/value",
21 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value/_units:[default=""%"",to=]/value",
21 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value/_units:[default=""%"",to=]/value",
22 22 
"organic_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=organic]/value/_units:[default=""%"",to=]/value",
23 23 
"pH","->/*s/abioticObservation[*ID]/ph","Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss."
24 24 
"soil_N","->/*s/abioticObservation[*ID]/nitrogen/_units:[default=""%"",to=]/value",
inputs/SALVIAS/maps/VegX.plots.csv
31 31 
"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient",
32 32 
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value",
33 33 
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value/_units:[default=""%"",to=]/value",
34 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value/_units:[default=""%"",to=]/value",
34 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value/_units:[default=""%"",to=]/value",
35 35 
"pH","->/*s/abioticObservation[*ID]/ph","Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss."
36 36 
"soil_N","->/*s/abioticObservation[*ID]/nitrogen/_units:[default=""%"",to=]/value",
37 37 
"soil_P","->/*s/abioticObservation[*ID]/phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",
inputs/SALVIAS/maps/VegX.plots.full.csv
31 31 
"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient",
32 32 
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value",
33 33 
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value/_units:[default=""%"",to=]/value",
34 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value/_units:[default=""%"",to=]/value",
34 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value/_units:[default=""%"",to=]/value",
35 35 
"pH","->/*s/abioticObservation[*ID]/ph","Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss."
36 36 
"soil_N","->/*s/abioticObservation[*ID]/nitrogen/_units:[default=""%"",to=]/value",
37 37 
"soil_P","->/*s/abioticObservation[*ID]/phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",
mappings/VegX-VegBIEN.plots.csv
38 38 
->/*s/abioticObservation[*ID]/ph,/soilobs/ph,
39 39 
->/*s/abioticObservation[*ID]/phosphorus,/soilobs/phosphorus,
40 40 
->/*s/abioticObservation[*ID]/potassium,/soilobs/potassium,
41 
->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value,/soilobs/sand,
41 
->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value,/soilobs/sand,
42 42 
->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value,/soilobs/silt,
43 43 
->/*s/abioticObservation[*ID]/simpleUserdefined[name=sodium]/value,/soilobs/sodium,
44 44 
->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value,/soilobs/texture,
mappings/VegX-VegBIEN.organisms.csv
38 38 
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/ph,/*_id/locationevent/soilobs/ph,
39 39 
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/phosphorus,/*_id/locationevent/soilobs/phosphorus,
40 40 
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/potassium,/*_id/locationevent/soilobs/potassium,
41 
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sandPercent]/value,/*_id/locationevent/soilobs/sand,
41 
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value,/*_id/locationevent/soilobs/sand,
42 42 
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=siltPercent]/value,/*_id/locationevent/soilobs/silt,
43 43 
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sodium]/value,/*_id/locationevent/soilobs/sodium,
44 44 
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value,/*_id/locationevent/soilobs/texture,
mappings/for_review/VegX-VegBIEN.plots.csv
38 38 
//*s/abioticObservation/ph,//soilobs/ph,
39 39 
//*s/abioticObservation/phosphorus,//soilobs/phosphorus,
40 40 
//*s/abioticObservation/potassium,//soilobs/potassium,
41 
//*s/abioticObservation/simpleUserdefined[name=sandPercent]/value,//soilobs/sand,
41 
//*s/abioticObservation/simpleUserdefined[name=sand]/value,//soilobs/sand,
42 42 
//*s/abioticObservation/simpleUserdefined[name=siltPercent]/value,//soilobs/silt,
43 43 
//*s/abioticObservation/simpleUserdefined[name=sodium]/value,//soilobs/sodium,
44 44 
//*s/abioticObservation/simpleUserdefined[name=texture]/value,//soilobs/texture,
mappings/for_review/VegX-VegBIEN.organisms.csv
38 38 
//*s/abioticObservation/ph,//soilobs/ph,
39 39 
//*s/abioticObservation/phosphorus,//soilobs/phosphorus,
40 40 
//*s/abioticObservation/potassium,//soilobs/potassium,
41 
//*s/abioticObservation/simpleUserdefined[name=sandPercent]/value,//soilobs/sand,
41 
//*s/abioticObservation/simpleUserdefined[name=sand]/value,//soilobs/sand,
42 42 
//*s/abioticObservation/simpleUserdefined[name=siltPercent]/value,//soilobs/silt,
43 43 
//*s/abioticObservation/simpleUserdefined[name=sodium]/value,//soilobs/sodium,
44 44 
//*s/abioticObservation/simpleUserdefined[name=texture]/value,//soilobs/texture,

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