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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  bin 1800 over 12 years Aaron Marcuse-Kubitza join: Also print "No join mapping" warning if a...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 1821 over 12 years Aaron Marcuse-Kubitza input.Makefile: Vars/functions: Make: $(subMake...
  lib 1815 over 12 years Aaron Marcuse-Kubitza xpath.py: get(): Run xml_dom.by_tag_name() with...
  mappings 1823 over 12 years Aaron Marcuse-Kubitza mappings/Makefile: VegX-VegBIEN.stems.csv: Remo...
  schemas 1751 over 12 years Aaron Marcuse-Kubitza vegbien.ERD.mwb: Fixed lines
  to_do 811 almost 13 years Aaron Marcuse-Kubitza Added to_do/milestones.doc
Makefile 7.68 KB 1813 over 12 years Aaron Marcuse-Kubitza root Makefile: Added %-remake target
README.TXT 2.58 KB 1774 over 12 years Aaron Marcuse-Kubitza README.TXT: Schema changes: Split updating grap...
map 867 Bytes 1299 almost 13 years Aaron Marcuse-Kubitza map: On nimoy, use bien2_staging unless otherwi...

Latest revisions

# Date Author Comment
1823 04/10/2012 12:19 PM Aaron Marcuse-Kubitza

mappings/Makefile: VegX-VegBIEN.stems.csv: Removed $(rootAttrs) from out root because stems don't use tcs namespace elements (stems don't have taxonDeterminations separate from the main organism)

1822 04/10/2012 12:13 PM Aaron Marcuse-Kubitza

VegX mappings: taxonConcept mappings: Added "tcs:" namespace prefix to appropriate elements. This will make the taxonConcept XPaths compatible with CTFS VegX.

1821 04/09/2012 06:52 PM Aaron Marcuse-Kubitza

input.Makefile: Vars/functions: Make: $(subMake): When forwarding to another dir based off of $(root), forward to $(root) rather than directly to the dir of the target. This ensures that any special targets that are only defined in the root Makefile still get run, even when the target is in a subdir with its own Makefile.

1820 04/09/2012 06:41 PM Aaron Marcuse-Kubitza

inputs/CTFS/test: Accepted initial test outputs. A lot of leaves are still unmapped with the default mappings.

1819 04/09/2012 06:40 PM Aaron Marcuse-Kubitza

inputs/CTFS/maps: Added initial maps

1818 04/09/2012 06:39 PM Aaron Marcuse-Kubitza

VegX mappings: taxonConcept mappings: Added "tcs:" namespace prefix to appropriate elements. This will make the taxonConcept XPaths compatible with CTFS VegX.

1817 04/09/2012 06:13 PM Aaron Marcuse-Kubitza

input.Makefile: Maps building: full via maps (maps/$(via).%.full.csv): $(makeFullCsv): Sort all maps so that rows are re-ordered whether or not a core self map exists. This way, if a core self map is created, it will not cause the sort order of the generated via-format XMLs to change. This makes it easier to accept any changes to test outputs that result from adding a core self map.

1816 04/09/2012 05:53 PM Aaron Marcuse-Kubitza

mappings/Makefile: VegX: Added VegX.self.organisms.csv. Added root attrs to chRoot maps, commented out since it's not ready to be checked in yet.

1815 04/09/2012 05:34 PM Aaron Marcuse-Kubitza

xpath.py: get(): Run xml_dom.by_tag_name() with ignore_namespace=False (possibly later set to True)

1814 04/09/2012 05:32 PM Aaron Marcuse-Kubitza

xml_dom.py: Comments: Added clean_comment() and mk_comment(). Searching child nodes: by_tag_name(): Added ignore_namespace option to ignore namespace of node name.

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