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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  bin 1851 over 12 years Aaron Marcuse-Kubitza bin/map: Don't import pp unless cpus != 0 becau...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 1843 over 12 years Aaron Marcuse-Kubitza mappings: Build VegX-VegBIEN.organisms.csv from...
  lib 1850 over 12 years Aaron Marcuse-Kubitza sql.py: pkey(): Use pkeys cache from db object ...
  mappings 1843 over 12 years Aaron Marcuse-Kubitza mappings: Build VegX-VegBIEN.organisms.csv from...
  schemas 1751 over 12 years Aaron Marcuse-Kubitza vegbien.ERD.mwb: Fixed lines
  to_do 811 almost 13 years Aaron Marcuse-Kubitza Added to_do/milestones.doc
Makefile 7.72 KB 1845 over 12 years Aaron Marcuse-Kubitza root Makefile: python-Linux: Added `sudo pip in...
README.TXT 2.58 KB 1774 over 12 years Aaron Marcuse-Kubitza README.TXT: Schema changes: Split updating grap...
map 867 Bytes 1299 over 12 years Aaron Marcuse-Kubitza map: On nimoy, use bien2_staging unless otherwi...

Latest revisions

# Date Author Comment
1851 04/13/2012 02:56 PM Aaron Marcuse-Kubitza

bin/map: Don't import pp unless cpus != 0 because it's slow and doesn't need to happen if we're not using parallelization. cpus option defaults to 0 in test mode so tests run faster.

1850 04/13/2012 02:52 PM Aaron Marcuse-Kubitza

sql.py: pkey(): Use pkeys cache from db object instead of parameter

1849 04/13/2012 02:44 PM Aaron Marcuse-Kubitza

sql.py: Wrapped db connection inside an object that can also store the cache of the pkeys and index_cols

1848 04/13/2012 02:27 PM Aaron Marcuse-Kubitza

bin/map: If cpus is 0, run without Parallel Python

1847 04/13/2012 02:19 PM Aaron Marcuse-Kubitza

bin/map: Set up Parallel Python with an env-var-customizable # CPUs

1846 04/13/2012 02:18 PM Aaron Marcuse-Kubitza

bin/map: Set up Parallel Python with an env-var-customizable # CPUs

1845 04/13/2012 12:58 PM Aaron Marcuse-Kubitza

root Makefile: python-Linux: Added `sudo pip install pp`

1844 04/13/2012 12:47 PM Aaron Marcuse-Kubitza

root Makefile: python-Linux: Added python-parallel to installs

1843 04/13/2012 12:19 PM Aaron Marcuse-Kubitza

mappings: Build VegX-VegBIEN.organisms.csv from VegX-VegBIEN.stems.csv instead of vice versa. This entails switching the roots around so stem points to organism instead of the other way around, which is a complex operation. Re-rooted VegX-VegBIEN.organisms.csv at /plantobservation instead of /taxonoccurrence to avoid traveling up the hierarchy to taxonoccurrence and back down again to plantobservation, etc. as would otherwise have been the case.

1842 04/13/2012 11:43 AM Aaron Marcuse-Kubitza

bin/map: When determining if outer elements are types, look for /*s/ anywhere in the string instead of just at the beginning, because there might be root attrs (namespaces), etc. before it

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