Revision 1756
Added by Aaron Marcuse-Kubitza about 12 years ago
| inputs/SALVIAS-CSV/test/VegX.organisms.xml.ref | ||
|---|---|---|
| 17 | 17 |
<value>10</value> |
| 18 | 18 |
</simpleUserdefined> |
| 19 | 19 |
<simpleUserdefined> |
| 20 |
<name>identificationLabel2</name> |
|
| 21 |
<value>8</value> |
|
| 22 |
</simpleUserdefined> |
|
| 23 |
<simpleUserdefined> |
|
| 24 | 20 |
<name>growthForm</name> |
| 25 | 21 |
<value>tree</value> |
| 26 | 22 |
</simpleUserdefined> |
| ... | ... | |
| 45 | 41 |
<value>100</value> |
| 46 | 42 |
</simpleUserdefined> |
| 47 | 43 |
<simpleUserdefined> |
| 48 |
<name>identificationLabel2</name> |
|
| 49 |
<value>91</value> |
|
| 50 |
</simpleUserdefined> |
|
| 51 |
<simpleUserdefined> |
|
| 52 | 44 |
<name>growthForm</name> |
| 53 | 45 |
<value>tree</value> |
| 54 | 46 |
</simpleUserdefined> |
| ... | ... | |
| 61 | 53 |
<individualOrganisms> |
| 62 | 54 |
<individualOrganism id="0"> |
| 63 | 55 |
<taxonNameUsageConceptsID>0</taxonNameUsageConceptsID> |
| 64 |
<identificationLabel>7</identificationLabel> |
|
| 56 |
<identificationLabel id="1">7</identificationLabel> |
|
| 57 |
<identificationLabel id="2">8</identificationLabel> |
|
| 65 | 58 |
</individualOrganism> |
| 66 | 59 |
<individualOrganism id="1"> |
| 67 | 60 |
<taxonNameUsageConceptsID>1</taxonNameUsageConceptsID> |
| 68 |
<identificationLabel>84</identificationLabel> |
|
| 61 |
<identificationLabel id="1">84</identificationLabel> |
|
| 62 |
<identificationLabel id="2">91</identificationLabel> |
|
| 69 | 63 |
</individualOrganism> |
| 70 | 64 |
</individualOrganisms> |
| 71 | 65 |
<taxonNameUsageConcepts> |
| inputs/SALVIAS-CSV/maps/VegX.organisms.csv | ||
|---|---|---|
| 7 | 7 |
"subplot","/*ID->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier", |
| 8 | 8 |
"individual_code","/simpleUserdefined[name=authorPlantCode]/value","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
| 9 | 9 |
"ind_id",,"Brad: OMIT" |
| 10 |
"tag1","/*ID->/*s/individualOrganism/identificationLabel","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once." |
|
| 11 |
"tag2","/simpleUserdefined[name=identificationLabel2]/value","Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 10 |
"tag1","/*ID->/*s/individualOrganism/identificationLabel[@id=1]/_alt/1","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."
|
|
| 11 |
"tag2","/*ID->/*s/individualOrganism/identificationLabel[@id=2]/_alt/1","Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 12 | 12 |
"x_position","/relativePlotPosition/relativeX","Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX." |
| 13 | 13 |
"y_position","/relativePlotPosition/relativeY","Brad: See comment above for x_position" |
| 14 | 14 |
"voucher_string","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/voucher/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below." |
| ... | ... | |
| 34 | 34 |
"intercept_cm","/volumeCanopy/value","Brad: Incorrect for VegBank This is an aggregate observation. Used in line-intercept methodology only, describes the point along centerline at which an individual intercepts the center line of the plot. Used to determin relative abundance." |
| 35 | 35 |
"height_m","/height","Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob" |
| 36 | 36 |
"ht_first_branch_m","/simpleUserdefined[name=heightFirstBranch]/value","Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob" |
| 37 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel","Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems." |
|
| 38 |
"stem_tag2","/*ID->/*s/individualOrganism/identificationLabel","Brad: see above" |
|
| 37 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel[@id=1]/_alt/2","Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems."
|
|
| 38 |
"stem_tag2","/*ID->/*s/individualOrganism/identificationLabel[@id=2]/_alt/2","Brad: see above"
|
|
| 39 | 39 |
"stem_dbh","/diameterBaseDistance[baseDistance/value=1.37]/diameter", |
| 40 | 40 |
"basal_diam","/diameterBaseDistance[baseDistance/value=0]/diameter", |
| 41 | 41 |
"stem_height_m","/simpleUserdefined[name=height]/value","Brad: Same as for height, but applies to individuals stems, not trees. Rare." |
| inputs/SALVIAS-CSV/maps/VegX.organisms.full.csv | ||
|---|---|---|
| 7 | 7 |
"subplot","/*ID->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier", |
| 8 | 8 |
"individual_code","/simpleUserdefined[name=authorPlantCode]/value","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
| 9 | 9 |
"ind_id",,"Brad: OMIT" |
| 10 |
"tag1","/*ID->/*s/individualOrganism/identificationLabel","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once." |
|
| 11 |
"tag2","/simpleUserdefined[name=identificationLabel2]/value","Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 10 |
"tag1","/*ID->/*s/individualOrganism/identificationLabel[@id=1]/_alt/1","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."
|
|
| 11 |
"tag2","/*ID->/*s/individualOrganism/identificationLabel[@id=2]/_alt/1","Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 12 | 12 |
"x_position","/relativePlotPosition/relativeX","Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX." |
| 13 | 13 |
"y_position","/relativePlotPosition/relativeY","Brad: See comment above for x_position" |
| 14 | 14 |
"voucher_string","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/voucher/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below." |
| ... | ... | |
| 34 | 34 |
"intercept_cm","/volumeCanopy/value","Brad: Incorrect for VegBank This is an aggregate observation. Used in line-intercept methodology only, describes the point along centerline at which an individual intercepts the center line of the plot. Used to determin relative abundance." |
| 35 | 35 |
"height_m","/height","Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob" |
| 36 | 36 |
"ht_first_branch_m","/simpleUserdefined[name=heightFirstBranch]/value","Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob" |
| 37 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel","Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems." |
|
| 38 |
"stem_tag2","/*ID->/*s/individualOrganism/identificationLabel","Brad: see above" |
|
| 37 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel[@id=1]/_alt/2","Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems."
|
|
| 38 |
"stem_tag2","/*ID->/*s/individualOrganism/identificationLabel[@id=2]/_alt/2","Brad: see above"
|
|
| 39 | 39 |
"stem_dbh","/diameterBaseDistance[baseDistance/value=1.37]/diameter", |
| 40 | 40 |
"basal_diam","/diameterBaseDistance[baseDistance/value=0]/diameter", |
| 41 | 41 |
"stem_height_m","/simpleUserdefined[name=height]/value","Brad: Same as for height, but applies to individuals stems, not trees. Rare." |
| inputs/SALVIAS-CSV/maps/VegBIEN.organisms.csv | ||
|---|---|---|
| 18 | 18 |
stem_dbh,/aggregateoccurrence/*_id/plantobservation/stemobservation/diameterbreastheight, |
| 19 | 19 |
ht_first_branch_m,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob |
| 20 | 20 |
stem_height_first_branch_m,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch,"Brad: Should also be userDefined for VegBank. Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare." |
| 21 |
stem_tag1,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag","Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems.; Quotes sort it before tag2"
|
|
| 22 |
stem_tag2,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Brad: see above; Quotes sort it before tag2
|
|
| 23 |
tag1,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once.; Quotes sort it before tag2"
|
|
| 24 |
tag2,/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,"Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 21 |
tag1,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag/_alt/1","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once.; Quotes sort it before tag2"
|
|
| 22 |
stem_tag1,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag/_alt/2","Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems.; Quotes sort it before tag2"
|
|
| 23 |
tag2,/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag/_alt/1,"Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 24 |
stem_tag2,/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag/_alt/2,Brad: see above
|
|
| 25 | 25 |
x_position,/aggregateoccurrence/*_id/plantobservation/stemobservation/xposition,"Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX." |
| 26 | 26 |
y_position,/aggregateoccurrence/*_id/plantobservation/stemobservation/yposition,Brad: See comment above for x_position |
| 27 | 27 |
no_of_individuals,/aggregateoccurrence/count,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this." |
| inputs/SALVIAS/maps/VegX.organisms.csv | ||
|---|---|---|
| 8 | 8 |
"Line","/*ID->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier", |
| 9 | 9 |
"Ind","/simpleUserdefined[name=authorPlantCode]/value","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
| 10 | 10 |
"ind_id",,"Brad: OMIT" |
| 11 |
"tag1","/*ID->/*s/individualOrganism/identificationLabel","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once." |
|
| 12 |
"tag2","/simpleUserdefined[name=identificationLabel2]/value","Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 11 |
"tag1","/*ID->/*s/individualOrganism/identificationLabel[@id=1]","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."
|
|
| 12 |
"tag2","/*ID->/*s/individualOrganism/identificationLabel[@id=2]","Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 13 | 13 |
"x_position","/relativePlotPosition/relativeX","Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX." |
| 14 | 14 |
"y_position","/relativePlotPosition/relativeY","Brad: See comment above for x_position" |
| 15 | 15 |
"dist",, |
| inputs/SALVIAS/maps/VegX.organisms.full.csv | ||
|---|---|---|
| 8 | 8 |
"Line","/*ID->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier", |
| 9 | 9 |
"Ind","/simpleUserdefined[name=authorPlantCode]/value","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
| 10 | 10 |
"ind_id",,"Brad: OMIT" |
| 11 |
"tag1","/*ID->/*s/individualOrganism/identificationLabel","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once." |
|
| 12 |
"tag2","/simpleUserdefined[name=identificationLabel2]/value","Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 11 |
"tag1","/*ID->/*s/individualOrganism/identificationLabel[@id=1]","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."
|
|
| 12 |
"tag2","/*ID->/*s/individualOrganism/identificationLabel[@id=2]","Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
|
|
| 13 | 13 |
"x_position","/relativePlotPosition/relativeX","Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX." |
| 14 | 14 |
"y_position","/relativePlotPosition/relativeY","Brad: See comment above for x_position" |
| 15 | 15 |
"dist",, |
| inputs/SALVIAS/maps/VegX.stems.csv | ||
|---|---|---|
| 7 | 7 |
"stem_dbh","/diameterBaseDistance[baseDistance[!attributeID]/value=1.37]/diameter", |
| 8 | 8 |
"gentry_dbh","/diameterBaseDistance[baseDistance[*ID/*s/attribute/quantitative/*ID/*s/method(/name=Gentry)]/value=1.37]/diameter", |
| 9 | 9 |
"stem_notes","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text", |
| 10 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel", |
|
| 11 |
"stem_tag2","/simpleUserdefined[name=identificationLabel2]/value",
|
|
| 10 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel[@id=1]",
|
|
| 11 |
"stem_tag2","/*ID->/*s/individualOrganism/identificationLabel[@id=2]",
|
|
| 12 | 12 |
"stem_height_m","/simpleUserdefined[name=height]/value", |
| 13 | 13 |
"stem_height_first_branch_m","/simpleUserdefined[name=heightFirstBranch]/value", |
| 14 | 14 |
"stem_canopy_form","/simpleUserdefined[name=canopyForm]/value", |
| inputs/SALVIAS/maps/VegX.stems.full.csv | ||
|---|---|---|
| 7 | 7 |
"stem_dbh","/diameterBaseDistance[baseDistance[!attributeID]/value=1.37]/diameter", |
| 8 | 8 |
"gentry_dbh","/diameterBaseDistance[baseDistance[*ID/*s/attribute/quantitative/*ID/*s/method(/name=Gentry)]/value=1.37]/diameter", |
| 9 | 9 |
"stem_notes","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text", |
| 10 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel", |
|
| 11 |
"stem_tag2","/simpleUserdefined[name=identificationLabel2]/value",
|
|
| 10 |
"stem_tag1","/*ID->/*s/individualOrganism/identificationLabel[@id=1]",
|
|
| 11 |
"stem_tag2","/*ID->/*s/individualOrganism/identificationLabel[@id=2]",
|
|
| 12 | 12 |
"stem_height_m","/simpleUserdefined[name=height]/value", |
| 13 | 13 |
"stem_height_first_branch_m","/simpleUserdefined[name=heightFirstBranch]/value", |
| 14 | 14 |
"stem_canopy_form","/simpleUserdefined[name=canopyForm]/value", |
| mappings/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 77 | 77 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=heightFirstBranch]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch, |
| 78 | 78 |
/simpleUserdefined[name=heightFirstBranch]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch, |
| 79 | 79 |
/simpleUserdefined[name=heightFirstBranch]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/heightfirstbranch, |
| 80 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/identificationLabel,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2 |
|
| 81 |
/*ID->/*s/individualOrganism/identificationLabel,"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2 |
|
| 82 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=identificationLabel2]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
|
|
| 83 |
/simpleUserdefined[name=identificationLabel2]/value,/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
|
|
| 80 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/identificationLabel[@id=1],"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
|
|
| 81 |
/*ID->/*s/individualOrganism/identificationLabel[@id=1],"/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
|
|
| 82 |
->/*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/identificationLabel[@id=2],/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
|
|
| 83 |
/*ID->/*s/individualOrganism/identificationLabel[@id=2],/aggregateoccurrence/*_id/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
|
|
| 84 | 84 |
/relativePlotPosition/relativeX,/aggregateoccurrence/*_id/plantobservation/stemobservation/xposition, |
| 85 | 85 |
/relativePlotPosition/relativeY,/aggregateoccurrence/*_id/plantobservation/stemobservation/yposition, |
| 86 | 86 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/aggregateOrganismObservation[*ID]/*/aggregateValue/value,/aggregateoccurrence/count, |
| mappings/for_review/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 77 | 77 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=heightFirstBranch]/value,//stemobservation/heightfirstbranch, |
| 78 | 78 |
/simpleUserdefined[name=heightFirstBranch]/value,//stemobservation/heightfirstbranch, |
| 79 | 79 |
/simpleUserdefined[name=heightFirstBranch]/value,//stemobservation/heightfirstbranch, |
| 80 |
//individualOrganism/identificationLabel,"//stemobservation/stemtag[""""/2=true]/tag",Quotes sort it before tag2 |
|
| 81 |
//individualOrganism/identificationLabel,"//stemobservation/stemtag[""""/2=true]/tag",Quotes sort it before tag2 |
|
| 82 |
//*s/individualOrganismObservation[relatedItem[relationshipType=stemParent]/relatedItemID]/simpleUserdefined[name=identificationLabel2]/value,//stemobservation/stemtag[iscurrent=true]:[../stemtag?[2=true]/1=false]/tag,
|
|
| 83 |
/simpleUserdefined[name=identificationLabel2]/value,//stemobservation/stemtag[iscurrent=true]:[../stemtag?[2=true]/1=false]/tag,
|
|
| 80 |
//individualOrganism/identificationLabel[@id=1],"//stemobservation/stemtag[""""/2=true]/tag",Quotes sort it before tag2
|
|
| 81 |
//individualOrganism/identificationLabel[@id=1],"//stemobservation/stemtag[""""/2=true]/tag",Quotes sort it before tag2
|
|
| 82 |
//individualOrganism/identificationLabel[@id=2],//stemobservation/stemtag[iscurrent=true]:[../stemtag?[2=true]/1=false]/tag,
|
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| 83 |
//individualOrganism/identificationLabel[@id=2],//stemobservation/stemtag[iscurrent=true]:[../stemtag?[2=true]/1=false]/tag,
|
|
| 84 | 84 |
//relativePlotPosition/relativeX,//stemobservation/xposition, |
| 85 | 85 |
//relativePlotPosition/relativeY,//stemobservation/yposition, |
| 86 | 86 |
//*s/aggregateOrganismObservation/*/aggregateValue/value,//aggregateoccurrence/count, |
| mappings/for_review/VegX-VegBIEN.stems.csv | ||
|---|---|---|
| 10 | 10 |
/diameterBaseDistance[baseDistance[]/value=1.37]/diameter,/diameterbreastheight, |
| 11 | 11 |
/simpleUserdefined[name=height]/value,/height, |
| 12 | 12 |
/simpleUserdefined[name=heightFirstBranch]/value,/heightfirstbranch, |
| 13 |
//individualOrganism/identificationLabel,"/stemtag[""""/2=true]/tag",Quotes sort it before tag2 |
|
| 14 |
/simpleUserdefined[name=identificationLabel2]/value,/stemtag[iscurrent=true]:[../stemtag?[2=true]/1=false]/tag, |
|
| 13 |
//individualOrganism/identificationLabel[@id=1],"/stemtag[""""/2=true]/tag",Quotes sort it before tag2 |
|
| 14 |
//individualOrganism/identificationLabel[@id=2],/stemtag[iscurrent=true]:[../stemtag?[2=true]/1=false]/tag, |
|
| mappings/VegX-VegBIEN.stems.csv | ||
|---|---|---|
| 10 | 10 |
/diameterBaseDistance[baseDistance[!attributeID]/value=1.37]/diameter,/diameterbreastheight, |
| 11 | 11 |
/simpleUserdefined[name=height]/value,/height, |
| 12 | 12 |
/simpleUserdefined[name=heightFirstBranch]/value,/heightfirstbranch, |
| 13 |
/*ID->/*s/individualOrganism/identificationLabel,"/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2 |
|
| 14 |
/simpleUserdefined[name=identificationLabel2]/value,/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag, |
|
| 13 |
/*ID->/*s/individualOrganism/identificationLabel[@id=1],"/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2 |
|
| 14 |
/*ID->/*s/individualOrganism/identificationLabel[@id=2],/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag, |
|
Also available in: Unified diff
VegX-VegBIEN.organisms.csv: Renamed individualOrganismObservation user-defined field identificationLabel2 to identificationLabel. Distinguish what are now two identificationLabel fields of the same name by tagging each one with [@id=2] or [@id=1]. inputs/SALVIAS-CSV/maps/VegX.organisms.csv: Merge tag1/stem_tag1 and tag2/stem_tag2 using _alt, since they are never set to different values when both are not NULL (although sometimes just one or just the other is not NULL).