input.Makefile: Maps building: full via maps (maps/$(via).%.full.csv): $(makeFullCsv): Sort all maps so that rows are re-ordered whether or not a core self map exists. This way, if a core self map is created, it will not cause the sort order of the generated via-format XMLs to change. This makes it easier to accept any changes to test outputs that result from adding a core self map.

mappings/Makefile: VegX: Added VegX.self.organisms.csv. Added root attrs to chRoot maps, commented out since it's not ready to be checked in yet.

xpath.py: get(): Run xml_dom.by_tag_name() with ignore_namespace=False (possibly later set to True)

xml_dom.py: Comments: Added clean_comment() and mk_comment(). Searching child nodes: by_tag_name(): Added ignore_namespace option to ignore namespace of node name.

root Makefile: Added %-remake target

mappings/Makefile: Renamed joinMaps to dwcMaps and chrootMaps to vegxMaps. Added commented-out code to create VegX.self.organisms.csv (not ready to check in yet because it affects many dependent maps).

input.Makefile: Removed no longer needed $(noEmptyMap)

xml_func.py: process(): Use new xml_dom.mk_comment()

xml_dom.py: Added clean_comment() and mk_comment() to properly sanitize comment contents (comments can't contain '--')

Added inputs/TRTE