Revision 1737
Added by Aaron Marcuse-Kubitza over 12 years ago
| inputs/SALVIAS-CSV/maps/VegX.organisms.csv | ||
|---|---|---|
| 38 | 38 |
"stem_tag2","/*ID->/*s/individualOrganism/identificationLabel","Brad: see above" |
| 39 | 39 |
"stem_dbh","/diameterBaseDistance[baseDistance/value=1.37]/diameter", |
| 40 | 40 |
"basal_diam","/diameterBaseDistance[baseDistance/value=0]/diameter", |
| 41 |
"stem_height_m","/simpleUserdefined[name=stemHeightM]/value","Brad: Same as for height, but applies to individuals stems, not trees. Rare."
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|
| 42 |
"stem_height_first_branch_m","/simpleUserdefined[name=stemHeightFirstBranchM]/value","Brad: Should also be userDefined for VegBank. Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare."
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| 43 |
"stem_canopy_form","/simpleUserdefined[name=stemCanopyForm]/value","Brad: Should also be userDefined for VegBank. "
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| 44 |
"stem_canopy_position","/simpleUserdefined[name=stemCanopyPosition]/value","Brad: Should also be userDefined for VegBank. "
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| 45 |
"stem_liana_infestation","/simpleUserdefined[name=stemLianaInfestation]/value","Brad: Should also be userDefined for VegBank. "
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| 41 |
"stem_height_m","/simpleUserdefined[name=height]/value","Brad: Same as for height, but applies to individuals stems, not trees. Rare."
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| 42 |
"stem_height_first_branch_m","/simpleUserdefined[name=heightFirstBranch]/value","Brad: Should also be userDefined for VegBank. Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare."
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| 43 |
"stem_canopy_form","/simpleUserdefined[name=canopyForm]/value","Brad: Should also be userDefined for VegBank. "
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| 44 |
"stem_canopy_position","/simpleUserdefined[name=canopyPosition]/value","Brad: Should also be userDefined for VegBank. "
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| 45 |
"stem_liana_infestation","/simpleUserdefined[name=lianaInfestation]/value","Brad: Should also be userDefined for VegBank. "
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| 46 | 46 |
"notes","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text", |
| 47 | 47 |
"orig_family","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","Brad: OMIT" |
| 48 | 48 |
"orig_species","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=binom])/Name/_name/last","Brad: OMIT" |
| inputs/SALVIAS-CSV/maps/VegX.organisms.full.csv | ||
|---|---|---|
| 38 | 38 |
"stem_tag2","/*ID->/*s/individualOrganism/identificationLabel","Brad: see above" |
| 39 | 39 |
"stem_dbh","/diameterBaseDistance[baseDistance/value=1.37]/diameter", |
| 40 | 40 |
"basal_diam","/diameterBaseDistance[baseDistance/value=0]/diameter", |
| 41 |
"stem_height_m","/simpleUserdefined[name=stemHeightM]/value","Brad: Same as for height, but applies to individuals stems, not trees. Rare."
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| 42 |
"stem_height_first_branch_m","/simpleUserdefined[name=stemHeightFirstBranchM]/value","Brad: Should also be userDefined for VegBank. Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare."
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| 43 |
"stem_canopy_form","/simpleUserdefined[name=stemCanopyForm]/value","Brad: Should also be userDefined for VegBank. "
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| 44 |
"stem_canopy_position","/simpleUserdefined[name=stemCanopyPosition]/value","Brad: Should also be userDefined for VegBank. "
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| 45 |
"stem_liana_infestation","/simpleUserdefined[name=stemLianaInfestation]/value","Brad: Should also be userDefined for VegBank. "
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| 41 |
"stem_height_m","/simpleUserdefined[name=height]/value","Brad: Same as for height, but applies to individuals stems, not trees. Rare."
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| 42 |
"stem_height_first_branch_m","/simpleUserdefined[name=heightFirstBranch]/value","Brad: Should also be userDefined for VegBank. Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare."
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| 43 |
"stem_canopy_form","/simpleUserdefined[name=canopyForm]/value","Brad: Should also be userDefined for VegBank. "
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| 44 |
"stem_canopy_position","/simpleUserdefined[name=canopyPosition]/value","Brad: Should also be userDefined for VegBank. "
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| 45 |
"stem_liana_infestation","/simpleUserdefined[name=lianaInfestation]/value","Brad: Should also be userDefined for VegBank. "
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| 46 | 46 |
"notes","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text", |
| 47 | 47 |
"orig_family","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","Brad: OMIT" |
| 48 | 48 |
"orig_species","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=binom])/Name/_name/last","Brad: OMIT" |
| inputs/SALVIAS/maps/VegX.stems.csv | ||
|---|---|---|
| 9 | 9 |
"stem_notes","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text", |
| 10 | 10 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel", |
| 11 | 11 |
"stem_tag2","/simpleUserdefined[name=tag2]/value", |
| 12 |
"stem_height_m","/simpleUserdefined[name=stemHeightM]/value",
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| 13 |
"stem_height_first_branch_m","/simpleUserdefined[name=stemHeightFirstBranchM]/value",
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| 14 |
"stem_canopy_form","/simpleUserdefined[name=stemCanopyForm]/value",
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| 15 |
"stem_canopy_position","/simpleUserdefined[name=stemCanopyPosition]/value",
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| 16 |
"stem_liana_infestation","/simpleUserdefined[name=stemLianaInfestation]/value",
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| 12 |
"stem_height_m","/simpleUserdefined[name=height]/value",
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| 13 |
"stem_height_first_branch_m","/simpleUserdefined[name=heightFirstBranch]/value",
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| 14 |
"stem_canopy_form","/simpleUserdefined[name=canopyForm]/value",
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| 15 |
"stem_canopy_position","/simpleUserdefined[name=canopyPosition]/value",
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| 16 |
"stem_liana_infestation","/simpleUserdefined[name=lianaInfestation]/value",
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| 17 | 17 |
"tmp_del",, |
| inputs/SALVIAS/maps/VegX.stems.full.csv | ||
|---|---|---|
| 9 | 9 |
"stem_notes","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text", |
| 10 | 10 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel", |
| 11 | 11 |
"stem_tag2","/simpleUserdefined[name=tag2]/value", |
| 12 |
"stem_height_m","/simpleUserdefined[name=stemHeightM]/value",
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| 13 |
"stem_height_first_branch_m","/simpleUserdefined[name=stemHeightFirstBranchM]/value",
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| 14 |
"stem_canopy_form","/simpleUserdefined[name=stemCanopyForm]/value",
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| 15 |
"stem_canopy_position","/simpleUserdefined[name=stemCanopyPosition]/value",
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| 16 |
"stem_liana_infestation","/simpleUserdefined[name=stemLianaInfestation]/value",
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| 12 |
"stem_height_m","/simpleUserdefined[name=height]/value",
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| 13 |
"stem_height_first_branch_m","/simpleUserdefined[name=heightFirstBranch]/value",
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| 14 |
"stem_canopy_form","/simpleUserdefined[name=canopyForm]/value",
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| 15 |
"stem_canopy_position","/simpleUserdefined[name=canopyPosition]/value",
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| 16 |
"stem_liana_infestation","/simpleUserdefined[name=lianaInfestation]/value",
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| 17 | 17 |
"tmp_del",, |
| mappings/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 53 | 53 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType",/_ignore/voucherType, |
| 54 | 54 |
/simpleUserdefined[name=authorPlantCode]/value,/aggregateoccurrence/*_id/plantobservation/authorplantcode, |
| 55 | 55 |
/height,/aggregateoccurrence/*_id/plantobservation/overallheight, |
| 56 |
/simpleUserdefined[name=stemHeightM]/value,/aggregateoccurrence/*_id/plantobservation/overallheight,
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| 56 |
/simpleUserdefined[name=height]/value,/aggregateoccurrence/*_id/plantobservation/overallheight,
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| 57 | 57 |
:[*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/simpleUserdefined[name=sourceAccessionCode]/value,/aggregateoccurrence/*_id/plantobservation/sourceaccessioncode, |
| 58 | 58 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/relatedItem[relationshipType=stemParent]/relatedItemID->/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/voucher,/aggregateoccurrence/*_id/plantobservation/stemobservation/*_id/plantobservation/authorplantcode, |
| 59 | 59 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=count]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/*_id/plantobservation/stemcount, |
| 60 | 60 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/diameterBaseDistance[baseDistance/value=0]/diameter,/aggregateoccurrence/*_id/plantobservation/stemobservation/basaldiameter, |
| 61 | 61 |
/diameterBaseDistance[baseDistance/value=0]/diameter,/aggregateoccurrence/*_id/plantobservation/stemobservation/basaldiameter, |
| 62 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemCanopyForm]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
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| 62 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=canopyForm]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
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| 63 | 63 |
/simpleUserdefined[name=canopyForm]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue", |
| 64 |
/simpleUserdefined[name=stemCanopyForm]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
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| 65 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemCanopyPosition]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
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| 64 |
/simpleUserdefined[name=canopyForm]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
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| 65 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=canopyPosition]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
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| 66 | 66 |
/simpleUserdefined[name=canopyPosition]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue", |
| 67 |
/simpleUserdefined[name=stemCanopyPosition]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
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| 67 |
/simpleUserdefined[name=canopyPosition]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
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| 68 | 68 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/diameterBaseDistance[baseDistance[*ID/*s/attribute/quantitative/*ID/*s/method(/name=Gentry)]/value=1.37]/diameter,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue", |
| 69 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemLianaInfestation]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
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| 69 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=lianaInfestation]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
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| 70 | 70 |
/simpleUserdefined[name=lianaInfestation]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue", |
| 71 |
/simpleUserdefined[name=stemLianaInfestation]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
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| 71 |
/simpleUserdefined[name=lianaInfestation]/value,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
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|
| 72 | 72 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue", |
| 73 | 73 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue", |
| 74 | 74 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/diameterBaseDistance[baseDistance[!attributeID]/value=1.37]/diameter,/aggregateoccurrence/*_id/plantobservation/stemobservation/diameterbreastheight, |
| 75 | 75 |
/diameterBaseDistance[baseDistance/value=1.37]/diameter,/aggregateoccurrence/*_id/plantobservation/stemobservation/diameterbreastheight, |
| 76 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemHeightM]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/height,
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|
| 77 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemHeightFirstBranchM]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch,
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| 76 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=height]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/height,
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| 77 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=heightFirstBranch]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch,
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| 78 | 78 |
/simpleUserdefined[name=heightFirstBranch]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch, |
| 79 |
/simpleUserdefined[name=stemHeightFirstBranchM]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch,
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| 79 |
/simpleUserdefined[name=heightFirstBranch]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch,
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| 80 | 80 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/identificationLabel,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2 |
| 81 | 81 |
/*ID->/*s/individualOrganism/identificationLabel,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2 |
| 82 | 82 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=tag2]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag, |
| mappings/for_review/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 53 | 53 |
//*s/taxonDetermination[role=collector]/groupType,/_ignore/voucherType, |
| 54 | 54 |
/simpleUserdefined[name=authorPlantCode]/value,//plantobservation/authorplantcode, |
| 55 | 55 |
/height,//plantobservation/overallheight, |
| 56 |
/simpleUserdefined[name=stemHeightM]/value,//plantobservation/overallheight,
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| 56 |
/simpleUserdefined[name=height]/value,//plantobservation/overallheight,
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| 57 | 57 |
/simpleUserdefined[name=sourceAccessionCode]/value,//plantobservation/sourceaccessioncode, |
| 58 | 58 |
//taxonNameUsageConcept/voucher,//plantobservation/authorplantcode, |
| 59 | 59 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=count]/value,//plantobservation/stemcount, |
| 60 | 60 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/diameterBaseDistance[value=0]/diameter,//stemobservation/basaldiameter, |
| 61 | 61 |
/diameterBaseDistance[value=0]/diameter,//stemobservation/basaldiameter, |
| 62 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemCanopyForm]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
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| 62 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=canopyForm]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
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| 63 | 63 |
/simpleUserdefined[name=canopyForm]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue", |
| 64 |
/simpleUserdefined[name=stemCanopyForm]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
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| 65 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemCanopyPosition]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
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| 64 |
/simpleUserdefined[name=canopyForm]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
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| 65 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=canopyPosition]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
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| 66 | 66 |
/simpleUserdefined[name=canopyPosition]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue", |
| 67 |
/simpleUserdefined[name=stemCanopyPosition]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
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| 67 |
/simpleUserdefined[name=canopyPosition]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
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| 68 | 68 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/diameterBaseDistance[baseDistance[*ID/*s/attribute/quantitative/*ID/*s/method(/name=Gentry)]/value=1.37]/diameter,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]/definedvalue", |
| 69 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemLianaInfestation]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
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| 69 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=lianaInfestation]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
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| 70 | 70 |
/simpleUserdefined[name=lianaInfestation]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue", |
| 71 |
/simpleUserdefined[name=stemLianaInfestation]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
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| 71 |
/simpleUserdefined[name=lianaInfestation]/value,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
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| 72 | 72 |
//note/text,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]/definedvalue", |
| 73 | 73 |
//note/text,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]/definedvalue", |
| 74 | 74 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/diameterBaseDistance[baseDistance[]/value=1.37]/diameter,//stemobservation/diameterbreastheight, |
| 75 | 75 |
/diameterBaseDistance[value=1.37]/diameter,//stemobservation/diameterbreastheight, |
| 76 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemHeightM]/value,//stemobservation/height,
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| 77 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=stemHeightFirstBranchM]/value,//stemobservation/heightfirstbranch,
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| 76 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=height]/value,//stemobservation/height,
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| 77 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=heightFirstBranch]/value,//stemobservation/heightfirstbranch,
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| 78 | 78 |
/simpleUserdefined[name=heightFirstBranch]/value,//stemobservation/heightfirstbranch, |
| 79 |
/simpleUserdefined[name=stemHeightFirstBranchM]/value,//stemobservation/heightfirstbranch,
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| 79 |
/simpleUserdefined[name=heightFirstBranch]/value,//stemobservation/heightfirstbranch,
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| 80 | 80 |
//individualOrganism/identificationLabel,"//stemobservation/stemtag[""""/2=true]/tag",Quotes sort it before tag2 |
| 81 | 81 |
//individualOrganism/identificationLabel,"//stemobservation/stemtag[""""/2=true]/tag",Quotes sort it before tag2 |
| 82 | 82 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=tag2]/value,//stemobservation/stemtag[iscurrent=true]:[../stemtag?[2=true]/1=false]/tag, |
| mappings/for_review/VegX-VegBIEN.stems.csv | ||
|---|---|---|
| 2 | 2 |
//taxonNameUsageConcept/voucher,//plantobservation/authorplantcode, |
| 3 | 3 |
/simpleUserdefined[name=count]/value,//plantobservation/stemcount, |
| 4 | 4 |
/diameterBaseDistance[value=0]/diameter,/basaldiameter, |
| 5 |
/simpleUserdefined[name=stemCanopyForm]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
|
|
| 6 |
/simpleUserdefined[name=stemCanopyPosition]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
|
|
| 5 |
/simpleUserdefined[name=canopyForm]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
|
|
| 6 |
/simpleUserdefined[name=canopyPosition]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
|
|
| 7 | 7 |
/diameterBaseDistance[baseDistance[*ID/*s/attribute/quantitative/*ID/*s/method(/name=Gentry)]/value=1.37]/diameter,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]/definedvalue", |
| 8 |
/simpleUserdefined[name=stemLianaInfestation]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
|
|
| 8 |
/simpleUserdefined[name=lianaInfestation]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
|
|
| 9 | 9 |
//note/text,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]/definedvalue", |
| 10 | 10 |
/diameterBaseDistance[baseDistance[]/value=1.37]/diameter,/diameterbreastheight, |
| 11 |
/simpleUserdefined[name=stemHeightM]/value,/height,
|
|
| 12 |
/simpleUserdefined[name=stemHeightFirstBranchM]/value,/heightfirstbranch,
|
|
| 11 |
/simpleUserdefined[name=height]/value,/height,
|
|
| 12 |
/simpleUserdefined[name=heightFirstBranch]/value,/heightfirstbranch,
|
|
| 13 | 13 |
//individualOrganism/identificationLabel,"/stemtag[""""/2=true]/tag",Quotes sort it before tag2 |
| 14 | 14 |
/simpleUserdefined[name=tag2]/value,/stemtag[iscurrent=true]:[../stemtag?[2=true]/1=false]/tag, |
| mappings/VegX-VegBIEN.stems.csv | ||
|---|---|---|
| 2 | 2 |
/relatedItem[relationshipType=stemParent]/relatedItemID->/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/voucher,/*_id/plantobservation/authorplantcode, |
| 3 | 3 |
/simpleUserdefined[name=count]/value,/*_id/plantobservation/stemcount, |
| 4 | 4 |
/diameterBaseDistance[baseDistance/value=0]/diameter,/basaldiameter, |
| 5 |
/simpleUserdefined[name=stemCanopyForm]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
|
|
| 6 |
/simpleUserdefined[name=stemCanopyPosition]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
|
|
| 5 |
/simpleUserdefined[name=canopyForm]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
|
|
| 6 |
/simpleUserdefined[name=canopyPosition]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
|
|
| 7 | 7 |
/diameterBaseDistance[baseDistance[*ID/*s/attribute/quantitative/*ID/*s/method(/name=Gentry)]/value=1.37]/diameter,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue", |
| 8 |
/simpleUserdefined[name=stemLianaInfestation]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
|
|
| 8 |
/simpleUserdefined[name=lianaInfestation]/value,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
|
|
| 9 | 9 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text,"/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue", |
| 10 | 10 |
/diameterBaseDistance[baseDistance[!attributeID]/value=1.37]/diameter,/diameterbreastheight, |
| 11 |
/simpleUserdefined[name=stemHeightM]/value,/height,
|
|
| 12 |
/simpleUserdefined[name=stemHeightFirstBranchM]/value,/heightfirstbranch,
|
|
| 11 |
/simpleUserdefined[name=height]/value,/height,
|
|
| 12 |
/simpleUserdefined[name=heightFirstBranch]/value,/heightfirstbranch,
|
|
| 13 | 13 |
/*ID->/*s/individualOrganism/identificationLabel,"/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2 |
| 14 | 14 |
/simpleUserdefined[name=tag2]/value,/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag, |
Also available in: Unified diff
VegX-VegBIEN.organisms.csv: Renamed individualOrganismObservation user-defined fields stem* to remove the stem* prefix to be consistent with VegBIEN